RNA–Protein interactions for RNA: ENST00000392088.6

TUBA4A-202, Transcript of tubulin alpha 4a, humanhuman

TSL 2 BASIC

Gene TUBA4A, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-202ENST00000392088 SYNE4Q8N205 404 aa22.71■■□□□ 1.23
TUBA4A-202ENST00000392088 MAP3K14Q99558 947 aa22.71■■□□□ 1.23
TUBA4A-202ENST00000392088 ANGEL1Q9UNK9 670 aaKnown RBP22.71■■□□□ 1.23
TUBA4A-202ENST00000392088 ZNF330Q9Y3S2 320 aaPredicted RBP22.71■■□□□ 1.23
TUBA4A-202ENST00000392088 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.71■■□□□ 1.234e-8■□□□□ 9
TUBA4A-202ENST00000392088 PLEKHG2Q9H7P9 1386 aa22.7■■□□□ 1.23
TUBA4A-202ENST00000392088 METAP2P50579 478 aaKnown RBP eCLIP22.7■■□□□ 1.22
TUBA4A-202ENST00000392088 TERF2Q15554 542 aa22.7■■□□□ 1.22
TUBA4A-202ENST00000392088 FOXP4Q8IVH2 680 aaPredicted RBP22.7■■□□□ 1.22
TUBA4A-202ENST00000392088 TCIRG1Q13488 830 aa22.7■■□□□ 1.22
TUBA4A-202ENST00000392088 HOMER1Q86YM7 354 aa22.7■■□□□ 1.22
TUBA4A-202ENST00000392088 SH2B2O14492 632 aaPredicted RBP22.69■■□□□ 1.22
TUBA4A-202ENST00000392088 TRIM65Q6PJ69 517 aa22.69■■□□□ 1.22
TUBA4A-202ENST00000392088 METTL16Q86W50 562 aaKnown RBP22.69■■□□□ 1.22
TUBA4A-202ENST00000392088 DNAI1Q9UI46 699 aa22.69■■□□□ 1.22
TUBA4A-202ENST00000392088 RIC1Q4ADV7 1423 aa22.69■■□□□ 1.22
TUBA4A-202ENST00000392088 PPP6R2O75170 966 aa22.69■■□□□ 1.22
TUBA4A-202ENST00000392088 SERPINC1P01008 464 aa22.69■■□□□ 1.22
TUBA4A-202ENST00000392088 ETF1P62495 437 aaKnown RBP22.69■■□□□ 1.22
TUBA4A-202ENST00000392088 MYL5Q02045 173 aa22.69■■□□□ 1.22
TUBA4A-202ENST00000392088 TAF7LQ5H9L4 462 aa22.69■■□□□ 1.22
TUBA4A-202ENST00000392088 ZCRB1Q8TBF4 217 aaKnown RBP22.69■■□□□ 1.22
TUBA4A-202ENST00000392088 B4E1Z4 1266 aa22.68■■□□□ 1.22
TUBA4A-202ENST00000392088 ADD2P35612 726 aa22.68■■□□□ 1.22
TUBA4A-202ENST00000392088 LONRF3Q496Y0 759 aa22.68■■□□□ 1.22
TUBA4A-202ENST00000392088 APOA5Q6Q788 366 aa22.68■■□□□ 1.22
TUBA4A-202ENST00000392088 MICU3Q86XE3 530 aa22.68■■□□□ 1.22
TUBA4A-202ENST00000392088 TMX1Q9H3N1 280 aa22.68■■□□□ 1.22
TUBA4A-202ENST00000392088 INCENPQ9NQS7 918 aa22.68■■□□□ 1.22
TUBA4A-202ENST00000392088 TRDNQ13061 729 aa22.68■■□□□ 1.22
TUBA4A-202ENST00000392088 CFAP100Q494V2 611 aa22.68■■□□□ 1.22
TUBA4A-202ENST00000392088 RESP18Q5W5W9 173 aa22.68■■□□□ 1.22
TUBA4A-202ENST00000392088 MYL10Q9BUA6 226 aa22.68■■□□□ 1.22
TUBA4A-202ENST00000392088 FOXN1O15353 648 aa22.67■■□□□ 1.22
TUBA4A-202ENST00000392088 RANBP6O60518 1105 aaKnown RBP22.67■■□□□ 1.22
TUBA4A-202ENST00000392088 CLCN6P51797 869 aa22.67■■□□□ 1.22
TUBA4A-202ENST00000392088 PDE4BQ07343 736 aa22.67■■□□□ 1.22
TUBA4A-202ENST00000392088 REXO1L1PQ8IX06 675 aa22.67■■□□□ 1.22
TUBA4A-202ENST00000392088 UTP14AQ9BVJ6 771 aaKnown RBP22.67■■□□□ 1.22
TUBA4A-202ENST00000392088 FANCLQ9NW38 375 aa22.67■■□□□ 1.22
TUBA4A-202ENST00000392088 FBXO3Q9UK99 471 aa22.67■■□□□ 1.22
TUBA4A-202ENST00000392088 PAPPAQ13219 1627 aa22.67■■□□□ 1.22
TUBA4A-202ENST00000392088 FAM237AA0A1B0GTK4 181 aa22.67■■□□□ 1.22
TUBA4A-202ENST00000392088 ERVV-2B6SEH9 535 aa22.67■■□□□ 1.22
TUBA4A-202ENST00000392088 NRDCO43847 1150 aa22.67■■□□□ 1.22
TUBA4A-202ENST00000392088 CSF1RP07333 972 aa22.67■■□□□ 1.22
TUBA4A-202ENST00000392088 BMP6P22004 513 aa22.67■■□□□ 1.22
TUBA4A-202ENST00000392088 IFIT5Q13325 482 aaKnown RBP22.67■■□□□ 1.22
TUBA4A-202ENST00000392088 NTRK3Q16288 839 aa22.67■■□□□ 1.22
TUBA4A-202ENST00000392088 SLC9C2Q5TAH2 1124 aa22.67■■□□□ 1.22
TUBA4A-202ENST00000392088 PIH1D3Q9NQM4 214 aaKnown RBP22.67■■□□□ 1.22
TUBA4A-202ENST00000392088 INTS13Q9NVM9 706 aa22.67■■□□□ 1.22
TUBA4A-202ENST00000392088 PCDH11XQ9BZA7 1347 aa22.66■■□□□ 1.22
TUBA4A-202ENST00000392088 PCDH11YQ9BZA8 1340 aa22.66■■□□□ 1.22
TUBA4A-202ENST00000392088 ATF3P18847 181 aa22.66■■□□□ 1.22
TUBA4A-202ENST00000392088 GNL2Q13823 731 aaKnown RBP22.66■■□□□ 1.22
TUBA4A-202ENST00000392088 VSTM4Q8IW00 320 aa22.66■■□□□ 1.22
TUBA4A-202ENST00000392088 FAM217BQ9NTX9 383 aaPredicted RBP22.66■■□□□ 1.22
TUBA4A-202ENST00000392088 ARHGAP29Q52LW3 1261 aa22.66■■□□□ 1.22
TUBA4A-202ENST00000392088 RIPOR2Q9Y4F9 1068 aa22.66■■□□□ 1.22
TUBA4A-202ENST00000392088 PCDHA5Q9Y5H7 936 aa22.66■■□□□ 1.22
TUBA4A-202ENST00000392088 ABCC12Q96J65 1359 aa22.65■■□□□ 1.22
TUBA4A-202ENST00000392088 APPP05067 770 aa22.65■■□□□ 1.22
TUBA4A-202ENST00000392088 DHX8Q14562 1220 aaKnown RBP22.65■■□□□ 1.22
TUBA4A-202ENST00000392088 HSP90AA4PQ58FG1 418 aa22.65■■□□□ 1.22
TUBA4A-202ENST00000392088 METTL24Q5JXM2 366 aa22.65■■□□□ 1.22
TUBA4A-202ENST00000392088 SPECC1Q5M775 1068 aa22.65■■□□□ 1.22
TUBA4A-202ENST00000392088 TNS3Q68CZ2 1445 aa22.65■■□□□ 1.22
TUBA4A-202ENST00000392088 PHLPP2Q6ZVD8 1323 aa22.65■■□□□ 1.22
TUBA4A-202ENST00000392088 PCCAP05165 728 aaPredicted RBP22.65■■□□□ 1.22
TUBA4A-202ENST00000392088 KRBA2Q6ZNG9 492 aa22.65■■□□□ 1.22
TUBA4A-202ENST00000392088 JMYQ8N9B5 988 aa22.65■■□□□ 1.22
TUBA4A-202ENST00000392088 IGDCC4Q8TDY8 1250 aa22.65■■□□□ 1.22
TUBA4A-202ENST00000392088 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.65■■□□□ 1.22
TUBA4A-202ENST00000392088 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.65■■□□□ 1.22
TUBA4A-202ENST00000392088 FHOD1Q9Y613 1164 aa22.65■■□□□ 1.22
TUBA4A-202ENST00000392088 TMEM139Q8IV31 216 aa22.64■■□□□ 1.21
TUBA4A-202ENST00000392088 UBN2Q6ZU65 1347 aa22.64■■□□□ 1.21
TUBA4A-202ENST00000392088 CBFA2T2O43439 604 aa22.64■■□□□ 1.21
TUBA4A-202ENST00000392088 PLA2G12BQ9BX93 195 aa22.64■■□□□ 1.21
TUBA4A-202ENST00000392088 IDH1O75874 414 aaKnown RBP22.63■■□□□ 1.21
TUBA4A-202ENST00000392088 CDKL5O76039 1030 aa22.63■■□□□ 1.21
TUBA4A-202ENST00000392088 TUBB4AP04350 444 aa22.63■■□□□ 1.21
TUBA4A-202ENST00000392088 TOP1P11387 765 aaKnown RBP22.63■■□□□ 1.21
TUBA4A-202ENST00000392088 IARSP41252 1262 aaKnown RBP22.63■■□□□ 1.21
TUBA4A-202ENST00000392088 CNNM3Q8NE01 707 aa22.63■■□□□ 1.21
TUBA4A-202ENST00000392088 RGS22Q8NE09 1264 aa22.63■■□□□ 1.21
TUBA4A-202ENST00000392088 KCNH3Q9ULD8 1083 aa22.63■■□□□ 1.21
TUBA4A-202ENST00000392088 ZNF532Q9HCE3 1301 aa22.63■■□□□ 1.21
TUBA4A-202ENST00000392088 ZBTB43O43298 467 aa22.63■■□□□ 1.21
TUBA4A-202ENST00000392088 GREM2Q9H772 168 aa22.63■■□□□ 1.21
TUBA4A-202ENST00000392088 LY9Q9HBG7 655 aa22.63■■□□□ 1.21
TUBA4A-202ENST00000392088 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.63■■□□□ 1.21
TUBA4A-202ENST00000392088 CUTAO60888 179 aa22.62■■□□□ 1.21
TUBA4A-202ENST00000392088 GRIN1Q05586 938 aa22.62■■□□□ 1.21
TUBA4A-202ENST00000392088 TRIM28Q13263 835 aaKnown RBP22.62■■□□□ 1.21
TUBA4A-202ENST00000392088 CCDC102BQ68D86 513 aa22.62■■□□□ 1.21
TUBA4A-202ENST00000392088 OLFM4Q6UX06 510 aa22.62■■□□□ 1.21
TUBA4A-202ENST00000392088 LDHAL6AQ6ZMR3 332 aa22.62■■□□□ 1.21
TUBA4A-202ENST00000392088 TOM1L2Q6ZVM7 507 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms