RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 BTDP43251 543 aa18.28■□□□□ 0.52
IGHV3-53-201ENST00000390627 RASA3Q14644 834 aa18.28■□□□□ 0.52
IGHV3-53-201ENST00000390627 CDC42EP5Q6NZY7 148 aa18.28■□□□□ 0.52
IGHV3-53-201ENST00000390627 C2orf69Q8N8R5 385 aa18.28■□□□□ 0.52
IGHV3-53-201ENST00000390627 NOL10Q9BSC4 688 aaKnown RBP18.28■□□□□ 0.52
IGHV3-53-201ENST00000390627 GBA2Q9HCG7 927 aaPredicted RBP18.28■□□□□ 0.52
IGHV3-53-201ENST00000390627 PAG1Q9NWQ8 432 aa18.28■□□□□ 0.52
IGHV3-53-201ENST00000390627 GPR75-ASB3A0A0A6YYF3 556 aa18.27■□□□□ 0.52
IGHV3-53-201ENST00000390627 ERC2O15083 957 aa18.27■□□□□ 0.52
IGHV3-53-201ENST00000390627 FKBP1BP68106 108 aa18.27■□□□□ 0.52
IGHV3-53-201ENST00000390627 PRAMEF18Q5VWM3 479 aa18.27■□□□□ 0.52
IGHV3-53-201ENST00000390627 FAM83AQ86UY5 434 aa18.27■□□□□ 0.52
IGHV3-53-201ENST00000390627 USP40Q9NVE5 1235 aa18.27■□□□□ 0.52
IGHV3-53-201ENST00000390627 TLL2Q9Y6L7 1015 aa18.27■□□□□ 0.52
IGHV3-53-201ENST00000390627 DOCK2Q92608 1830 aa18.27■□□□□ 0.52
IGHV3-53-201ENST00000390627 MAP4K4O95819 1239 aaPredicted RBP18.26■□□□□ 0.51
IGHV3-53-201ENST00000390627 MX1P20591 662 aa18.26■□□□□ 0.51
IGHV3-53-201ENST00000390627 CACNB3P54284 484 aa18.26■□□□□ 0.51
IGHV3-53-201ENST00000390627 SUPT20HL1Q3ZLR7 823 aa18.26■□□□□ 0.51
IGHV3-53-201ENST00000390627 B4GALNT3Q6L9W6 998 aa18.26■□□□□ 0.51
IGHV3-53-201ENST00000390627 LNPKQ9C0E8 428 aa18.26■□□□□ 0.51
IGHV3-53-201ENST00000390627 PAPPA2Q9BXP8 1791 aa18.26■□□□□ 0.51
IGHV3-53-201ENST00000390627 GLRX3O76003 335 aaKnown RBP18.25■□□□□ 0.51
IGHV3-53-201ENST00000390627 BAG3O95817 575 aa18.25■□□□□ 0.51
IGHV3-53-201ENST00000390627 NEFLP07196 543 aa18.25■□□□□ 0.51
IGHV3-53-201ENST00000390627 CYP7A1P22680 504 aa18.25■□□□□ 0.51
IGHV3-53-201ENST00000390627 SAPCD2Q86UD0 394 aa18.25■□□□□ 0.51
IGHV3-53-201ENST00000390627 MAGEB6Q8N7X4 407 aa18.25■□□□□ 0.51
IGHV3-53-201ENST00000390627 RPAP1Q9BWH6 1393 aaPredicted RBP18.25■□□□□ 0.51
IGHV3-53-201ENST00000390627 MYO5AQ9Y4I1 1855 aaKnown RBP18.24■□□□□ 0.51
IGHV3-53-201ENST00000390627 RASSF10A6NK89 507 aa18.24■□□□□ 0.51
IGHV3-53-201ENST00000390627 PLCG2P16885 1265 aa18.24■□□□□ 0.51
IGHV3-53-201ENST00000390627 NUCB1Q02818 461 aa18.24■□□□□ 0.51
IGHV3-53-201ENST00000390627 TSHZ3Q63HK5 1081 aa18.24■□□□□ 0.51
IGHV3-53-201ENST00000390627 CHD1LQ86WJ1 897 aa18.24■□□□□ 0.51
IGHV3-53-201ENST00000390627 CERS3Q8IU89 383 aa18.24■□□□□ 0.51
IGHV3-53-201ENST00000390627 OTUD7AQ8TE49 926 aaPredicted RBP18.24■□□□□ 0.51
IGHV3-53-201ENST00000390627 EDC3Q96F86 508 aaKnown RBP18.24■□□□□ 0.51
IGHV3-53-201ENST00000390627 IDI2Q9BXS1 227 aa18.24■□□□□ 0.51
IGHV3-53-201ENST00000390627 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.24■□□□□ 0.51
IGHV3-53-201ENST00000390627 TMEM39BQ9GZU3 492 aa18.24■□□□□ 0.51
IGHV3-53-201ENST00000390627 CNTNAP1P78357 1384 aa18.24■□□□□ 0.51
IGHV3-53-201ENST00000390627 SALL3Q9BXA9 1300 aa18.23■□□□□ 0.51
IGHV3-53-201ENST00000390627 RFX7Q2KHR2 1363 aa18.23■□□□□ 0.51
IGHV3-53-201ENST00000390627 HUNKP57058 714 aa18.23■□□□□ 0.51
IGHV3-53-201ENST00000390627 RHBDL3P58872 404 aa18.23■□□□□ 0.51
IGHV3-53-201ENST00000390627 TTLL12Q14166 644 aaPredicted RBP18.23■□□□□ 0.51
IGHV3-53-201ENST00000390627 DEFB115Q30KQ5 88 aa18.23■□□□□ 0.51
IGHV3-53-201ENST00000390627 ARMC9Q7Z3E5 817 aa18.23■□□□□ 0.51
IGHV3-53-201ENST00000390627 PI4K2BQ8TCG2 481 aa18.23■□□□□ 0.51
IGHV3-53-201ENST00000390627 FAM151AQ8WW52 585 aa18.23■□□□□ 0.51
IGHV3-53-201ENST00000390627 HOOK2Q96ED9 719 aa18.23■□□□□ 0.51
IGHV3-53-201ENST00000390627 HHIPL1Q96JK4 782 aa18.23■□□□□ 0.51
IGHV3-53-201ENST00000390627 MKRN1Q9UHC7 482 aaKnown RBP18.23■□□□□ 0.51
IGHV3-53-201ENST00000390627 PPP1R12BO60237 982 aaPredicted RBP18.22■□□□□ 0.51
IGHV3-53-201ENST00000390627 ENTPD3O75355 529 aa18.22■□□□□ 0.51
IGHV3-53-201ENST00000390627 PDE6AP16499 860 aa18.22■□□□□ 0.51
IGHV3-53-201ENST00000390627 PPP4CP60510 307 aa18.22■□□□□ 0.51
IGHV3-53-201ENST00000390627 NFIAQ12857 509 aa18.22■□□□□ 0.51
IGHV3-53-201ENST00000390627 NBPF12Q5TAG4 269 aaPredicted RBP18.22■□□□□ 0.51
IGHV3-53-201ENST00000390627 SLC9C2Q5TAH2 1124 aa18.22■□□□□ 0.51
IGHV3-53-201ENST00000390627 KLRG1Q96E93 195 aa18.22■□□□□ 0.51
IGHV3-53-201ENST00000390627 TEPSINQ96N21 525 aa18.22■□□□□ 0.51
IGHV3-53-201ENST00000390627 AATFQ9NY61 560 aaKnown RBP eCLIP18.22■□□□□ 0.51
IGHV3-53-201ENST00000390627 STAP2Q9UGK3 403 aa18.22■□□□□ 0.51
IGHV3-53-201ENST00000390627 SSC5DA1L4H1 1573 aa18.21■□□□□ 0.51
IGHV3-53-201ENST00000390627 WDHD1O75717 1129 aaPredicted RBP18.21■□□□□ 0.51
IGHV3-53-201ENST00000390627 RGS3P49796 1198 aa18.21■□□□□ 0.51
IGHV3-53-201ENST00000390627 PDE1AP54750 535 aa18.21■□□□□ 0.51
IGHV3-53-201ENST00000390627 TCP10Q12799 353 aa18.21■□□□□ 0.51
IGHV3-53-201ENST00000390627 ZSCAN25Q6NSZ9 544 aa18.21■□□□□ 0.51
IGHV3-53-201ENST00000390627 PAXIP1Q6ZW49 1069 aaPredicted RBP18.21■□□□□ 0.51
IGHV3-53-201ENST00000390627 ADGRA1Q86SQ6 560 aa18.21■□□□□ 0.51
IGHV3-53-201ENST00000390627 TEX11Q8IYF3 940 aa18.21■□□□□ 0.51
IGHV3-53-201ENST00000390627 DNAJC5GQ8N7S2 189 aa18.21■□□□□ 0.51
IGHV3-53-201ENST00000390627 FAM198AQ9UFP1 575 aa18.21■□□□□ 0.51
IGHV3-53-201ENST00000390627 NPM3O75607 178 aaKnown RBP18.2■□□□□ 0.5
IGHV3-53-201ENST00000390627 ADD2P35612 726 aa18.2■□□□□ 0.5
IGHV3-53-201ENST00000390627 ECE1P42892 770 aa18.2■□□□□ 0.5
IGHV3-53-201ENST00000390627 PICALMQ13492 652 aa18.2■□□□□ 0.5
IGHV3-53-201ENST00000390627 KBTBD3Q8NAB2 608 aa18.2■□□□□ 0.5
IGHV3-53-201ENST00000390627 ANGEL1Q9UNK9 670 aaKnown RBP18.2■□□□□ 0.5
IGHV3-53-201ENST00000390627 ZNF532Q9HCE3 1301 aa18.2■□□□□ 0.5
IGHV3-53-201ENST00000390627 PRKG1Q13976 671 aa18.19■□□□□ 0.5
IGHV3-53-201ENST00000390627 MAP3K11Q16584 847 aa18.19■□□□□ 0.5
IGHV3-53-201ENST00000390627 LRRFIP1Q32MZ4 808 aaKnown RBP18.19■□□□□ 0.5
IGHV3-53-201ENST00000390627 CDAN1Q8IWY9 1227 aa18.19■□□□□ 0.5
IGHV3-53-201ENST00000390627 MIGA1Q8NAN2 632 aa18.19■□□□□ 0.5
IGHV3-53-201ENST00000390627 SH3RF3Q8TEJ3 882 aaPredicted RBP18.19■□□□□ 0.5
IGHV3-53-201ENST00000390627 TCRBV5S4A2TA0A5A2 114 aa18.18■□□□□ 0.5
IGHV3-53-201ENST00000390627 IREB2P48200 963 aaKnown RBP18.18■□□□□ 0.5
IGHV3-53-201ENST00000390627 UBE3CQ15386 1083 aa18.18■□□□□ 0.5
IGHV3-53-201ENST00000390627 DCAF15Q66K64 600 aa18.18■□□□□ 0.5
IGHV3-53-201ENST00000390627 RGMBQ6NW40 437 aa18.18■□□□□ 0.5
IGHV3-53-201ENST00000390627 MOB2Q70IA6 237 aa18.18■□□□□ 0.5
IGHV3-53-201ENST00000390627 ZSCAN29Q8IWY8 852 aaPredicted RBP18.18■□□□□ 0.5
IGHV3-53-201ENST00000390627 DDX4Q9NQI0 724 aaKnown RBP18.18■□□□□ 0.5
IGHV3-53-201ENST00000390627 MYH7P12883 1935 aa18.17■□□□□ 0.5
IGHV3-53-201ENST00000390627 MAGEB6P1A0A0J9YX57 407 aa18.17■□□□□ 0.5
IGHV3-53-201ENST00000390627 UBE2Q2LH0YL09 131 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms