RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 ACBD5Q5T8D3 534 aaPredicted RBP7.06□□□□□ -1.28
ERCC4-202ENST00000389138 CC2D1AQ6P1N0 951 aaPredicted RBP7.06□□□□□ -1.28
ERCC4-202ENST00000389138 ZBTB33Q86T24 672 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 SIX5Q8N196 739 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 TTC8Q8TAM2 541 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 E2F7Q96AV8 911 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 GPRASP2Q96D09 838 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 ZNF700Q9H0M5 742 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 TMX1Q9H3N1 280 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 RRP7BPQ9NSQ0 103 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 NUB1Q9Y5A7 615 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 UNC13BO14795 1591 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 LAMC1P11047 1609 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 SFI1A8K8P3 1242 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 KCNQ2O43526 872 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 RNASEH2AO75792 299 aaKnown RBP7.06□□□□□ -1.28
ERCC4-202ENST00000389138 MPSTP25325 297 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 TRAPPC10P48553 1259 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 EPHB1P54762 984 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 DDX46Q7L014 1031 aaKnown RBP7.06□□□□□ -1.28
ERCC4-202ENST00000389138 SUGP1Q8IWZ8 645 aaKnown RBP7.06□□□□□ -1.28
ERCC4-202ENST00000389138 TPCN2Q8NHX9 752 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 HELQQ8TDG4 1101 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 C1QTNF2Q9BXJ5 285 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 TMEM260Q9NX78 707 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 GGT7Q9UJ14 662 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 CDV3Q9UKY7 258 aaKnown RBP7.06□□□□□ -1.28
ERCC4-202ENST00000389138 PPP2R3BQ9Y5P8 575 aa7.06□□□□□ -1.28
ERCC4-202ENST00000389138 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.06□□□□□ -1.28
ERCC4-202ENST00000389138 PTPN23Q9H3S7 1636 aa7.05□□□□□ -1.28
ERCC4-202ENST00000389138 CCDC163A0A0D9SF12 145 aa7.05□□□□□ -1.28
ERCC4-202ENST00000389138 TMEM238LA0A1B0GVL6 79 aa7.05□□□□□ -1.28
ERCC4-202ENST00000389138 PRSS47A8MTI9 375 aa7.05□□□□□ -1.28
ERCC4-202ENST00000389138 ATF3P18847 181 aa7.05□□□□□ -1.28
ERCC4-202ENST00000389138 GNA15P30679 374 aa7.05□□□□□ -1.28
ERCC4-202ENST00000389138 RAB27AP51159 221 aa7.05□□□□□ -1.28
ERCC4-202ENST00000389138 GRAMD1BQ3KR37 738 aa7.05□□□□□ -1.28
ERCC4-202ENST00000389138 L1TD1Q5T7N2 865 aaKnown RBP7.05□□□□□ -1.28
ERCC4-202ENST00000389138 TRMT44Q8IYL2 757 aaKnown RBP7.05□□□□□ -1.28
ERCC4-202ENST00000389138 IFNL3Q8IZI9 196 aa7.05□□□□□ -1.28
ERCC4-202ENST00000389138 MYO1HQ8N1T3 1032 aa7.05□□□□□ -1.28
ERCC4-202ENST00000389138 IFT122Q9HBG6 1241 aa7.05□□□□□ -1.28
ERCC4-202ENST00000389138 PKD2L1Q9P0L9 805 aa7.05□□□□□ -1.28
ERCC4-202ENST00000389138 CEP126Q9P2H0 1117 aa7.05□□□□□ -1.28
ERCC4-202ENST00000389138 LEMD3Q9Y2U8 911 aa7.05□□□□□ -1.28
ERCC4-202ENST00000389138 TTC36A6NLP5 189 aa7.04□□□□□ -1.28
ERCC4-202ENST00000389138 TCERG1O14776 1098 aaKnown RBP7.04□□□□□ -1.28
ERCC4-202ENST00000389138 SLC26A4O43511 780 aa7.04□□□□□ -1.28
ERCC4-202ENST00000389138 NDUFB5O43674 189 aa7.04□□□□□ -1.28
ERCC4-202ENST00000389138 GDF9O60383 454 aa7.04□□□□□ -1.28
ERCC4-202ENST00000389138 SCP2P22307 547 aa7.04□□□□□ -1.28
ERCC4-202ENST00000389138 TRAF7Q6Q0C0 670 aa7.04□□□□□ -1.28
ERCC4-202ENST00000389138 KSR2Q6VAB6 950 aa7.04□□□□□ -1.28
ERCC4-202ENST00000389138 BRINP3Q76B58 766 aa7.04□□□□□ -1.28
ERCC4-202ENST00000389138 HS2ST1Q7LGA3 356 aa7.04□□□□□ -1.28
ERCC4-202ENST00000389138 HNRNPLLQ8WVV9 542 aaKnown RBP7.04□□□□□ -1.28
ERCC4-202ENST00000389138 FEZ1Q99689 392 aa7.04□□□□□ -1.28
ERCC4-202ENST00000389138 PNPLA6Q8IY17 1366 aa7.04□□□□□ -1.28
ERCC4-202ENST00000389138 ATRNO75882 1429 aa7.04□□□□□ -1.28
ERCC4-202ENST00000389138 BCL9LQ86UU0 1499 aa7.04□□□□□ -1.28
ERCC4-202ENST00000389138 COL22A1Q8NFW1 1626 aaPredicted RBP7.04□□□□□ -1.28
ERCC4-202ENST00000389138 CROCC2H7BZ55 1655 aa7.04□□□□□ -1.28
ERCC4-202ENST00000389138 TGFB3P10600 412 aa7.04□□□□□ -1.28
ERCC4-202ENST00000389138 DEKP35659 375 aaKnown RBP7.04□□□□□ -1.28
ERCC4-202ENST00000389138 FOXC1Q12948 553 aa7.04□□□□□ -1.28
ERCC4-202ENST00000389138 CASC1Q6TDU7 716 aa7.04□□□□□ -1.28
ERCC4-202ENST00000389138 DUOX2Q9NRD8 1548 aa7.04□□□□□ -1.28
ERCC4-202ENST00000389138 DCCP43146 1447 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 BLMP54132 1417 aaPredicted RBP7.03□□□□□ -1.28
ERCC4-202ENST00000389138 MAGEB6P1A0A0J9YX57 407 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 HIP1RO75146 1068 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 SSBP05455 408 aaKnown RBP eCLIP7.03□□□□□ -1.28
ERCC4-202ENST00000389138 KRT26Q7Z3Y9 468 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 NBPF11Q86T75 865 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 DDX42Q86XP3 938 aaKnown RBP eCLIP7.03□□□□□ -1.28
ERCC4-202ENST00000389138 HOMER1Q86YM7 354 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 SNIP1Q8TAD8 396 aaKnown RBP7.03□□□□□ -1.28
ERCC4-202ENST00000389138 RASGRP4Q8TDF6 673 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 MRGPRX2Q96LB1 330 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 TRIM55Q9BYV6 548 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 ZIM2Q9NZV7 527 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 SPG7Q9UQ90 795 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 DIS3Q9Y2L1 958 aaKnown RBP7.03□□□□□ -1.28
ERCC4-202ENST00000389138 SH3BP1Q9Y3L3 701 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 ZFYVE9O95405 1425 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 PLEKHG1Q9ULL1 1385 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 SIAH2O43255 324 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 PRPF3O43395 683 aaKnown RBP7.03□□□□□ -1.28
ERCC4-202ENST00000389138 FZD6O60353 706 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 WEE1P30291 646 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 LAPTM4AQ15012 233 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 ALDH1L2Q3SY69 923 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 C4orf48Q5BLP8 95 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 FAM83BQ5T0W9 1011 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 SLC4A10Q6U841 1118 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 ADAM32Q8TC27 787 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 FAM129BQ96TA1 746 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 SLC45A1Q9Y2W3 748 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 MAP4K5Q9Y4K4 846 aa7.03□□□□□ -1.28
ERCC4-202ENST00000389138 NALCNQ8IZF0 1738 aa7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms