RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 PSPNO60542 156 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 RNGTTO60942 597 aaKnown RBP1.34□□□□□ -2.19
SNORD28-201ENST00000384706 AOC2O75106 756 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 LIG1P18858 919 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 ITIH2P19823 946 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 FUT4P22083 530 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 MPSTP25325 297 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 CFPP27918 469 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 BUD31P41223 144 aaPredicted RBP1.34□□□□□ -2.19
SNORD28-201ENST00000384706 EIF1AXP47813 144 aaKnown RBP1.34□□□□□ -2.19
SNORD28-201ENST00000384706 GRIA4P48058 902 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 ZNF157P51786 506 aaPredicted RBP1.34□□□□□ -2.19
SNORD28-201ENST00000384706 PRKCQQ04759 706 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 MESP2Q0VG99 397 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 CDK5R2Q13319 367 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 MTMR3Q13615 1198 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 ELOAQ14241 798 aaKnown RBP1.34□□□□□ -2.19
SNORD28-201ENST00000384706 PDE3AQ14432 1141 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 ECM1Q16610 540 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 KRTAP19-4Q3LI73 84 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 HP1BP3Q5SSJ5 553 aaPredicted RBP1.34□□□□□ -2.19
SNORD28-201ENST00000384706 LILRA6Q6PI73 481 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 SEZ6L2Q6UXD5 910 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 ANKLE2Q86XL3 938 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 WFDC3Q8IUB2 231 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 ZSCAN18Q8TBC5 510 aaPredicted RBP1.34□□□□□ -2.19
SNORD28-201ENST00000384706 DDX54Q8TDD1 881 aaKnown RBP1.34□□□□□ -2.19
SNORD28-201ENST00000384706 HELQQ8TDG4 1101 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 GTF3C2Q8WUA4 911 aaPredicted RBP1.34□□□□□ -2.19
SNORD28-201ENST00000384706 CLP1Q92989 425 aaKnown RBP1.34□□□□□ -2.19
SNORD28-201ENST00000384706 MISP3Q96FF7 219 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 LIN37Q96GY3 246 aaPredicted RBP1.34□□□□□ -2.19
SNORD28-201ENST00000384706 HRASLS5Q96KN8 279 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 TOX2Q96NM4 488 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 BHLHE41Q9C0J9 482 aaPredicted RBP1.34□□□□□ -2.19
SNORD28-201ENST00000384706 NRSN2Q9GZP1 204 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 CLEC4MQ9H2X3 399 aaPredicted RBP1.34□□□□□ -2.19
SNORD28-201ENST00000384706 PIDD1Q9HB75 910 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 ZFYVE1Q9HBF4 777 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 ZFYVE28Q9HCC9 887 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 SSU72Q9NP77 194 aaKnown RBP1.34□□□□□ -2.19
SNORD28-201ENST00000384706 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP1.34□□□□□ -2.19
SNORD28-201ENST00000384706 VAV3Q9UKW4 847 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 PPP1R9AQ9ULJ8 1098 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 POLIQ9UNA4 740 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 AMOTL2Q9Y2J4 779 aa1.34□□□□□ -2.19
SNORD28-201ENST00000384706 A0A1W2PP55 124 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 ZNF503-AS2A6NEH8 195 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 LEFTY1O75610 366 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 ATG7O95352 703 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 SLFN14P0C7P3 912 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 ZSCAN22P10073 491 aaPredicted RBP1.33□□□□□ -2.2
SNORD28-201ENST00000384706 SRPK2P78362 688 aaKnown RBP1.33□□□□□ -2.2
SNORD28-201ENST00000384706 ZP2Q05996 745 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 EHHADHQ08426 723 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 TTLL4Q14679 1199 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 KCNMB1Q16558 191 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 IFI16Q16666 785 aaKnown RBP1.33□□□□□ -2.2
SNORD28-201ENST00000384706 ANGEL2Q5VTE6 544 aaKnown RBP1.33□□□□□ -2.2
SNORD28-201ENST00000384706 ALKBH2Q6NS38 261 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 SLC23A3Q6PIS1 610 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 MPZL3Q6UWV2 235 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 LCNL1Q6ZST4 164 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 SYDE1Q6ZW31 735 aaPredicted RBP1.33□□□□□ -2.2
SNORD28-201ENST00000384706 ZSWIM9Q86XI8 627 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 CCNJLQ8IV13 435 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 LRRC56Q8IYG6 542 aaPredicted RBP1.33□□□□□ -2.2
SNORD28-201ENST00000384706 SMYD4Q8IYR2 804 aaPredicted RBP1.33□□□□□ -2.2
SNORD28-201ENST00000384706 SNX29Q8TEQ0 813 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 WDR89Q96FK6 387 aaPredicted RBP1.33□□□□□ -2.2
SNORD28-201ENST00000384706 FANCD2OSQ96PS1 177 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 TRIM56Q9BRZ2 755 aaKnown RBP1.33□□□□□ -2.2
SNORD28-201ENST00000384706 WDR18Q9BV38 432 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 GSX1Q9H4S2 264 aaPredicted RBP1.33□□□□□ -2.2
SNORD28-201ENST00000384706 LIN7BQ9HAP6 207 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 CCDC87Q9NVE4 849 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 FAM53CQ9NYF3 392 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 CRIM1Q9NZV1 1036 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 SLAIN2Q9P270 581 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 U3KQE9 123 aa1.33□□□□□ -2.2
SNORD28-201ENST00000384706 TMEM265A0A087WTH1 108 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 NFIBO00712 420 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 TMPRSS2O15393 492 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 ZNF862O60290 1169 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 FAM13AO94988 1023 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 B3GALT4O96024 378 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 CEACAM5P06731 702 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 C1QTNF9P0C862 333 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 HCLS1P14317 486 aaPredicted RBP1.32□□□□□ -2.2
SNORD28-201ENST00000384706 AFMP43652 599 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 USP5P45974 858 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 OXCT1P55809 520 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 ID3Q02535 119 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 IKZF1Q13422 519 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 TMEM67Q5HYA8 995 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 FYB2Q5VWT5 728 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 USPL1Q5W0Q7 1092 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 PRR23BQ6ZRT6 265 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 SIAH1Q8IUQ4 282 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 PHF6Q8IWS0 365 aaKnown RBP eCLIP1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms