RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 DBN1Q16643 649 aa13.88□□□□□ -0.19
SRGAP3-202ENST00000383836 VWA3BQ502W6 1294 aa13.88□□□□□ -0.19
SRGAP3-202ENST00000383836 ARHGEF12Q9NZN5 1544 aa13.88□□□□□ -0.19
SRGAP3-202ENST00000383836 PRXQ9BXM0 1461 aa13.88□□□□□ -0.19
SRGAP3-202ENST00000383836 HGSO14964 777 aaPredicted RBP13.88□□□□□ -0.19
SRGAP3-202ENST00000383836 FAN1Q9Y2M0 1017 aa13.88□□□□□ -0.19
SRGAP3-202ENST00000383836 MAP3K21Q5TCX8 1036 aa13.88□□□□□ -0.19
SRGAP3-202ENST00000383836 Q9H521 79 aa13.88□□□□□ -0.19
SRGAP3-202ENST00000383836 BCAP29Q9UHQ4 241 aa13.88□□□□□ -0.19
SRGAP3-202ENST00000383836 PRR16Q569H4 304 aa13.88□□□□□ -0.19
SRGAP3-202ENST00000383836 ANKRD44Q8N8A2 993 aa13.88□□□□□ -0.19
SRGAP3-202ENST00000383836 VCX3AQ9NNX9 186 aa13.88□□□□□ -0.19
SRGAP3-202ENST00000383836 MAP3K2Q9Y2U5 619 aa13.88□□□□□ -0.19
SRGAP3-202ENST00000383836 NUP58Q9BVL2 599 aa13.88□□□□□ -0.19
SRGAP3-202ENST00000383836 ANKRD12Q6UB98 2062 aa13.88□□□□□ -0.19
SRGAP3-202ENST00000383836 BCAS4Q8TDM0 211 aa13.88□□□□□ -0.19
SRGAP3-202ENST00000383836 DIXDC1Q155Q3 683 aa13.87□□□□□ -0.19
SRGAP3-202ENST00000383836 CERS3Q8IU89 383 aa13.87□□□□□ -0.19
SRGAP3-202ENST00000383836 IQUBQ8NA54 791 aa13.87□□□□□ -0.19
SRGAP3-202ENST00000383836 MBIPQ9NS73 344 aa13.87□□□□□ -0.19
SRGAP3-202ENST00000383836 PPFIA2O75334 1257 aa13.87□□□□□ -0.19
SRGAP3-202ENST00000383836 ZMAT2Q96NC0 199 aaKnown RBP13.87□□□□□ -0.19
SRGAP3-202ENST00000383836 TXNDC2Q86VQ3 553 aa13.87□□□□□ -0.19
SRGAP3-202ENST00000383836 PPP1R2P41236 205 aa13.87□□□□□ -0.19
SRGAP3-202ENST00000383836 TSC1Q92574 1164 aa13.87□□□□□ -0.19
SRGAP3-202ENST00000383836 THEGQ9P2T0 379 aa13.87□□□□□ -0.19
SRGAP3-202ENST00000383836 SAMM50Q9Y512 469 aa13.87□□□□□ -0.19
SRGAP3-202ENST00000383836 SLF2Q8IX21 1173 aa13.87□□□□□ -0.19
SRGAP3-202ENST00000383836 RNF40O75150 1001 aa13.87□□□□□ -0.19
SRGAP3-202ENST00000383836 SND1Q7KZF4 910 aaKnown RBP eCLIP13.87□□□□□ -0.19
SRGAP3-202ENST00000383836 TTC41PQ6P2S7 1318 aa13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 CLTAP09496 248 aa13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 MRPS9P82933 396 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 CREB3L3Q68CJ9 461 aa13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 FAF1Q9UNN5 650 aaPredicted RBP13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 FAM169AQ9Y6X4 670 aa13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 GRIN2BQ13224 1484 aa13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 PTPDC1A2A3K4 754 aa13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 HHATQ5VTY9 493 aa13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 LMBRD1Q9NUN5 540 aa13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 KLHL14Q9P2G3 628 aa13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 RPRD2Q5VT52 1461 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 CALML3P27482 149 aa13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 WHAMMQ8TF30 809 aa13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 ZMYM3Q14202 1370 aa13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 ERCC5P28715 1186 aaPredicted RBP13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 RASIP1Q5U651 963 aa13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 NOC4LQ9BVI4 516 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 JRKLQ9Y4A0 524 aa13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 MCM7P33993 719 aa13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 MAK16Q9BXY0 300 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 DDX41Q9UJV9 622 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-202ENST00000383836 KRT71Q3SY84 523 aa13.85□□□□□ -0.19
SRGAP3-202ENST00000383836 LRRC23Q53EV4 343 aaPredicted RBP13.85□□□□□ -0.19
SRGAP3-202ENST00000383836 VAT1LQ9HCJ6 419 aa13.85□□□□□ -0.19
SRGAP3-202ENST00000383836 ESR2Q92731 530 aa13.85□□□□□ -0.19
SRGAP3-202ENST00000383836 SAR1BQ9Y6B6 198 aa13.85□□□□□ -0.19
SRGAP3-202ENST00000383836 ANKRD20A3Q5VUR7 823 aa13.85□□□□□ -0.19
SRGAP3-202ENST00000383836 RNASE9P60153 205 aaKnown RBP13.85□□□□□ -0.19
SRGAP3-202ENST00000383836 HSP90AA5PQ58FG0 334 aa13.85□□□□□ -0.19
SRGAP3-202ENST00000383836 ZNF652Q9Y2D9 606 aa13.85□□□□□ -0.19
SRGAP3-202ENST00000383836 TMOD2Q9NZR1 351 aa13.85□□□□□ -0.19
SRGAP3-202ENST00000383836 RAB17Q9H0T7 212 aa13.85□□□□□ -0.19
SRGAP3-202ENST00000383836 TACC3Q9Y6A5 838 aa13.85□□□□□ -0.19
SRGAP3-202ENST00000383836 RTL9Q8NET4 1388 aa13.84□□□□□ -0.19
SRGAP3-202ENST00000383836 SNX16P57768 344 aa13.84□□□□□ -0.19
SRGAP3-202ENST00000383836 NLRP12P59046 1061 aa13.84□□□□□ -0.19
SRGAP3-202ENST00000383836 AFAP1L2Q8N4X5 818 aa13.84□□□□□ -0.19
SRGAP3-202ENST00000383836 N4BP2L2Q92802 583 aaPredicted RBP13.84□□□□□ -0.19
SRGAP3-202ENST00000383836 PARP2Q9UGN5 583 aa13.84□□□□□ -0.19
SRGAP3-202ENST00000383836 TOM1L2Q6ZVM7 507 aa13.84□□□□□ -0.19
SRGAP3-202ENST00000383836 IMPG2Q9BZV3 1241 aa13.84□□□□□ -0.19
SRGAP3-202ENST00000383836 AMOTQ4VCS5 1084 aa13.84□□□□□ -0.19
SRGAP3-202ENST00000383836 TMCO4Q5TGY1 634 aa13.84□□□□□ -0.19
SRGAP3-202ENST00000383836 ZNF215Q9UL58 517 aaPredicted RBP13.84□□□□□ -0.19
SRGAP3-202ENST00000383836 RGS16O15492 202 aaPredicted RBP13.84□□□□□ -0.19
SRGAP3-202ENST00000383836 CTNNA1P35221 906 aaKnown RBP13.84□□□□□ -0.19
SRGAP3-202ENST00000383836 TBC1D8BQ0IIM8 1120 aa13.84□□□□□ -0.19
SRGAP3-202ENST00000383836 HEATR3Q7Z4Q2 680 aa13.84□□□□□ -0.19
SRGAP3-202ENST00000383836 PLEKHM2Q8IWE5 1019 aa13.84□□□□□ -0.19
SRGAP3-202ENST00000383836 ATP8B1O43520 1251 aa13.84□□□□□ -0.19
SRGAP3-202ENST00000383836 RPSAP08865 295 aaKnown RBP13.84□□□□□ -0.19
SRGAP3-202ENST00000383836 PSMD6Q15008 389 aa13.84□□□□□ -0.19
SRGAP3-202ENST00000383836 DTHD1Q6ZMT9 781 aa13.84□□□□□ -0.19
SRGAP3-202ENST00000383836 SYCE1Q8N0S2 351 aa13.83□□□□□ -0.19
SRGAP3-202ENST00000383836 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.83□□□□□ -0.19
SRGAP3-202ENST00000383836 RAD54L2Q9Y4B4 1467 aa13.83□□□□□ -0.19
SRGAP3-202ENST00000383836 PPP2R5AQ15172 486 aa13.83□□□□□ -0.19
SRGAP3-202ENST00000383836 LEO1Q8WVC0 666 aaPredicted RBP13.83□□□□□ -0.19
SRGAP3-202ENST00000383836 PDE11AQ9HCR9 933 aa13.83□□□□□ -0.19
SRGAP3-202ENST00000383836 ANKIB1Q9P2G1 1089 aa13.83□□□□□ -0.19
SRGAP3-202ENST00000383836 SESN3P58005 492 aa13.83□□□□□ -0.2
SRGAP3-202ENST00000383836 ZKSCAN8Q15776 578 aaPredicted RBP13.83□□□□□ -0.2
SRGAP3-202ENST00000383836 VPS16Q9H269 839 aa13.83□□□□□ -0.2
SRGAP3-202ENST00000383836 PPP1R9AQ9ULJ8 1098 aa13.83□□□□□ -0.2
SRGAP3-202ENST00000383836 MGEA5O60502 916 aa13.83□□□□□ -0.2
SRGAP3-202ENST00000383836 CCT5P48643 541 aa13.83□□□□□ -0.2
SRGAP3-202ENST00000383836 NMIQ13287 307 aaPredicted RBP13.83□□□□□ -0.2
SRGAP3-202ENST00000383836 RAPGEF1Q13905 1077 aa13.83□□□□□ -0.2
SRGAP3-202ENST00000383836 MSANTD4Q8NCY6 345 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms