RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 USP40Q9NVE5 1235 aa21.38■■□□□ 1.01
CD9-202ENST00000382515 NDUFB9Q9Y6M9 179 aa21.38■■□□□ 1.01
CD9-202ENST00000382515 CYP7A1P22680 504 aa21.37■■□□□ 1.01
CD9-202ENST00000382515 TSHZ3Q63HK5 1081 aa21.37■■□□□ 1.01
CD9-202ENST00000382515 FAM83AQ86UY5 434 aa21.37■■□□□ 1.01
CD9-202ENST00000382515 MAGEB6Q8N7X4 407 aa21.37■■□□□ 1.01
CD9-202ENST00000382515 ZNF384Q8TF68 577 aa21.37■■□□□ 1.01
CD9-202ENST00000382515 BTDP43251 543 aa21.36■■□□□ 1.01
CD9-202ENST00000382515 CDC42EP5Q6NZY7 148 aa21.36■■□□□ 1.01
CD9-202ENST00000382515 IDI2Q9BXS1 227 aa21.36■■□□□ 1.01
CD9-202ENST00000382515 PDE6AP16499 860 aa21.35■■□□□ 1.01
CD9-202ENST00000382515 ADD2P35612 726 aa21.35■■□□□ 1.01
CD9-202ENST00000382515 USP48Q86UV5 1035 aa21.35■■□□□ 1.01
CD9-202ENST00000382515 EDC3Q96F86 508 aaKnown RBP21.35■■□□□ 1.01
CD9-202ENST00000382515 DEFB129Q9H1M3 183 aa21.35■■□□□ 1.01
CD9-202ENST00000382515 PDE4AP27815 886 aa21.34■■□□□ 1.01
CD9-202ENST00000382515 C1QTNF8P60827 252 aa21.34■■□□□ 1.01
CD9-202ENST00000382515 HOOK2Q96ED9 719 aa21.34■■□□□ 1.01
CD9-202ENST00000382515 VEZTQ9HBM0 779 aa21.34■■□□□ 1.01
CD9-202ENST00000382515 PCDHAC2Q9Y5I4 1007 aa21.34■■□□□ 1.01
CD9-202ENST00000382515 CLRN2A0PK11 232 aa21.33■■□□□ 1.01
CD9-202ENST00000382515 RNF113AO15541 343 aaKnown RBP21.33■■□□□ 1.01
CD9-202ENST00000382515 ENTPD3O75355 529 aa21.33■■□□□ 1.01
CD9-202ENST00000382515 SUPT20HL1Q3ZLR7 823 aa21.33■■□□□ 1.01
CD9-202ENST00000382515 AKAP11Q9UKA4 1901 aa21.33■■□□□ 1
CD9-202ENST00000382515 ASTN2O75129 1339 aaPredicted RBP21.32■■□□□ 1
CD9-202ENST00000382515 PASKQ96RG2 1323 aa21.32■■□□□ 1
CD9-202ENST00000382515 ZNF532Q9HCE3 1301 aa21.32■■□□□ 1
CD9-202ENST00000382515 ZNF646O15015 1829 aaPredicted RBP21.32■■□□□ 1
CD9-202ENST00000382515 TCRBV5S4A2TA0A5A2 114 aa21.32■■□□□ 1
CD9-202ENST00000382515 TRIM6-TRIM34B2RNG4 842 aa21.32■■□□□ 1
CD9-202ENST00000382515 RHBDL3P58872 404 aa21.32■■□□□ 1
CD9-202ENST00000382515 RASA3Q14644 834 aa21.32■■□□□ 1
CD9-202ENST00000382515 FAM151AQ8WW52 585 aa21.32■■□□□ 1
CD9-202ENST00000382515 FSD1Q9BTV5 496 aa21.32■■□□□ 1
CD9-202ENST00000382515 GLIS2Q9BZE0 524 aaPredicted RBP21.32■■□□□ 1
CD9-202ENST00000382515 MAGEB6P1A0A0J9YX57 407 aa21.31■■□□□ 1
CD9-202ENST00000382515 HIP1O00291 1037 aa21.31■■□□□ 1
CD9-202ENST00000382515 NF2P35240 595 aa21.31■■□□□ 1
CD9-202ENST00000382515 AATFQ9NY61 560 aaKnown RBP eCLIP21.31■■□□□ 1
CD9-202ENST00000382515 FKBP1BP68106 108 aa21.3■■□□□ 1
CD9-202ENST00000382515 TTC22Q5TAA0 569 aa21.3■■□□□ 1
CD9-202ENST00000382515 APPBP2Q92624 585 aa21.3■■□□□ 1
CD9-202ENST00000382515 ADAMTSL1Q8N6G6 1762 aa21.29■■□□□ 1
CD9-202ENST00000382515 TCP10L2B9ZVM9 353 aa21.29■■□□□ 1
CD9-202ENST00000382515 WDHD1O75717 1129 aaPredicted RBP21.29■■□□□ 1
CD9-202ENST00000382515 ADGRA1Q86SQ6 560 aa21.29■■□□□ 1
CD9-202ENST00000382515 TEX11Q8IYF3 940 aa21.29■■□□□ 1
CD9-202ENST00000382515 RILPL2Q969X0 211 aa21.29■■□□□ 1
CD9-202ENST00000382515 RFX7Q2KHR2 1363 aa21.28■■□□□ 1
CD9-202ENST00000382515 APLP1P51693 650 aa21.28■■□□□ 1
CD9-202ENST00000382515 RIOK1Q9BRS2 568 aaKnown RBP21.28■■□□□ 1
CD9-202ENST00000382515 CRNKL1Q9BZJ0 848 aaKnown RBP21.28■■□□□ 1
CD9-202ENST00000382515 DHX36Q9H2U1 1008 aaKnown RBP21.28■■□□□ 1
CD9-202ENST00000382515 MYH13Q9UKX3 1938 aa21.27■■□□□ 1
CD9-202ENST00000382515 UNCXA6NJT0 531 aa21.27■■□□□ 1
CD9-202ENST00000382515 ADM5C9JUS6 153 aa21.27■■□□□ 1
CD9-202ENST00000382515 GNAT2P19087 354 aa21.27■■□□□ 1
CD9-202ENST00000382515 MIGA1Q8NAN2 632 aa21.27■■□□□ 1
CD9-202ENST00000382515 SH3RF3Q8TEJ3 882 aaPredicted RBP21.27■■□□□ 1
CD9-202ENST00000382515 AIDAQ96BJ3 306 aa21.27■■□□□ 1
CD9-202ENST00000382515 CDCA5Q96FF9 252 aa21.27■■□□□ 1
CD9-202ENST00000382515 FAM198AQ9UFP1 575 aa21.27■■□□□ 1
CD9-202ENST00000382515 TMEM88BA6NKF7 163 aa21.26■□□□□ 0.99
CD9-202ENST00000382515 PPP1R12BO60237 982 aaPredicted RBP21.26■□□□□ 0.99
CD9-202ENST00000382515 RGS3P49796 1198 aa21.26■□□□□ 0.99
CD9-202ENST00000382515 C2orf69Q8N8R5 385 aa21.26■□□□□ 0.99
CD9-202ENST00000382515 HELLSQ9NRZ9 838 aa21.26■□□□□ 0.99
CD9-202ENST00000382515 TRAF5O00463 557 aa21.25■□□□□ 0.99
CD9-202ENST00000382515 CELF2O95319 508 aaKnown RBP21.25■□□□□ 0.99
CD9-202ENST00000382515 CACNB3P54284 484 aa21.25■□□□□ 0.99
CD9-202ENST00000382515 NFIAQ12857 509 aa21.25■□□□□ 0.99
CD9-202ENST00000382515 ZMYM1Q5SVZ6 1142 aa21.25■□□□□ 0.99
CD9-202ENST00000382515 ATP8A2Q9NTI2 1148 aa21.25■□□□□ 0.99
CD9-202ENST00000382515 TAOK2Q9UL54 1235 aa21.25■□□□□ 0.99
CD9-202ENST00000382515 RPAP1Q9BWH6 1393 aaPredicted RBP21.24■□□□□ 0.99
CD9-202ENST00000382515 SDSP20132 328 aa21.24■□□□□ 0.99
CD9-202ENST00000382515 USP5P45974 858 aa21.24■□□□□ 0.99
CD9-202ENST00000382515 DYNLL1P63167 89 aaKnown RBP21.24■□□□□ 0.99
CD9-202ENST00000382515 CST9Q5W186 159 aa21.24■□□□□ 0.99
CD9-202ENST00000382515 GIMAP6Q6P9H5 292 aa21.24■□□□□ 0.99
CD9-202ENST00000382515 TGFBRAP1Q8WUH2 860 aa21.24■□□□□ 0.99
CD9-202ENST00000382515 OSBP2Q969R2 916 aa21.24■□□□□ 0.99
CD9-202ENST00000382515 DDRGK1Q96HY6 314 aa21.24■□□□□ 0.99
CD9-202ENST00000382515 TEPSINQ96N21 525 aa21.24■□□□□ 0.99
CD9-202ENST00000382515 TMEM39BQ9GZU3 492 aa21.24■□□□□ 0.99
CD9-202ENST00000382515 PUS7LQ9H0K6 701 aaKnown RBP21.24■□□□□ 0.99
CD9-202ENST00000382515 CREBZFQ9NS37 354 aa21.24■□□□□ 0.99
CD9-202ENST00000382515 CNTNAP1P78357 1384 aa21.23■□□□□ 0.99
CD9-202ENST00000382515 HSPA6P17066 643 aa21.23■□□□□ 0.99
CD9-202ENST00000382515 MFAP1P55081 439 aaKnown RBP21.23■□□□□ 0.99
CD9-202ENST00000382515 TCP10Q12799 353 aa21.23■□□□□ 0.99
CD9-202ENST00000382515 BMP2KLQ5H9B9 411 aa21.23■□□□□ 0.99
CD9-202ENST00000382515 DCAF15Q66K64 600 aa21.23■□□□□ 0.99
CD9-202ENST00000382515 HHIPL1Q96JK4 782 aa21.23■□□□□ 0.99
CD9-202ENST00000382515 STRBPQ96SI9 672 aaKnown RBP21.23■□□□□ 0.99
CD9-202ENST00000382515 OSBPL5Q9H0X9 879 aaPredicted RBP21.23■□□□□ 0.99
CD9-202ENST00000382515 MBD4O95243 580 aa21.22■□□□□ 0.99
CD9-202ENST00000382515 GSPT1P15170 499 aaKnown RBP21.22■□□□□ 0.99
CD9-202ENST00000382515 MAP3K10Q02779 954 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms