RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 CCDC148Q8NFR7 591 aa17.09■□□□□ 0.33
VLDLR-202ENST00000382099 MRPS27Q92552 414 aaKnown RBP17.09■□□□□ 0.33
VLDLR-202ENST00000382099 CCDC114Q96M63 670 aa17.09■□□□□ 0.33
VLDLR-202ENST00000382099 DDX20Q9UHI6 824 aaKnown RBP17.09■□□□□ 0.33
VLDLR-202ENST00000382099 RBM8AQ9Y5S9 174 aaKnown RBP17.09■□□□□ 0.33
VLDLR-202ENST00000382099 CCDC175P0C221 793 aa17.09■□□□□ 0.33
VLDLR-202ENST00000382099 PSMA5P28066 241 aa17.09■□□□□ 0.33
VLDLR-202ENST00000382099 STAP2Q9UGK3 403 aa17.09■□□□□ 0.33
VLDLR-202ENST00000382099 ATP2C2O75185 946 aa17.09■□□□□ 0.33
VLDLR-202ENST00000382099 PRPF6O94906 941 aaKnown RBP17.09■□□□□ 0.33
VLDLR-202ENST00000382099 SNCBQ16143 134 aa17.09■□□□□ 0.33
VLDLR-202ENST00000382099 CCDC26Q8TAB7 109 aa17.09■□□□□ 0.33
VLDLR-202ENST00000382099 EPB41L2O43491 1005 aaKnown RBP17.08■□□□□ 0.33
VLDLR-202ENST00000382099 PPFIA1Q13136 1202 aa17.08■□□□□ 0.33
VLDLR-202ENST00000382099 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.08■□□□□ 0.33
VLDLR-202ENST00000382099 NBPF3Q9H094 633 aa17.08■□□□□ 0.33
VLDLR-202ENST00000382099 A0A0U1RQJ8 604 aa17.08■□□□□ 0.32
VLDLR-202ENST00000382099 MEFVO15553 781 aaPredicted RBP17.08■□□□□ 0.32
VLDLR-202ENST00000382099 CREB3L3Q68CJ9 461 aa17.08■□□□□ 0.32
VLDLR-202ENST00000382099 G2E3Q7L622 706 aa17.08■□□□□ 0.32
VLDLR-202ENST00000382099 ATRIPQ8WXE1 791 aa17.08■□□□□ 0.32
VLDLR-202ENST00000382099 DLG5Q8TDM6 1919 aa17.08■□□□□ 0.32
VLDLR-202ENST00000382099 ADCY9O60503 1353 aa17.08■□□□□ 0.32
VLDLR-202ENST00000382099 TTC36A6NLP5 189 aa17.08■□□□□ 0.32
VLDLR-202ENST00000382099 EIF3HO15372 352 aaKnown RBP eCLIP17.08■□□□□ 0.32
VLDLR-202ENST00000382099 EIF2S2P20042 333 aaKnown RBP17.08■□□□□ 0.32
VLDLR-202ENST00000382099 ARHGAP25P42331 645 aa17.08■□□□□ 0.32
VLDLR-202ENST00000382099 NDUFA8P51970 172 aa17.08■□□□□ 0.32
VLDLR-202ENST00000382099 RWDD2BP57060 319 aa17.08■□□□□ 0.32
VLDLR-202ENST00000382099 PDCLQ13371 301 aa17.08■□□□□ 0.32
VLDLR-202ENST00000382099 PAIP2Q9BPZ3 127 aaKnown RBP17.08■□□□□ 0.32
VLDLR-202ENST00000382099 HPCAL4Q9UM19 191 aa17.08■□□□□ 0.32
VLDLR-202ENST00000382099 SOS1Q07889 1333 aaPredicted RBP17.07■□□□□ 0.32
VLDLR-202ENST00000382099 ALKQ9UM73 1620 aa17.07■□□□□ 0.32
VLDLR-202ENST00000382099 TMCO5BA8MYB1 307 aa17.07■□□□□ 0.32
VLDLR-202ENST00000382099 ATP1A2P50993 1020 aa17.07■□□□□ 0.32
VLDLR-202ENST00000382099 NCAPH2Q6IBW4 605 aa17.07■□□□□ 0.32
VLDLR-202ENST00000382099 VSTM4Q8IW00 320 aa17.07■□□□□ 0.32
VLDLR-202ENST00000382099 MICAL1Q8TDZ2 1067 aa17.07■□□□□ 0.32
VLDLR-202ENST00000382099 IL13P35225 146 aa17.07■□□□□ 0.32
VLDLR-202ENST00000382099 FNTAP49354 379 aa17.07■□□□□ 0.32
VLDLR-202ENST00000382099 ZC3H12AQ5D1E8 599 aaKnown RBP17.07■□□□□ 0.32
VLDLR-202ENST00000382099 AMOTL1Q8IY63 956 aa17.07■□□□□ 0.32
VLDLR-202ENST00000382099 PREX1Q8TCU6 1659 aa17.07■□□□□ 0.32
VLDLR-202ENST00000382099 GOLGA6BA6NDN3 693 aa17.06■□□□□ 0.32
VLDLR-202ENST00000382099 SF3B2Q13435 895 aaKnown RBP17.06■□□□□ 0.32
VLDLR-202ENST00000382099 ANKRD1Q15327 319 aa17.06■□□□□ 0.32
VLDLR-202ENST00000382099 CCDC181Q5TID7 509 aa17.06■□□□□ 0.32
VLDLR-202ENST00000382099 SLC35F6Q8N357 371 aa17.06■□□□□ 0.32
VLDLR-202ENST00000382099 TBC1D31Q96DN5 1066 aa17.06■□□□□ 0.32
VLDLR-202ENST00000382099 RSRC1Q96IZ7 334 aaKnown RBP17.06■□□□□ 0.32
VLDLR-202ENST00000382099 ZNF396Q96N95 335 aaPredicted RBP17.06■□□□□ 0.32
VLDLR-202ENST00000382099 SOWAHDA6NJG2 315 aa17.06■□□□□ 0.32
VLDLR-202ENST00000382099 GRIK3Q13003 919 aa17.06■□□□□ 0.32
VLDLR-202ENST00000382099 STK38Q15208 465 aa17.06■□□□□ 0.32
VLDLR-202ENST00000382099 MICALCLQ6ZW33 695 aa17.06■□□□□ 0.32
VLDLR-202ENST00000382099 TATDN2Q93075 761 aa17.06■□□□□ 0.32
VLDLR-202ENST00000382099 SAAL1Q96ER3 474 aa17.06■□□□□ 0.32
VLDLR-202ENST00000382099 G3BP2Q9UN86 482 aaKnown RBP17.06■□□□□ 0.32
VLDLR-202ENST00000382099 CEBPAP49715 358 aaPredicted RBP17.06■□□□□ 0.32
VLDLR-202ENST00000382099 MRPL12P52815 198 aaKnown RBP17.06■□□□□ 0.32
VLDLR-202ENST00000382099 NLRP12P59046 1061 aa17.06■□□□□ 0.32
VLDLR-202ENST00000382099 IFT88Q13099 833 aa17.06■□□□□ 0.32
VLDLR-202ENST00000382099 NCAPHQ15003 741 aa17.06■□□□□ 0.32
VLDLR-202ENST00000382099 MSL3Q8N5Y2 521 aaKnown RBP17.06■□□□□ 0.32
VLDLR-202ENST00000382099 SPDYE1Q8NFV5 336 aaPredicted RBP17.06■□□□□ 0.32
VLDLR-202ENST00000382099 CDC5LQ99459 802 aaKnown RBP17.06■□□□□ 0.32
VLDLR-202ENST00000382099 RCOR1Q9UKL0 485 aa17.06■□□□□ 0.32
VLDLR-202ENST00000382099 CCT4P50991 539 aaKnown RBP17.05■□□□□ 0.32
VLDLR-202ENST00000382099 PIP4K2BP78356 416 aa17.05■□□□□ 0.32
VLDLR-202ENST00000382099 KCNB1Q14721 858 aa17.05■□□□□ 0.32
VLDLR-202ENST00000382099 FKBP15Q5T1M5 1219 aa17.05■□□□□ 0.32
VLDLR-202ENST00000382099 ENGASEQ8NFI3 743 aa17.05■□□□□ 0.32
VLDLR-202ENST00000382099 TM6SF1Q9BZW5 370 aa17.05■□□□□ 0.32
VLDLR-202ENST00000382099 SLC40A1Q9NP59 571 aa17.05■□□□□ 0.32
VLDLR-202ENST00000382099 BSDC1Q9NW68 430 aaPredicted RBP17.05■□□□□ 0.32
VLDLR-202ENST00000382099 STX10O60499 249 aa17.05■□□□□ 0.32
VLDLR-202ENST00000382099 SNUPNO95149 360 aaKnown RBP17.05■□□□□ 0.32
VLDLR-202ENST00000382099 LTV1Q96GA3 475 aaPredicted RBP17.05■□□□□ 0.32
VLDLR-202ENST00000382099 RUFY1Q96T51 708 aa17.05■□□□□ 0.32
VLDLR-202ENST00000382099 LRRC2Q9BYS8 371 aa17.05■□□□□ 0.32
VLDLR-202ENST00000382099 MYO6Q9UM54 1294 aa17.05■□□□□ 0.32
VLDLR-202ENST00000382099 KIAA0232Q92628 1395 aa17.05■□□□□ 0.32
VLDLR-202ENST00000382099 FSBPO95073 299 aa17.04■□□□□ 0.32
VLDLR-202ENST00000382099 MCM10Q7L590 875 aa17.04■□□□□ 0.32
VLDLR-202ENST00000382099 KIAA1328Q86T90 577 aa17.04■□□□□ 0.32
VLDLR-202ENST00000382099 KIF4AO95239 1232 aa17.04■□□□□ 0.32
VLDLR-202ENST00000382099 ATP8B2P98198 1209 aa17.04■□□□□ 0.32
VLDLR-202ENST00000382099 STK31Q9BXU1 1019 aa17.04■□□□□ 0.32
VLDLR-202ENST00000382099 PCDHA7Q9UN72 937 aa17.04■□□□□ 0.32
VLDLR-202ENST00000382099 RTN2O75298 545 aa17.04■□□□□ 0.32
VLDLR-202ENST00000382099 MYL5Q02045 173 aa17.04■□□□□ 0.32
VLDLR-202ENST00000382099 TMEM139Q8IV31 216 aa17.04■□□□□ 0.32
VLDLR-202ENST00000382099 YIPF3Q9GZM5 350 aa17.04■□□□□ 0.32
VLDLR-202ENST00000382099 CDC25CP30307 473 aa17.03■□□□□ 0.32
VLDLR-202ENST00000382099 CCDC13Q8IYE1 715 aa17.03■□□□□ 0.32
VLDLR-202ENST00000382099 A1BGP04217 495 aa17.03■□□□□ 0.32
VLDLR-202ENST00000382099 OLFM4Q6UX06 510 aa17.03■□□□□ 0.32
VLDLR-202ENST00000382099 PARP9Q8IXQ6 854 aa17.03■□□□□ 0.32
VLDLR-202ENST00000382099 COG1Q8WTW3 980 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms