RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 NFIAQ12857 509 aa17.58■□□□□ 0.4
SHOX-202ENST00000381575 CCDC102BQ68D86 513 aa17.58■□□□□ 0.4
SHOX-202ENST00000381575 CDC42EP5Q6NZY7 148 aa17.58■□□□□ 0.4
SHOX-202ENST00000381575 FAM83AQ86UY5 434 aa17.58■□□□□ 0.4
SHOX-202ENST00000381575 MIER1Q8N108 512 aa17.58■□□□□ 0.4
SHOX-202ENST00000381575 MRIQ9BWK5 157 aa17.58■□□□□ 0.4
SHOX-202ENST00000381575 SNCAIPQ9Y6H5 919 aa17.58■□□□□ 0.4
SHOX-202ENST00000381575 MKI67P46013 3256 aaKnown RBP17.57■□□□□ 0.4
SHOX-202ENST00000381575 CCL15-CCL14A0A0B4J2E2 113 aa17.57■□□□□ 0.4
SHOX-202ENST00000381575 CAP1Q01518 475 aa17.57■□□□□ 0.4
SHOX-202ENST00000381575 PKN2Q16513 984 aaKnown RBP17.57■□□□□ 0.4
SHOX-202ENST00000381575 CCL15Q16663 113 aa17.57■□□□□ 0.4
SHOX-202ENST00000381575 FBXO46Q6PJ61 603 aaPredicted RBP17.57■□□□□ 0.4
SHOX-202ENST00000381575 ATF7IPQ6VMQ6 1270 aa17.57■□□□□ 0.4
SHOX-202ENST00000381575 CD99L2Q8TCZ2 262 aa17.57■□□□□ 0.4
SHOX-202ENST00000381575 HDAC5Q9UQL6 1122 aa17.57■□□□□ 0.4
SHOX-202ENST00000381575 TRIM17Q9Y577 477 aa17.57■□□□□ 0.4
SHOX-202ENST00000381575 BRCA2P51587 3418 aa17.57■□□□□ 0.4
SHOX-202ENST00000381575 A0A1B0GUL7 405 aa17.56■□□□□ 0.4
SHOX-202ENST00000381575 TESPA1A2RU30 521 aaPredicted RBP17.56■□□□□ 0.4
SHOX-202ENST00000381575 HNRNPUQ00839 825 aaKnown RBP eCLIP17.56■□□□□ 0.4
SHOX-202ENST00000381575 RASGRF1Q13972 1273 aa17.56■□□□□ 0.4
SHOX-202ENST00000381575 FKBP1CQ5VVH2 108 aa17.56■□□□□ 0.4
SHOX-202ENST00000381575 OTUD7BQ6GQQ9 843 aa17.56■□□□□ 0.4
SHOX-202ENST00000381575 OTOP1Q7RTM1 612 aa17.56■□□□□ 0.4
SHOX-202ENST00000381575 DENND2AQ9ULE3 1009 aa17.56■□□□□ 0.4
SHOX-202ENST00000381575 RPAP1Q9BWH6 1393 aaPredicted RBP17.56■□□□□ 0.4
SHOX-202ENST00000381575 PNMA6EA0A0J9YXQ4 647 aa17.55■□□□□ 0.4
SHOX-202ENST00000381575 IPO8O15397 1037 aaKnown RBP17.55■□□□□ 0.4
SHOX-202ENST00000381575 INPP5BP32019 993 aa17.55■□□□□ 0.4
SHOX-202ENST00000381575 ZFPM1Q8IX07 1006 aa17.55■□□□□ 0.4
SHOX-202ENST00000381575 FAM43AQ8N2R8 423 aa17.55■□□□□ 0.4
SHOX-202ENST00000381575 XAGE2Q96GT9 111 aa17.55■□□□□ 0.4
SHOX-202ENST00000381575 USP40Q9NVE5 1235 aa17.55■□□□□ 0.4
SHOX-202ENST00000381575 FAM198AQ9UFP1 575 aa17.55■□□□□ 0.4
SHOX-202ENST00000381575 SPDYE5A6NIY4 337 aa17.54■□□□□ 0.4
SHOX-202ENST00000381575 GTF2A2P52657 109 aa17.54■□□□□ 0.4
SHOX-202ENST00000381575 MTX1Q13505 466 aa17.54■□□□□ 0.4
SHOX-202ENST00000381575 TAF1CQ15572 869 aaPredicted RBP17.54■□□□□ 0.4
SHOX-202ENST00000381575 TMEM57Q8N5G2 664 aa17.54■□□□□ 0.4
SHOX-202ENST00000381575 FAM151AQ8WW52 585 aa17.54■□□□□ 0.4
SHOX-202ENST00000381575 ABCF2Q9UG63 623 aa17.54■□□□□ 0.4
SHOX-202ENST00000381575 SALL1Q9NSC2 1324 aa17.54■□□□□ 0.4
SHOX-202ENST00000381575 MYO5AQ9Y4I1 1855 aaKnown RBP17.54■□□□□ 0.4
SHOX-202ENST00000381575 SEMA3EO15041 775 aa17.53■□□□□ 0.4
SHOX-202ENST00000381575 GNAI2P04899 355 aa17.53■□□□□ 0.4
SHOX-202ENST00000381575 DCAF15Q66K64 600 aa17.53■□□□□ 0.4
SHOX-202ENST00000381575 PI16Q6UXB8 463 aa17.53■□□□□ 0.4
SHOX-202ENST00000381575 NEUROD6Q96NK8 337 aa17.53■□□□□ 0.4
SHOX-202ENST00000381575 ZNF341Q9BYN7 854 aa17.53■□□□□ 0.4
SHOX-202ENST00000381575 IRF6O14896 467 aa17.53■□□□□ 0.4
SHOX-202ENST00000381575 ERO1BQ86YB8 467 aa17.53■□□□□ 0.4
SHOX-202ENST00000381575 DZIP1Q86YF9 867 aaKnown RBP17.53■□□□□ 0.4
SHOX-202ENST00000381575 SLURP2P0DP57 97 aa17.52■□□□□ 0.39
SHOX-202ENST00000381575 SP3Q02447 781 aa17.52■□□□□ 0.39
SHOX-202ENST00000381575 HOOK2Q96ED9 719 aa17.52■□□□□ 0.39
SHOX-202ENST00000381575 ERO1AQ96HE7 468 aa17.52■□□□□ 0.39
SHOX-202ENST00000381575 C1orf115Q9H7X2 142 aa17.52■□□□□ 0.39
SHOX-202ENST00000381575 BTBD19C9JJ37 291 aa17.51■□□□□ 0.39
SHOX-202ENST00000381575 ECM2O94769 699 aaPredicted RBP17.51■□□□□ 0.39
SHOX-202ENST00000381575 RGS3P49796 1198 aa17.51■□□□□ 0.39
SHOX-202ENST00000381575 PPIL2Q13356 520 aa17.51■□□□□ 0.39
SHOX-202ENST00000381575 MVPQ14764 893 aaKnown RBP17.51■□□□□ 0.39
SHOX-202ENST00000381575 ZKSCAN2Q63HK3 967 aa17.51■□□□□ 0.39
SHOX-202ENST00000381575 DIEXFQ68CQ4 756 aaKnown RBP17.51■□□□□ 0.39
SHOX-202ENST00000381575 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.51■□□□□ 0.39
SHOX-202ENST00000381575 AKAP2Q9Y2D5 859 aa17.51■□□□□ 0.39
SHOX-202ENST00000381575 GAKO14976 1311 aa17.51■□□□□ 0.39
SHOX-202ENST00000381575 PTPRFP10586 1907 aa17.5■□□□□ 0.39
SHOX-202ENST00000381575 CETPP11597 493 aa17.5■□□□□ 0.39
SHOX-202ENST00000381575 SNAPC2Q13487 334 aa17.5■□□□□ 0.39
SHOX-202ENST00000381575 RFX7Q2KHR2 1363 aa17.5■□□□□ 0.39
SHOX-202ENST00000381575 GORABQ5T7V8 394 aa17.5■□□□□ 0.39
SHOX-202ENST00000381575 TBC1D9Q6ZT07 1266 aa17.5■□□□□ 0.39
SHOX-202ENST00000381575 ZGPATQ8N5A5 531 aaKnown RBP17.5■□□□□ 0.39
SHOX-202ENST00000381575 ZNF384Q8TF68 577 aa17.5■□□□□ 0.39
SHOX-202ENST00000381575 EFCC1Q9HA90 598 aa17.5■□□□□ 0.39
SHOX-202ENST00000381575 ZFYVE28Q9HCC9 887 aa17.5■□□□□ 0.39
SHOX-202ENST00000381575 DOCK1Q14185 1865 aa17.49■□□□□ 0.39
SHOX-202ENST00000381575 BTDP43251 543 aa17.49■□□□□ 0.39
SHOX-202ENST00000381575 MECOMQ03112 1051 aa17.49■□□□□ 0.39
SHOX-202ENST00000381575 G3BP1Q13283 466 aaKnown RBP eCLIP17.49■□□□□ 0.39
SHOX-202ENST00000381575 PICALMQ13492 652 aa17.49■□□□□ 0.39
SHOX-202ENST00000381575 SH3BP5LQ7L8J4 393 aa17.49■□□□□ 0.39
SHOX-202ENST00000381575 DDX4Q9NQI0 724 aaKnown RBP17.49■□□□□ 0.39
SHOX-202ENST00000381575 HMG20BQ9P0W2 317 aa17.49■□□□□ 0.39
SHOX-202ENST00000381575 PTPN22Q9Y2R2 807 aa17.49■□□□□ 0.39
SHOX-202ENST00000381575 PHIPQ8WWQ0 1821 aa17.48■□□□□ 0.39
SHOX-202ENST00000381575 ATRNL1Q5VV63 1379 aa17.48■□□□□ 0.39
SHOX-202ENST00000381575 MROH7-TTC4A0A0A0MT08 1334 aa17.48■□□□□ 0.39
SHOX-202ENST00000381575 PDS5AQ29RF7 1337 aaKnown RBP17.48■□□□□ 0.39
SHOX-202ENST00000381575 RLBP1P12271 317 aa17.48■□□□□ 0.39
SHOX-202ENST00000381575 ZSCAN29Q8IWY8 852 aaPredicted RBP17.48■□□□□ 0.39
SHOX-202ENST00000381575 ARHGAP39Q9C0H5 1083 aa17.48■□□□□ 0.39
SHOX-202ENST00000381575 ZNF112Q9UJU3 913 aa17.48■□□□□ 0.39
SHOX-202ENST00000381575 CDK5RAP2Q96SN8 1893 aa17.48■□□□□ 0.39
SHOX-202ENST00000381575 ATAD5Q96QE3 1844 aa17.47■□□□□ 0.39
SHOX-202ENST00000381575 RBBP6Q7Z6E9 1792 aaKnown RBP17.47■□□□□ 0.39
SHOX-202ENST00000381575 WDHD1O75717 1129 aaPredicted RBP17.47■□□□□ 0.39
SHOX-202ENST00000381575 PPATQ06203 517 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms