RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 TDRD3Q9H7E2 651 aaKnown RBP18.7■□□□□ 0.58
PDGFB-202ENST00000381551 MYH2Q9UKX2 1941 aa18.7■□□□□ 0.58
PDGFB-202ENST00000381551 ASTN2O75129 1339 aaPredicted RBP18.7■□□□□ 0.58
PDGFB-202ENST00000381551 BTDP43251 543 aa18.69■□□□□ 0.58
PDGFB-202ENST00000381551 LRRFIP1Q32MZ4 808 aaKnown RBP18.69■□□□□ 0.58
PDGFB-202ENST00000381551 CDC42EP5Q6NZY7 148 aa18.69■□□□□ 0.58
PDGFB-202ENST00000381551 USP40Q9NVE5 1235 aa18.69■□□□□ 0.58
PDGFB-202ENST00000381551 MYO1BO43795 1136 aa18.68■□□□□ 0.58
PDGFB-202ENST00000381551 BAG3O95817 575 aa18.68■□□□□ 0.58
PDGFB-202ENST00000381551 SPDYE2Q495Y8 402 aa18.68■□□□□ 0.58
PDGFB-202ENST00000381551 BMP2KLQ5H9B9 411 aa18.68■□□□□ 0.58
PDGFB-202ENST00000381551 AATFQ9NY61 560 aaKnown RBP eCLIP18.68■□□□□ 0.58
PDGFB-202ENST00000381551 ZNF70Q9UC06 446 aaPredicted RBP18.68■□□□□ 0.58
PDGFB-202ENST00000381551 CLEC11AQ9Y240 323 aa18.68■□□□□ 0.58
PDGFB-202ENST00000381551 ADAMTSL1Q8N6G6 1762 aa18.68■□□□□ 0.58
PDGFB-202ENST00000381551 RHBDL3P58872 404 aa18.67■□□□□ 0.58
PDGFB-202ENST00000381551 ANGEL2Q5VTE6 544 aaKnown RBP18.67■□□□□ 0.58
PDGFB-202ENST00000381551 LDHDQ86WU2 507 aa18.67■□□□□ 0.58
PDGFB-202ENST00000381551 MIGA1Q8NAN2 632 aa18.67■□□□□ 0.58
PDGFB-202ENST00000381551 CLRN2A0PK11 232 aa18.66■□□□□ 0.58
PDGFB-202ENST00000381551 DYNLL1P63167 89 aaKnown RBP18.66■□□□□ 0.58
PDGFB-202ENST00000381551 ZMYM1Q5SVZ6 1142 aa18.66■□□□□ 0.58
PDGFB-202ENST00000381551 APPBP2Q92624 585 aa18.66■□□□□ 0.58
PDGFB-202ENST00000381551 RIOK1Q9BRS2 568 aaKnown RBP18.66■□□□□ 0.58
PDGFB-202ENST00000381551 NOL10Q9BSC4 688 aaKnown RBP18.66■□□□□ 0.58
PDGFB-202ENST00000381551 PUS7LQ9H0K6 701 aaKnown RBP18.66■□□□□ 0.58
PDGFB-202ENST00000381551 MAST2Q6P0Q8 1798 aa18.65■□□□□ 0.58
PDGFB-202ENST00000381551 MAGEB6P1A0A0J9YX57 407 aa18.65■□□□□ 0.58
PDGFB-202ENST00000381551 SH3RF3Q8TEJ3 882 aaPredicted RBP18.65■□□□□ 0.58
PDGFB-202ENST00000381551 OSBP2Q969R2 916 aa18.65■□□□□ 0.58
PDGFB-202ENST00000381551 DCPSQ96C86 337 aaKnown RBP18.65■□□□□ 0.58
PDGFB-202ENST00000381551 GGA3Q9NZ52 723 aa18.65■□□□□ 0.58
PDGFB-202ENST00000381551 PITPNM2Q9BZ72 1349 aa18.65■□□□□ 0.58
PDGFB-202ENST00000381551 TOMM70O94826 608 aa18.64■□□□□ 0.57
PDGFB-202ENST00000381551 PLCG2P16885 1265 aa18.64■□□□□ 0.57
PDGFB-202ENST00000381551 CACNB3P54284 484 aa18.64■□□□□ 0.57
PDGFB-202ENST00000381551 FKBP1CQ5VVH2 108 aa18.64■□□□□ 0.57
PDGFB-202ENST00000381551 MAP1SQ66K74 1059 aaPredicted RBP18.64■□□□□ 0.57
PDGFB-202ENST00000381551 CHADLQ6NUI6 762 aa18.64■□□□□ 0.57
PDGFB-202ENST00000381551 CERS3Q8IU89 383 aa18.64■□□□□ 0.57
PDGFB-202ENST00000381551 SEC62Q99442 399 aaKnown RBP18.64■□□□□ 0.57
PDGFB-202ENST00000381551 IDI2Q9BXS1 227 aa18.64■□□□□ 0.57
PDGFB-202ENST00000381551 SCAF8Q9UPN6 1271 aaKnown RBP18.64■□□□□ 0.57
PDGFB-202ENST00000381551 MYH7P12883 1935 aa18.64■□□□□ 0.57
PDGFB-202ENST00000381551 RFX7Q2KHR2 1363 aa18.64■□□□□ 0.57
PDGFB-202ENST00000381551 POLR2AP24928 1970 aaKnown RBP18.63■□□□□ 0.57
PDGFB-202ENST00000381551 HIP1O00291 1037 aa18.63■□□□□ 0.57
PDGFB-202ENST00000381551 WDHD1O75717 1129 aaPredicted RBP18.63■□□□□ 0.57
PDGFB-202ENST00000381551 NFIAQ12857 509 aa18.63■□□□□ 0.57
PDGFB-202ENST00000381551 FAM227BQ96M60 508 aa18.63■□□□□ 0.57
PDGFB-202ENST00000381551 VEZTQ9HBM0 779 aa18.63■□□□□ 0.57
PDGFB-202ENST00000381551 HELLSQ9NRZ9 838 aa18.63■□□□□ 0.57
PDGFB-202ENST00000381551 TMOD2Q9NZR1 351 aa18.63■□□□□ 0.57
PDGFB-202ENST00000381551 TCP10L2B9ZVM9 353 aa18.62■□□□□ 0.57
PDGFB-202ENST00000381551 M0R2C6 588 aa18.62■□□□□ 0.57
PDGFB-202ENST00000381551 MBD4O95243 580 aa18.62■□□□□ 0.57
PDGFB-202ENST00000381551 NMIQ13287 307 aaPredicted RBP18.62■□□□□ 0.57
PDGFB-202ENST00000381551 CDC37L1Q7L3B6 337 aa18.62■□□□□ 0.57
PDGFB-202ENST00000381551 USP48Q86UV5 1035 aa18.62■□□□□ 0.57
PDGFB-202ENST00000381551 APOBEC3FQ8IUX4 373 aaKnown RBP18.62■□□□□ 0.57
PDGFB-202ENST00000381551 TEX11Q8IYF3 940 aa18.62■□□□□ 0.57
PDGFB-202ENST00000381551 LCORLQ8N3X6 602 aa18.62■□□□□ 0.57
PDGFB-202ENST00000381551 AIDAQ96BJ3 306 aa18.62■□□□□ 0.57
PDGFB-202ENST00000381551 STRBPQ96SI9 672 aaKnown RBP18.62■□□□□ 0.57
PDGFB-202ENST00000381551 ARMT1Q9H993 441 aa18.62■□□□□ 0.57
PDGFB-202ENST00000381551 FAM198AQ9UFP1 575 aa18.62■□□□□ 0.57
PDGFB-202ENST00000381551 A0A0D9SFI3 127 aa18.61■□□□□ 0.57
PDGFB-202ENST00000381551 NPM3O75607 178 aaKnown RBP18.61■□□□□ 0.57
PDGFB-202ENST00000381551 CHMLP26374 656 aa18.61■□□□□ 0.57
PDGFB-202ENST00000381551 MCMDC2Q4G0Z9 681 aa18.61■□□□□ 0.57
PDGFB-202ENST00000381551 KRT26Q7Z3Y9 468 aa18.61■□□□□ 0.57
PDGFB-202ENST00000381551 FAM83AQ86UY5 434 aa18.61■□□□□ 0.57
PDGFB-202ENST00000381551 SULF1Q8IWU6 871 aa18.61■□□□□ 0.57
PDGFB-202ENST00000381551 RBM46Q8TBY0 533 aaKnown RBP18.61■□□□□ 0.57
PDGFB-202ENST00000381551 DEFB129Q9H1M3 183 aa18.61■□□□□ 0.57
PDGFB-202ENST00000381551 DIAPH3Q9NSV4 1193 aa18.61■□□□□ 0.57
PDGFB-202ENST00000381551 ITGBL1O95965 494 aaPredicted RBP18.6■□□□□ 0.57
PDGFB-202ENST00000381551 TNFAIP1Q13829 316 aa18.6■□□□□ 0.57
PDGFB-202ENST00000381551 RASA3Q14644 834 aa18.6■□□□□ 0.57
PDGFB-202ENST00000381551 CWC27Q6UX04 472 aaKnown RBP18.6■□□□□ 0.57
PDGFB-202ENST00000381551 DLK2Q6UY11 383 aa18.6■□□□□ 0.57
PDGFB-202ENST00000381551 ZFPM1Q8IX07 1006 aa18.6■□□□□ 0.57
PDGFB-202ENST00000381551 TGFBRAP1Q8WUH2 860 aa18.6■□□□□ 0.57
PDGFB-202ENST00000381551 GLIS2Q9BZE0 524 aaPredicted RBP18.6■□□□□ 0.57
PDGFB-202ENST00000381551 DDX4Q9NQI0 724 aaKnown RBP18.6■□□□□ 0.57
PDGFB-202ENST00000381551 AK9Q5TCS8 1911 aa18.6■□□□□ 0.57
PDGFB-202ENST00000381551 ECM29Q5VYK3 1845 aa18.6■□□□□ 0.57
PDGFB-202ENST00000381551 CNTNAP1P78357 1384 aa18.59■□□□□ 0.57
PDGFB-202ENST00000381551 ADM5C9JUS6 153 aa18.59■□□□□ 0.57
PDGFB-202ENST00000381551 GPAA1O43292 621 aa18.59■□□□□ 0.57
PDGFB-202ENST00000381551 PRKAB2O43741 272 aa18.59■□□□□ 0.57
PDGFB-202ENST00000381551 ENTPD3O75355 529 aa18.59■□□□□ 0.57
PDGFB-202ENST00000381551 TNNI2P48788 182 aa18.59■□□□□ 0.57
PDGFB-202ENST00000381551 SMC1BQ8NDV3 1235 aa18.59■□□□□ 0.57
PDGFB-202ENST00000381551 FAM151AQ8WW52 585 aa18.59■□□□□ 0.57
PDGFB-202ENST00000381551 CRNKL1Q9BZJ0 848 aaKnown RBP18.59■□□□□ 0.57
PDGFB-202ENST00000381551 TCP10Q12799 353 aa18.58■□□□□ 0.56
PDGFB-202ENST00000381551 PICALMQ13492 652 aa18.58■□□□□ 0.56
PDGFB-202ENST00000381551 MKRN1Q9UHC7 482 aaKnown RBP18.58■□□□□ 0.56
PDGFB-202ENST00000381551 PATL2C9JE40 543 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms