RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 HNRNPH2P55795 449 aaKnown RBP12.07□□□□□ -0.48
CLCN4-202ENST00000380833 IRX4P78413 519 aa12.07□□□□□ -0.48
CLCN4-202ENST00000380833 SKOR1P84550 965 aa12.07□□□□□ -0.48
CLCN4-202ENST00000380833 EIF2AQ9BY44 585 aaKnown RBP12.07□□□□□ -0.48
CLCN4-202ENST00000380833 UBA7P41226 1012 aa12.06□□□□□ -0.48
CLCN4-202ENST00000380833 PPP1R21Q6ZMI0 780 aa12.06□□□□□ -0.48
CLCN4-202ENST00000380833 PPFIA4O75335 1185 aa12.06□□□□□ -0.48
CLCN4-202ENST00000380833 EXOC1Q9NV70 894 aa12.06□□□□□ -0.48
CLCN4-202ENST00000380833 DDX39AO00148 427 aaKnown RBP12.06□□□□□ -0.48
CLCN4-202ENST00000380833 KRT13P13646 458 aa12.06□□□□□ -0.48
CLCN4-202ENST00000380833 PLCB3Q01970 1234 aa12.06□□□□□ -0.48
CLCN4-202ENST00000380833 PPFIA1Q13136 1202 aa12.06□□□□□ -0.48
CLCN4-202ENST00000380833 TRIM47Q96LD4 638 aa12.06□□□□□ -0.48
CLCN4-202ENST00000380833 CCDC77Q9BR77 488 aa12.06□□□□□ -0.48
CLCN4-202ENST00000380833 RAD50Q92878 1312 aa12.06□□□□□ -0.48
CLCN4-202ENST00000380833 ATICP31939 592 aa12.06□□□□□ -0.48
CLCN4-202ENST00000380833 PPP1R7Q15435 360 aa12.06□□□□□ -0.48
CLCN4-202ENST00000380833 IFIT1BQ5T764 474 aaKnown RBP12.06□□□□□ -0.48
CLCN4-202ENST00000380833 ACBD5Q5T8D3 534 aaPredicted RBP12.06□□□□□ -0.48
CLCN4-202ENST00000380833 RNF34Q969K3 372 aa12.06□□□□□ -0.48
CLCN4-202ENST00000380833 Q9H521 79 aa12.06□□□□□ -0.48
CLCN4-202ENST00000380833 CD109Q6YHK3 1445 aa12.06□□□□□ -0.48
CLCN4-202ENST00000380833 IWS1Q96ST2 819 aa12.06□□□□□ -0.48
CLCN4-202ENST00000380833 CRNKL1Q9BZJ0 848 aaKnown RBP12.06□□□□□ -0.48
CLCN4-202ENST00000380833 RASAL2Q9UJF2 1139 aa12.06□□□□□ -0.48
CLCN4-202ENST00000380833 MFSD4BQ5TF39 518 aa12.05□□□□□ -0.48
CLCN4-202ENST00000380833 NECAB1Q8N987 351 aa12.05□□□□□ -0.48
CLCN4-202ENST00000380833 IARSP41252 1262 aaKnown RBP12.05□□□□□ -0.48
CLCN4-202ENST00000380833 TTF1Q15361 905 aaPredicted RBP12.05□□□□□ -0.48
CLCN4-202ENST00000380833 YIPF3Q9GZM5 350 aa12.05□□□□□ -0.48
CLCN4-202ENST00000380833 RASSF2P50749 326 aa12.05□□□□□ -0.48
CLCN4-202ENST00000380833 E2F5Q15329 346 aa12.05□□□□□ -0.48
CLCN4-202ENST00000380833 UBAP1Q9NZ09 502 aa12.05□□□□□ -0.48
CLCN4-202ENST00000380833 E7EVH7 732 aa12.05□□□□□ -0.48
CLCN4-202ENST00000380833 NBPF14Q5TI25 921 aa12.05□□□□□ -0.48
CLCN4-202ENST00000380833 RNF41Q9H4P4 317 aaPredicted RBP12.05□□□□□ -0.48
CLCN4-202ENST00000380833 ANKRD30BQ9BXX2 1392 aa12.04□□□□□ -0.48
CLCN4-202ENST00000380833 RPGRIP1LQ68CZ1 1315 aa12.04□□□□□ -0.48
CLCN4-202ENST00000380833 GJB2P29033 226 aa12.04□□□□□ -0.48
CLCN4-202ENST00000380833 NAPAP54920 295 aa12.04□□□□□ -0.48
CLCN4-202ENST00000380833 ZKSCAN3Q9BRR0 538 aa12.04□□□□□ -0.48
CLCN4-202ENST00000380833 STK38LQ9Y2H1 464 aa12.04□□□□□ -0.48
CLCN4-202ENST00000380833 GLRX3O76003 335 aaKnown RBP12.04□□□□□ -0.48
CLCN4-202ENST00000380833 KRT9P35527 623 aa12.04□□□□□ -0.48
CLCN4-202ENST00000380833 GABPAQ06546 454 aa12.04□□□□□ -0.48
CLCN4-202ENST00000380833 FERMT1Q9BQL6 677 aa12.04□□□□□ -0.48
CLCN4-202ENST00000380833 DAAM1Q9Y4D1 1078 aa12.04□□□□□ -0.48
CLCN4-202ENST00000380833 ATP2A2P16615 1042 aaKnown RBP12.04□□□□□ -0.48
CLCN4-202ENST00000380833 HPDP32754 393 aaPredicted RBP12.04□□□□□ -0.48
CLCN4-202ENST00000380833 WDR75Q8IWA0 830 aaKnown RBP12.04□□□□□ -0.48
CLCN4-202ENST00000380833 CENPKQ9BS16 269 aa12.04□□□□□ -0.48
CLCN4-202ENST00000380833 KIAA0753Q2KHM9 967 aa12.04□□□□□ -0.48
CLCN4-202ENST00000380833 BRD4O60885 1362 aaPredicted RBP12.04□□□□□ -0.48
CLCN4-202ENST00000380833 GOLGA6BA6NDN3 693 aa12.04□□□□□ -0.48
CLCN4-202ENST00000380833 FGFR1OPO95684 399 aaKnown RBP12.04□□□□□ -0.48
CLCN4-202ENST00000380833 TNNI2P48788 182 aa12.04□□□□□ -0.48
CLCN4-202ENST00000380833 NCBP1Q09161 790 aaKnown RBP12.04□□□□□ -0.48
CLCN4-202ENST00000380833 TRPC3Q13507 836 aa12.04□□□□□ -0.48
CLCN4-202ENST00000380833 RRAGBQ5VZM2 374 aa12.04□□□□□ -0.48
CLCN4-202ENST00000380833 GPR162Q16538 588 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 ERCC5P28715 1186 aaPredicted RBP12.03□□□□□ -0.48
CLCN4-202ENST00000380833 IFI16Q16666 785 aaKnown RBP12.03□□□□□ -0.48
CLCN4-202ENST00000380833 LDHCP07864 332 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 MARCKSP29966 332 aaPredicted RBP12.03□□□□□ -0.48
CLCN4-202ENST00000380833 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.03□□□□□ -0.48
CLCN4-202ENST00000380833 ANO6Q4KMQ2 910 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 ZNF280CQ8ND82 737 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 FRMD4BQ9Y2L6 1034 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 CCDC61Q9Y6R9 512 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 CHUKO15111 745 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 ATP5DP30049 168 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 VSIG1Q86XK7 387 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 CCDC68Q9H2F9 335 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 FAM13AO94988 1023 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 SYT1P21579 422 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 RWDD2BP57060 319 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 RAD51AP2Q09MP3 1159 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 NBPF9Q3BBW0 867 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 FYB2Q5VWT5 728 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 PFDN4Q9NQP4 134 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 ORC3Q9UBD5 711 aaPredicted RBP12.03□□□□□ -0.48
CLCN4-202ENST00000380833 TSC22D4Q9Y3Q8 395 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 PI4KAP2A4QPH2 592 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 GNGT1P63211 74 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 GIMAP6Q6P9H5 292 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.03□□□□□ -0.48
CLCN4-202ENST00000380833 PI4KAP1Q8N8J0 262 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 RNF169Q8NCN4 708 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 TTLL3Q9Y4R7 772 aa12.03□□□□□ -0.48
CLCN4-202ENST00000380833 STAT6P42226 847 aa12.02□□□□□ -0.48
CLCN4-202ENST00000380833 TBC1D5Q92609 795 aa12.02□□□□□ -0.48
CLCN4-202ENST00000380833 ARIH1Q9Y4X5 557 aaPredicted RBP12.02□□□□□ -0.48
CLCN4-202ENST00000380833 TTC21AQ8NDW8 1320 aa12.02□□□□□ -0.48
CLCN4-202ENST00000380833 BASP1P80723 227 aaKnown RBP12.02□□□□□ -0.48
CLCN4-202ENST00000380833 NACA2Q9H009 215 aa12.02□□□□□ -0.48
CLCN4-202ENST00000380833 PHEXP78562 749 aa12.02□□□□□ -0.49
CLCN4-202ENST00000380833 BRD3Q15059 726 aa12.02□□□□□ -0.49
CLCN4-202ENST00000380833 GEN1Q17RS7 908 aa12.02□□□□□ -0.49
CLCN4-202ENST00000380833 BTN2A1Q7KYR7 527 aa12.02□□□□□ -0.49
CLCN4-202ENST00000380833 LRRC59Q96AG4 307 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms