RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 PNMA8AQ86V59 439 aaPredicted RBP15.32■□□□□ 0.04
SMN1-202ENST00000380707 MAST2Q6P0Q8 1798 aa15.31■□□□□ 0.04
SMN1-202ENST00000380707 GPR75-ASB3A0A0A6YYF3 556 aa15.31■□□□□ 0.04
SMN1-202ENST00000380707 RNF113AO15541 343 aaKnown RBP15.31■□□□□ 0.04
SMN1-202ENST00000380707 UBE3CQ15386 1083 aa15.31■□□□□ 0.04
SMN1-202ENST00000380707 ZSCAN25Q6NSZ9 544 aa15.31■□□□□ 0.04
SMN1-202ENST00000380707 TMED8Q6PL24 325 aaPredicted RBP15.31■□□□□ 0.04
SMN1-202ENST00000380707 BTDP43251 543 aa15.3■□□□□ 0.04
SMN1-202ENST00000380707 BMP2KLQ5H9B9 411 aa15.3■□□□□ 0.04
SMN1-202ENST00000380707 MIGA1Q8NAN2 632 aa15.3■□□□□ 0.04
SMN1-202ENST00000380707 TDRD3Q9H7E2 651 aaKnown RBP15.3■□□□□ 0.04
SMN1-202ENST00000380707 AATFQ9NY61 560 aaKnown RBP eCLIP15.3■□□□□ 0.04
SMN1-202ENST00000380707 KIF3CO14782 793 aa15.29■□□□□ 0.04
SMN1-202ENST00000380707 ZFYP08048 801 aaPredicted RBP15.29■□□□□ 0.04
SMN1-202ENST00000380707 LRRFIP1Q32MZ4 808 aaKnown RBP15.29■□□□□ 0.04
SMN1-202ENST00000380707 CDC42EP5Q6NZY7 148 aa15.29■□□□□ 0.04
SMN1-202ENST00000380707 PUS7LQ9H0K6 701 aaKnown RBP15.29■□□□□ 0.04
SMN1-202ENST00000380707 MYH7P12883 1935 aa15.28■□□□□ 0.04
SMN1-202ENST00000380707 CLRN2A0PK11 232 aa15.28■□□□□ 0.04
SMN1-202ENST00000380707 PPP4CP60510 307 aa15.28■□□□□ 0.04
SMN1-202ENST00000380707 DYNLL1P63167 89 aaKnown RBP15.28■□□□□ 0.04
SMN1-202ENST00000380707 ANGEL2Q5VTE6 544 aaKnown RBP15.28■□□□□ 0.04
SMN1-202ENST00000380707 OSBP2Q969R2 916 aa15.28■□□□□ 0.04
SMN1-202ENST00000380707 RIOK1Q9BRS2 568 aaKnown RBP15.28■□□□□ 0.04
SMN1-202ENST00000380707 USP40Q9NVE5 1235 aa15.28■□□□□ 0.04
SMN1-202ENST00000380707 ZNF70Q9UC06 446 aaPredicted RBP15.28■□□□□ 0.04
SMN1-202ENST00000380707 PGAP2Q9UHJ9 254 aa15.28■□□□□ 0.04
SMN1-202ENST00000380707 SCAF8Q9UPN6 1271 aaKnown RBP15.28■□□□□ 0.04
SMN1-202ENST00000380707 MYO1BO43795 1136 aa15.27■□□□□ 0.04
SMN1-202ENST00000380707 BAG3O95817 575 aa15.27■□□□□ 0.04
SMN1-202ENST00000380707 CACNB3P54284 484 aa15.27■□□□□ 0.04
SMN1-202ENST00000380707 RHBDL3P58872 404 aa15.27■□□□□ 0.04
SMN1-202ENST00000380707 SPDYE2Q495Y8 402 aa15.27■□□□□ 0.04
SMN1-202ENST00000380707 ZMYM1Q5SVZ6 1142 aa15.27■□□□□ 0.04
SMN1-202ENST00000380707 TICAM2Q86XR7 235 aa15.27■□□□□ 0.04
SMN1-202ENST00000380707 SH3RF3Q8TEJ3 882 aaPredicted RBP15.27■□□□□ 0.04
SMN1-202ENST00000380707 ZC3H15Q8WU90 426 aaKnown RBP15.27■□□□□ 0.04
SMN1-202ENST00000380707 FAM227BQ96M60 508 aa15.27■□□□□ 0.04
SMN1-202ENST00000380707 SEC62Q99442 399 aaKnown RBP15.27■□□□□ 0.04
SMN1-202ENST00000380707 GGA3Q9NZ52 723 aa15.27■□□□□ 0.04
SMN1-202ENST00000380707 CLEC11AQ9Y240 323 aa15.27■□□□□ 0.04
SMN1-202ENST00000380707 RFX7Q2KHR2 1363 aa15.27■□□□□ 0.04
SMN1-202ENST00000380707 AK9Q5TCS8 1911 aa15.27■□□□□ 0.03
SMN1-202ENST00000380707 MAGEB6P1A0A0J9YX57 407 aa15.27■□□□□ 0.03
SMN1-202ENST00000380707 LDHDQ86WU2 507 aa15.27■□□□□ 0.03
SMN1-202ENST00000380707 APPBP2Q92624 585 aa15.27■□□□□ 0.03
SMN1-202ENST00000380707 NOL10Q9BSC4 688 aaKnown RBP15.27■□□□□ 0.03
SMN1-202ENST00000380707 VEZTQ9HBM0 779 aa15.27■□□□□ 0.03
SMN1-202ENST00000380707 A0A0D9SFI3 127 aa15.26■□□□□ 0.03
SMN1-202ENST00000380707 M0R2C6 588 aa15.26■□□□□ 0.03
SMN1-202ENST00000380707 NFIAQ12857 509 aa15.26■□□□□ 0.03
SMN1-202ENST00000380707 NMIQ13287 307 aaPredicted RBP15.26■□□□□ 0.03
SMN1-202ENST00000380707 LCORLQ8N3X6 602 aa15.26■□□□□ 0.03
SMN1-202ENST00000380707 ARMT1Q9H993 441 aa15.26■□□□□ 0.03
SMN1-202ENST00000380707 WDHD1O75717 1129 aaPredicted RBP15.25■□□□□ 0.03
SMN1-202ENST00000380707 MBD4O95243 580 aa15.25■□□□□ 0.03
SMN1-202ENST00000380707 CHMLP26374 656 aa15.25■□□□□ 0.03
SMN1-202ENST00000380707 MAP1SQ66K74 1059 aaPredicted RBP15.25■□□□□ 0.03
SMN1-202ENST00000380707 AIDAQ96BJ3 306 aa15.25■□□□□ 0.03
SMN1-202ENST00000380707 DCPSQ96C86 337 aaKnown RBP15.25■□□□□ 0.03
SMN1-202ENST00000380707 TCP10L2B9ZVM9 353 aa15.24■□□□□ 0.03
SMN1-202ENST00000380707 HIP1O00291 1037 aa15.24■□□□□ 0.03
SMN1-202ENST00000380707 PLCG2P16885 1265 aa15.24■□□□□ 0.03
SMN1-202ENST00000380707 CWC27Q6UX04 472 aaKnown RBP15.24■□□□□ 0.03
SMN1-202ENST00000380707 TEX11Q8IYF3 940 aa15.24■□□□□ 0.03
SMN1-202ENST00000380707 STRBPQ96SI9 672 aaKnown RBP15.24■□□□□ 0.03
SMN1-202ENST00000380707 HELLSQ9NRZ9 838 aa15.24■□□□□ 0.03
SMN1-202ENST00000380707 DIAPH3Q9NSV4 1193 aa15.24■□□□□ 0.03
SMN1-202ENST00000380707 ECM29Q5VYK3 1845 aa15.24■□□□□ 0.03
SMN1-202ENST00000380707 PITPNM2Q9BZ72 1349 aa15.24■□□□□ 0.03
SMN1-202ENST00000380707 GPAA1O43292 621 aa15.23■□□□□ 0.03
SMN1-202ENST00000380707 MCMDC2Q4G0Z9 681 aa15.23■□□□□ 0.03
SMN1-202ENST00000380707 DLK2Q6UY11 383 aa15.23■□□□□ 0.03
SMN1-202ENST00000380707 CCDC129Q6ZRS4 1044 aa15.23■□□□□ 0.03
SMN1-202ENST00000380707 CERS3Q8IU89 383 aa15.23■□□□□ 0.03
SMN1-202ENST00000380707 IDI2Q9BXS1 227 aa15.23■□□□□ 0.03
SMN1-202ENST00000380707 DDX4Q9NQI0 724 aaKnown RBP15.23■□□□□ 0.03
SMN1-202ENST00000380707 TMOD2Q9NZR1 351 aa15.23■□□□□ 0.03
SMN1-202ENST00000380707 FAM198AQ9UFP1 575 aa15.23■□□□□ 0.03
SMN1-202ENST00000380707 CNTNAP1P78357 1384 aa15.23■□□□□ 0.03
SMN1-202ENST00000380707 POLR2AP24928 1970 aaKnown RBP15.23■□□□□ 0.03
SMN1-202ENST00000380707 ADM5C9JUS6 153 aa15.22■□□□□ 0.03
SMN1-202ENST00000380707 PRKAB2O43741 272 aa15.22■□□□□ 0.03
SMN1-202ENST00000380707 TCP10Q12799 353 aa15.22■□□□□ 0.03
SMN1-202ENST00000380707 PICALMQ13492 652 aa15.22■□□□□ 0.03
SMN1-202ENST00000380707 FKBP1CQ5VVH2 108 aa15.22■□□□□ 0.03
SMN1-202ENST00000380707 CHADLQ6NUI6 762 aa15.22■□□□□ 0.03
SMN1-202ENST00000380707 KRT26Q7Z3Y9 468 aa15.22■□□□□ 0.03
SMN1-202ENST00000380707 USP48Q86UV5 1035 aa15.22■□□□□ 0.03
SMN1-202ENST00000380707 APOBEC3FQ8IUX4 373 aaKnown RBP15.22■□□□□ 0.03
SMN1-202ENST00000380707 ZFPM1Q8IX07 1006 aa15.22■□□□□ 0.03
SMN1-202ENST00000380707 TGFBRAP1Q8WUH2 860 aa15.22■□□□□ 0.03
SMN1-202ENST00000380707 GLIS2Q9BZE0 524 aaPredicted RBP15.22■□□□□ 0.03
SMN1-202ENST00000380707 DEFB129Q9H1M3 183 aa15.22■□□□□ 0.03
SMN1-202ENST00000380707 IL25Q9H293 177 aa15.22■□□□□ 0.03
SMN1-202ENST00000380707 TOMM70O94826 608 aa15.22■□□□□ 0.03
SMN1-202ENST00000380707 RASA3Q14644 834 aa15.22■□□□□ 0.03
SMN1-202ENST00000380707 ZNF589Q86UQ0 364 aaPredicted RBP15.22■□□□□ 0.03
SMN1-202ENST00000380707 MAPKAPK5Q8IW41 473 aa15.22■□□□□ 0.03
SMN1-202ENST00000380707 SULF1Q8IWU6 871 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms