RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 DPEP1P16444 411 aa9.21□□□□□ -0.93
CDKL5-202ENST00000379996 CAVIN1Q6NZI2 390 aaKnown RBP9.21□□□□□ -0.93
CDKL5-202ENST00000379996 RUFY3Q7L099 469 aa9.21□□□□□ -0.93
CDKL5-202ENST00000379996 RTKN2Q8IZC4 609 aa9.21□□□□□ -0.93
CDKL5-202ENST00000379996 TLR7Q9NYK1 1049 aaKnown RBP9.21□□□□□ -0.93
CDKL5-202ENST00000379996 PIM2Q9P1W9 311 aa9.21□□□□□ -0.93
CDKL5-202ENST00000379996 HSP90AA1P07900 732 aaKnown RBP9.21□□□□□ -0.94
CDKL5-202ENST00000379996 IL1R1P14778 569 aa9.21□□□□□ -0.94
CDKL5-202ENST00000379996 PDCD7Q8N8D1 485 aaKnown RBP9.21□□□□□ -0.94
CDKL5-202ENST00000379996 ECM29Q5VYK3 1845 aa9.21□□□□□ -0.94
CDKL5-202ENST00000379996 FKBP1AP62942 108 aaKnown RBP9.21□□□□□ -0.94
CDKL5-202ENST00000379996 CCDC158Q5M9N0 1113 aa9.21□□□□□ -0.94
CDKL5-202ENST00000379996 TBC1D16Q8TBP0 767 aa9.21□□□□□ -0.94
CDKL5-202ENST00000379996 DBNDD2Q9BQY9 259 aa9.21□□□□□ -0.94
CDKL5-202ENST00000379996 COL1A1P02452 1464 aaPredicted RBP9.2□□□□□ -0.94
CDKL5-202ENST00000379996 GOLGA6L22H0YM25 854 aa9.2□□□□□ -0.94
CDKL5-202ENST00000379996 GGA1Q9UJY5 639 aa9.2□□□□□ -0.94
CDKL5-202ENST00000379996 PRPF40AO75400 957 aaKnown RBP9.2□□□□□ -0.94
CDKL5-202ENST00000379996 CHRNA5P30532 468 aa9.2□□□□□ -0.94
CDKL5-202ENST00000379996 CCDC102BQ68D86 513 aa9.2□□□□□ -0.94
CDKL5-202ENST00000379996 EVI5LQ96CN4 794 aa9.2□□□□□ -0.94
CDKL5-202ENST00000379996 ATN1P54259 1190 aaPredicted RBP9.19□□□□□ -0.94
CDKL5-202ENST00000379996 COL9A3Q14050 684 aaPredicted RBP9.19□□□□□ -0.94
CDKL5-202ENST00000379996 CCDC93Q567U6 631 aa9.19□□□□□ -0.94
CDKL5-202ENST00000379996 FAM84BQ96KN1 310 aaPredicted RBP9.19□□□□□ -0.94
CDKL5-202ENST00000379996 EYA3Q99504 573 aa9.19□□□□□ -0.94
CDKL5-202ENST00000379996 SBF1O95248 1867 aa9.19□□□□□ -0.94
CDKL5-202ENST00000379996 LARGE1O95461 756 aa9.19□□□□□ -0.94
CDKL5-202ENST00000379996 TIMM10P62072 90 aa9.19□□□□□ -0.94
CDKL5-202ENST00000379996 FOXK1P85037 733 aa9.19□□□□□ -0.94
CDKL5-202ENST00000379996 EVX2Q03828 476 aa9.19□□□□□ -0.94
CDKL5-202ENST00000379996 NECTIN1Q15223 517 aa9.19□□□□□ -0.94
CDKL5-202ENST00000379996 TDRD7Q8NHU6 1098 aaKnown RBP9.19□□□□□ -0.94
CDKL5-202ENST00000379996 FUCA2Q9BTY2 467 aa9.19□□□□□ -0.94
CDKL5-202ENST00000379996 CCDC8Q9H0W5 538 aaPredicted RBP9.19□□□□□ -0.94
CDKL5-202ENST00000379996 ANO2Q9NQ90 1003 aa9.19□□□□□ -0.94
CDKL5-202ENST00000379996 FOCADQ5VW36 1801 aa9.19□□□□□ -0.94
CDKL5-202ENST00000379996 FAM205AQ6ZU69 1335 aa9.19□□□□□ -0.94
CDKL5-202ENST00000379996 ZNF500O60304 480 aaPredicted RBP9.19□□□□□ -0.94
CDKL5-202ENST00000379996 ADORA1P30542 326 aa9.19□□□□□ -0.94
CDKL5-202ENST00000379996 TTF1Q15361 905 aaPredicted RBP9.19□□□□□ -0.94
CDKL5-202ENST00000379996 CAVIN4Q5BKX8 364 aa9.19□□□□□ -0.94
CDKL5-202ENST00000379996 DALRD3Q5D0E6 543 aaKnown RBP9.19□□□□□ -0.94
CDKL5-202ENST00000379996 MPNDQ8N594 471 aa9.19□□□□□ -0.94
CDKL5-202ENST00000379996 BEGAINQ9BUH8 593 aa9.19□□□□□ -0.94
CDKL5-202ENST00000379996 COA1Q9GZY4 146 aa9.19□□□□□ -0.94
CDKL5-202ENST00000379996 GNL3LQ9NVN8 582 aaKnown RBP9.19□□□□□ -0.94
CDKL5-202ENST00000379996 POLLQ9UGP5 575 aa9.19□□□□□ -0.94
CDKL5-202ENST00000379996 TIAM2Q8IVF5 1701 aa9.19□□□□□ -0.94
CDKL5-202ENST00000379996 HIP1O00291 1037 aa9.18□□□□□ -0.94
CDKL5-202ENST00000379996 PTH1RQ03431 593 aa9.18□□□□□ -0.94
CDKL5-202ENST00000379996 MCM6Q14566 821 aa9.18□□□□□ -0.94
CDKL5-202ENST00000379996 ZNF804AQ7Z570 1209 aa9.18□□□□□ -0.94
CDKL5-202ENST00000379996 CNTROBQ8N137 903 aa9.18□□□□□ -0.94
CDKL5-202ENST00000379996 TM6SF1Q9BZW5 370 aa9.18□□□□□ -0.94
CDKL5-202ENST00000379996 TMX4Q9H1E5 349 aaPredicted RBP9.18□□□□□ -0.94
CDKL5-202ENST00000379996 DENND2AQ9ULE3 1009 aa9.18□□□□□ -0.94
CDKL5-202ENST00000379996 NOL7Q9UMY1 257 aaKnown RBP9.18□□□□□ -0.94
CDKL5-202ENST00000379996 GADD45BO75293 160 aaPredicted RBP9.18□□□□□ -0.94
CDKL5-202ENST00000379996 TAF5LO75529 589 aa9.18□□□□□ -0.94
CDKL5-202ENST00000379996 AK2P54819 239 aa9.18□□□□□ -0.94
CDKL5-202ENST00000379996 FKBP4Q02790 459 aaKnown RBP eCLIP9.18□□□□□ -0.94
CDKL5-202ENST00000379996 ZNF622Q969S3 477 aaKnown RBP eCLIP9.18□□□□□ -0.94
CDKL5-202ENST00000379996 RILPL2Q969X0 211 aa9.18□□□□□ -0.94
CDKL5-202ENST00000379996 ALDH8A1Q9H2A2 487 aaPredicted RBP9.18□□□□□ -0.94
CDKL5-202ENST00000379996 ZSWIM6Q9HCJ5 1215 aa9.18□□□□□ -0.94
CDKL5-202ENST00000379996 SUGT1Q9Y2Z0 365 aa9.18□□□□□ -0.94
CDKL5-202ENST00000379996 MBD3O95983 291 aa9.18□□□□□ -0.94
CDKL5-202ENST00000379996 MMP14P50281 582 aa9.18□□□□□ -0.94
CDKL5-202ENST00000379996 TTC39AQ5SRH9 613 aa9.18□□□□□ -0.94
CDKL5-202ENST00000379996 DPP8Q6V1X1 898 aaPredicted RBP9.18□□□□□ -0.94
CDKL5-202ENST00000379996 ZSCAN30Q86W11 494 aa9.18□□□□□ -0.94
CDKL5-202ENST00000379996 UPF3BQ9BZI7 483 aaKnown RBP9.18□□□□□ -0.94
CDKL5-202ENST00000379996 MYO5AQ9Y4I1 1855 aaKnown RBP9.18□□□□□ -0.94
CDKL5-202ENST00000379996 CHD4Q14839 1912 aa9.17□□□□□ -0.94
CDKL5-202ENST00000379996 A0A0G2JLW4 131 aa9.17□□□□□ -0.94
CDKL5-202ENST00000379996 G3V3G9 751 aa9.17□□□□□ -0.94
CDKL5-202ENST00000379996 RFX1P22670 979 aa9.17□□□□□ -0.94
CDKL5-202ENST00000379996 MCCP23508 829 aa9.17□□□□□ -0.94
CDKL5-202ENST00000379996 MCAMP43121 646 aa9.17□□□□□ -0.94
CDKL5-202ENST00000379996 KIAA2012Q0VF49 1180 aa9.17□□□□□ -0.94
CDKL5-202ENST00000379996 ANKIB1Q9P2G1 1089 aa9.17□□□□□ -0.94
CDKL5-202ENST00000379996 DDX60LQ5H9U9 1706 aaKnown RBP9.17□□□□□ -0.94
CDKL5-202ENST00000379996 TRIM6-TRIM34B2RNG4 842 aa9.17□□□□□ -0.94
CDKL5-202ENST00000379996 HIBADHP31937 336 aaKnown RBP9.17□□□□□ -0.94
CDKL5-202ENST00000379996 ADCK5Q3MIX3 580 aa9.17□□□□□ -0.94
CDKL5-202ENST00000379996 COL4A5P29400 1685 aa9.17□□□□□ -0.94
CDKL5-202ENST00000379996 UFL1O94874 794 aa9.17□□□□□ -0.94
CDKL5-202ENST00000379996 MAP4K4O95819 1239 aaPredicted RBP9.17□□□□□ -0.94
CDKL5-202ENST00000379996 PHKA1P46020 1223 aa9.17□□□□□ -0.94
CDKL5-202ENST00000379996 LRRFIP1Q32MZ4 808 aaKnown RBP9.17□□□□□ -0.94
CDKL5-202ENST00000379996 KBTBD3Q8NAB2 608 aa9.17□□□□□ -0.94
CDKL5-202ENST00000379996 SPATA5Q8NB90 893 aa9.17□□□□□ -0.94
CDKL5-202ENST00000379996 NEUROD6Q96NK8 337 aa9.17□□□□□ -0.94
CDKL5-202ENST00000379996 ZFYP08048 801 aaPredicted RBP9.16□□□□□ -0.94
CDKL5-202ENST00000379996 KCNJ4P48050 445 aa9.16□□□□□ -0.94
CDKL5-202ENST00000379996 HIC1Q14526 733 aa9.16□□□□□ -0.94
CDKL5-202ENST00000379996 HELBQ8NG08 1087 aaPredicted RBP9.16□□□□□ -0.94
CDKL5-202ENST00000379996 PAG1Q9NWQ8 432 aa9.16□□□□□ -0.94
CDKL5-202ENST00000379996 HMG20BQ9P0W2 317 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms