RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 RPS8P62241 208 aaKnown RBP17.38■□□□□ 0.37
PRNP-201ENST00000379440 CHMP4CQ96CF2 233 aa17.38■□□□□ 0.37
PRNP-201ENST00000379440 RAI14Q9P0K7 980 aa17.38■□□□□ 0.37
PRNP-201ENST00000379440 ORC3Q9UBD5 711 aaPredicted RBP17.38■□□□□ 0.37
PRNP-201ENST00000379440 CFAP45Q9UL16 551 aa17.38■□□□□ 0.37
PRNP-201ENST00000379440 COL1A1P02452 1464 aaPredicted RBP17.37■□□□□ 0.37
PRNP-201ENST00000379440 DHX16O60231 1041 aaKnown RBP17.37■□□□□ 0.37
PRNP-201ENST00000379440 TDO2P48775 406 aa17.37■□□□□ 0.37
PRNP-201ENST00000379440 VPS37DQ86XT2 251 aa17.37■□□□□ 0.37
PRNP-201ENST00000379440 ZSWIM5Q9P217 1185 aa17.37■□□□□ 0.37
PRNP-201ENST00000379440 RGL2O15211 777 aa17.37■□□□□ 0.37
PRNP-201ENST00000379440 CAVIN4Q5BKX8 364 aa17.37■□□□□ 0.37
PRNP-201ENST00000379440 TPTE2Q6XPS3 522 aa17.37■□□□□ 0.37
PRNP-201ENST00000379440 IGDCC4Q8TDY8 1250 aa17.37■□□□□ 0.37
PRNP-201ENST00000379440 USP28Q96RU2 1077 aa17.37■□□□□ 0.37
PRNP-201ENST00000379440 GNL3LQ9NVN8 582 aaKnown RBP17.37■□□□□ 0.37
PRNP-201ENST00000379440 PNPLA7Q6ZV29 1317 aa17.36■□□□□ 0.37
PRNP-201ENST00000379440 NHSQ6T4R5 1651 aa17.36■□□□□ 0.37
PRNP-201ENST00000379440 KDM4AO75164 1064 aa17.36■□□□□ 0.37
PRNP-201ENST00000379440 CCDC144CPQ8IYA2 1237 aa17.36■□□□□ 0.37
PRNP-201ENST00000379440 BICD2Q8TD16 824 aa17.36■□□□□ 0.37
PRNP-201ENST00000379440 TAOK2Q9UL54 1235 aa17.36■□□□□ 0.37
PRNP-201ENST00000379440 ZMYM6O95789 1325 aa17.36■□□□□ 0.37
PRNP-201ENST00000379440 NR1I2O75469 434 aa17.36■□□□□ 0.37
PRNP-201ENST00000379440 SDR42E1Q8WUS8 393 aa17.36■□□□□ 0.37
PRNP-201ENST00000379440 NUP62CLQ9H1M0 184 aa17.36■□□□□ 0.37
PRNP-201ENST00000379440 METAP2P50579 478 aaKnown RBP eCLIP17.35■□□□□ 0.37
PRNP-201ENST00000379440 AKNAD1Q5T1N1 836 aa17.35■□□□□ 0.37
PRNP-201ENST00000379440 APOA5Q6Q788 366 aa17.35■□□□□ 0.37
PRNP-201ENST00000379440 C8orf76Q96K31 380 aa17.35■□□□□ 0.37
PRNP-201ENST00000379440 MYL10Q9BUA6 226 aa17.35■□□□□ 0.37
PRNP-201ENST00000379440 A0A1B0GUL6 1792 aa17.35■□□□□ 0.37
PRNP-201ENST00000379440 AFF2P51816 1311 aa17.35■□□□□ 0.37
PRNP-201ENST00000379440 GNAT2P19087 354 aa17.35■□□□□ 0.37
PRNP-201ENST00000379440 CDC27P30260 824 aa17.35■□□□□ 0.37
PRNP-201ENST00000379440 TMEM67Q5HYA8 995 aa17.35■□□□□ 0.37
PRNP-201ENST00000379440 RRP12Q5JTH9 1297 aaKnown RBP17.35■□□□□ 0.37
PRNP-201ENST00000379440 MICU3Q86XE3 530 aa17.35■□□□□ 0.37
PRNP-201ENST00000379440 TMEM87BQ96K49 555 aa17.35■□□□□ 0.37
PRNP-201ENST00000379440 NACAP1Q9BZK3 213 aa17.35■□□□□ 0.37
PRNP-201ENST00000379440 LY9Q9HBG7 655 aa17.35■□□□□ 0.37
PRNP-201ENST00000379440 TOMM22Q9NS69 142 aa17.35■□□□□ 0.37
PRNP-201ENST00000379440 TFCP2L1Q9NZI6 479 aa17.35■□□□□ 0.37
PRNP-201ENST00000379440 NFXL1Q6ZNB6 911 aa17.34■□□□□ 0.37
PRNP-201ENST00000379440 FAM196AQ6ZSG2 479 aa17.34■□□□□ 0.37
PRNP-201ENST00000379440 MFSD6Q6ZSS7 791 aa17.34■□□□□ 0.37
PRNP-201ENST00000379440 CKAP2LQ8IYA6 745 aa17.34■□□□□ 0.37
PRNP-201ENST00000379440 RCOR1Q9UKL0 485 aa17.34■□□□□ 0.37
PRNP-201ENST00000379440 SMIM22K7EJ46 135 aa17.34■□□□□ 0.37
PRNP-201ENST00000379440 TM4SF1P30408 202 aa17.34■□□□□ 0.37
PRNP-201ENST00000379440 RFC4P35249 363 aa17.34■□□□□ 0.37
PRNP-201ENST00000379440 SLC51AQ86UW1 340 aa17.34■□□□□ 0.37
PRNP-201ENST00000379440 AIFM3Q96NN9 605 aa17.34■□□□□ 0.37
PRNP-201ENST00000379440 ZKSCAN3Q9BRR0 538 aa17.34■□□□□ 0.37
PRNP-201ENST00000379440 IFIT3O14879 490 aaKnown RBP17.34■□□□□ 0.37
PRNP-201ENST00000379440 NPHP1O15259 732 aa17.34■□□□□ 0.37
PRNP-201ENST00000379440 POLR3DP05423 398 aaPredicted RBP17.34■□□□□ 0.37
PRNP-201ENST00000379440 TRAPPC3LQ5T215 181 aa17.34■□□□□ 0.37
PRNP-201ENST00000379440 SEPT12Q8IYM1 358 aa17.34■□□□□ 0.37
PRNP-201ENST00000379440 FBXO18Q8NFZ0 1043 aa17.34■□□□□ 0.37
PRNP-201ENST00000379440 TNMDQ9H2S6 317 aa17.34■□□□□ 0.37
PRNP-201ENST00000379440 LRRC4BQ9NT99 713 aa17.34■□□□□ 0.37
PRNP-201ENST00000379440 MAGEB6P1A0A0J9YX57 407 aa17.33■□□□□ 0.36
PRNP-201ENST00000379440 DYNLL1P63167 89 aaKnown RBP17.33■□□□□ 0.36
PRNP-201ENST00000379440 MAP3K11Q16584 847 aa17.33■□□□□ 0.36
PRNP-201ENST00000379440 FBXO33Q7Z6M2 555 aa17.33■□□□□ 0.36
PRNP-201ENST00000379440 ZNF384Q8TF68 577 aa17.33■□□□□ 0.36
PRNP-201ENST00000379440 PHKBQ93100 1093 aa17.33■□□□□ 0.36
PRNP-201ENST00000379440 ZFP91Q96JP5 570 aaPredicted RBP17.33■□□□□ 0.36
PRNP-201ENST00000379440 HSPA1LP34931 641 aa17.33■□□□□ 0.36
PRNP-201ENST00000379440 ZNF396Q96N95 335 aaPredicted RBP17.33■□□□□ 0.36
PRNP-201ENST00000379440 MAP7D2Q96T17 732 aa17.33■□□□□ 0.36
PRNP-201ENST00000379440 USP25Q9UHP3 1055 aa17.33■□□□□ 0.36
PRNP-201ENST00000379440 ZHX1Q9UKY1 873 aaPredicted RBP17.33■□□□□ 0.36
PRNP-201ENST00000379440 C4AP0C0L4 1744 aa17.32■□□□□ 0.36
PRNP-201ENST00000379440 C4BP0C0L5 1744 aa17.32■□□□□ 0.36
PRNP-201ENST00000379440 MINDY4BA8MYZ0 360 aa17.32■□□□□ 0.36
PRNP-201ENST00000379440 ZBTB43O43298 467 aa17.32■□□□□ 0.36
PRNP-201ENST00000379440 STAG1Q8WVM7 1258 aa17.32■□□□□ 0.36
PRNP-201ENST00000379440 MYH15Q9Y2K3 1946 aa17.32■□□□□ 0.36
PRNP-201ENST00000379440 UVSSAQ2YD98 709 aa17.32■□□□□ 0.36
PRNP-201ENST00000379440 TXNRD3Q86VQ6 643 aa17.32■□□□□ 0.36
PRNP-201ENST00000379440 RIOK1Q9BRS2 568 aaKnown RBP17.32■□□□□ 0.36
PRNP-201ENST00000379440 KRT23Q9C075 422 aa17.32■□□□□ 0.36
PRNP-201ENST00000379440 CNNM2Q9H8M5 875 aa17.32■□□□□ 0.36
PRNP-201ENST00000379440 FAM217BQ9NTX9 383 aaPredicted RBP17.32■□□□□ 0.36
PRNP-201ENST00000379440 DDX19AQ9NUU7 478 aaKnown RBP17.32■□□□□ 0.36
PRNP-201ENST00000379440 COL24A1Q17RW2 1714 aa17.32■□□□□ 0.36
PRNP-201ENST00000379440 CCDC192P0DO97 292 aa17.31■□□□□ 0.36
PRNP-201ENST00000379440 SGMS1Q86VZ5 419 aa17.31■□□□□ 0.36
PRNP-201ENST00000379440 CLSTN2Q9H4D0 955 aa17.31■□□□□ 0.36
PRNP-201ENST00000379440 TAF1LQ8IZX4 1826 aa17.31■□□□□ 0.36
PRNP-201ENST00000379440 KIF28PB7ZC32 967 aa17.31■□□□□ 0.36
PRNP-201ENST00000379440 LIFRP42702 1097 aa17.31■□□□□ 0.36
PRNP-201ENST00000379440 PPARAQ07869 468 aa17.31■□□□□ 0.36
PRNP-201ENST00000379440 NFIXQ14938 502 aa17.31■□□□□ 0.36
PRNP-201ENST00000379440 JAG2Q9Y219 1238 aa17.31■□□□□ 0.36
PRNP-201ENST00000379440 GOLGA8AA7E2F4 631 aa17.3■□□□□ 0.36
PRNP-201ENST00000379440 UBE2Q2LH0YL09 131 aa17.3■□□□□ 0.36
PRNP-201ENST00000379440 ONECUT3O60422 494 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms