RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 IL25Q9H293 177 aa29.43■■■□□ 2.3
TM6SF1-204ENST00000379390 HACL1Q9UJ83 578 aa29.43■■■□□ 2.3
TM6SF1-204ENST00000379390 BAZ2AQ9UIF9 1905 aaKnown RBP29.42■■■□□ 2.3
TM6SF1-204ENST00000379390 GPR75-ASB3A0A0A6YYF3 556 aa29.42■■■□□ 2.3
TM6SF1-204ENST00000379390 MAGEB6P1A0A0J9YX57 407 aa29.42■■■□□ 2.3
TM6SF1-204ENST00000379390 SPDYE2BA6NHP3 402 aa29.42■■■□□ 2.3
TM6SF1-204ENST00000379390 SPDYE6P0CI01 402 aa29.42■■■□□ 2.3
TM6SF1-204ENST00000379390 PRMT6Q96LA8 375 aaPredicted RBP29.42■■■□□ 2.3
TM6SF1-204ENST00000379390 MMP14P50281 582 aa29.42■■■□□ 2.3
TM6SF1-204ENST00000379390 LCORLQ8N3X6 602 aa29.42■■■□□ 2.3
TM6SF1-204ENST00000379390 AIDAQ96BJ3 306 aa29.42■■■□□ 2.3
TM6SF1-204ENST00000379390 RIOK1Q9BRS2 568 aaKnown RBP29.42■■■□□ 2.3
TM6SF1-204ENST00000379390 ARMT1Q9H993 441 aa29.42■■■□□ 2.3
TM6SF1-204ENST00000379390 HELLSQ9NRZ9 838 aa29.42■■■□□ 2.3
TM6SF1-204ENST00000379390 POTECB2RU33 542 aa29.41■■■□□ 2.3
TM6SF1-204ENST00000379390 NBPF9Q3BBW0 867 aa29.41■■■□□ 2.3
TM6SF1-204ENST00000379390 CASC1Q6TDU7 716 aa29.41■■■□□ 2.3
TM6SF1-204ENST00000379390 ZNF589Q86UQ0 364 aaPredicted RBP29.41■■■□□ 2.3
TM6SF1-204ENST00000379390 MTMR14Q8NCE2 650 aa29.41■■■□□ 2.3
TM6SF1-204ENST00000379390 NAV1Q8NEY1 1877 aa29.4■■■□□ 2.3
TM6SF1-204ENST00000379390 WNT10BO00744 389 aa29.4■■■□□ 2.3
TM6SF1-204ENST00000379390 GPAA1O43292 621 aa29.4■■■□□ 2.3
TM6SF1-204ENST00000379390 BAG3O95817 575 aa29.4■■■□□ 2.3
TM6SF1-204ENST00000379390 MCMDC2Q4G0Z9 681 aa29.4■■■□□ 2.3
TM6SF1-204ENST00000379390 ZBED3Q96IU2 234 aaPredicted RBP29.4■■■□□ 2.3
TM6SF1-204ENST00000379390 ADARB2Q9NS39 739 aaKnown RBP29.4■■■□□ 2.3
TM6SF1-204ENST00000379390 SH3RF3Q8TEJ3 882 aaPredicted RBP29.39■■■□□ 2.3
TM6SF1-204ENST00000379390 TDRD3Q9H7E2 651 aaKnown RBP29.39■■■□□ 2.3
TM6SF1-204ENST00000379390 IQCA1LA6NCM1 817 aa29.38■■■□□ 2.29
TM6SF1-204ENST00000379390 EPHX2P34913 555 aa29.38■■■□□ 2.29
TM6SF1-204ENST00000379390 CDC42EP5Q6NZY7 148 aa29.38■■■□□ 2.29
TM6SF1-204ENST00000379390 RUFY2Q8WXA3 655 aa29.38■■■□□ 2.29
TM6SF1-204ENST00000379390 MYH1P12882 1939 aa29.38■■■□□ 2.29
TM6SF1-204ENST00000379390 RHBDL3P58872 404 aa29.38■■■□□ 2.29
TM6SF1-204ENST00000379390 PPP4CP60510 307 aa29.38■■■□□ 2.29
TM6SF1-204ENST00000379390 ESYT1Q9BSJ8 1104 aa29.38■■■□□ 2.29
TM6SF1-204ENST00000379390 ASTN2O75129 1339 aaPredicted RBP29.37■■■□□ 2.29
TM6SF1-204ENST00000379390 CLRN2A0PK11 232 aa29.37■■■□□ 2.29
TM6SF1-204ENST00000379390 HIRAP54198 1017 aaPredicted RBP29.37■■■□□ 2.29
TM6SF1-204ENST00000379390 TAF1DQ9H5J8 278 aaPredicted RBP29.37■■■□□ 2.29
TM6SF1-204ENST00000379390 RRAGCQ9HB90 399 aa29.37■■■□□ 2.29
TM6SF1-204ENST00000379390 NMRK2Q9NPI5 230 aa29.37■■■□□ 2.29
TM6SF1-204ENST00000379390 USP40Q9NVE5 1235 aa29.37■■■□□ 2.29
TM6SF1-204ENST00000379390 CCDC171Q6TFL3 1326 aa29.36■■■□□ 2.29
TM6SF1-204ENST00000379390 RAD50Q92878 1312 aa29.36■■■□□ 2.29
TM6SF1-204ENST00000379390 SGSM2O43147 1006 aa29.36■■■□□ 2.29
TM6SF1-204ENST00000379390 CACNB3P54284 484 aa29.36■■■□□ 2.29
TM6SF1-204ENST00000379390 STRBPQ96SI9 672 aaKnown RBP29.36■■■□□ 2.29
TM6SF1-204ENST00000379390 PLCG2P16885 1265 aa29.35■■■□□ 2.29
TM6SF1-204ENST00000379390 TEX11Q8IYF3 940 aa29.34■■■□□ 2.29
TM6SF1-204ENST00000379390 DDX60LQ5H9U9 1706 aaKnown RBP29.34■■■□□ 2.29
TM6SF1-204ENST00000379390 PRKAB2O43741 272 aa29.34■■■□□ 2.29
TM6SF1-204ENST00000379390 MYO1BO43795 1136 aa29.34■■■□□ 2.29
TM6SF1-204ENST00000379390 C8orf34Q49A92 452 aa29.34■■■□□ 2.29
TM6SF1-204ENST00000379390 ZNF70Q9UC06 446 aaPredicted RBP29.34■■■□□ 2.29
TM6SF1-204ENST00000379390 VEGFAP15692 232 aaPredicted RBP29.33■■■□□ 2.29
TM6SF1-204ENST00000379390 SPDYE2Q495Y8 402 aa29.33■■■□□ 2.29
TM6SF1-204ENST00000379390 EAPPQ56P03 285 aaPredicted RBP29.33■■■□□ 2.29
TM6SF1-204ENST00000379390 VPS53Q5VIR6 699 aa29.33■■■□□ 2.29
TM6SF1-204ENST00000379390 CERS3Q8IU89 383 aa29.33■■■□□ 2.29
TM6SF1-204ENST00000379390 SDR42E1Q8WUS8 393 aa29.33■■■□□ 2.29
TM6SF1-204ENST00000379390 CRNKL1Q9BZJ0 848 aaKnown RBP29.33■■■□□ 2.29
TM6SF1-204ENST00000379390 SLC4A4Q9Y6R1 1079 aa29.33■■■□□ 2.29
TM6SF1-204ENST00000379390 VEZTQ9HBM0 779 aa29.32■■■□□ 2.28
TM6SF1-204ENST00000379390 WDHD1O75717 1129 aaPredicted RBP29.31■■■□□ 2.28
TM6SF1-204ENST00000379390 USP50Q70EL3 339 aaPredicted RBP29.31■■■□□ 2.28
TM6SF1-204ENST00000379390 TGFBRAP1Q8WUH2 860 aa29.31■■■□□ 2.28
TM6SF1-204ENST00000379390 MFAP1P55081 439 aaKnown RBP29.31■■■□□ 2.28
TM6SF1-204ENST00000379390 NFIAQ12857 509 aa29.31■■■□□ 2.28
TM6SF1-204ENST00000379390 GGA3Q9NZ52 723 aa29.31■■■□□ 2.28
TM6SF1-204ENST00000379390 TMOD2Q9NZR1 351 aa29.31■■■□□ 2.28
TM6SF1-204ENST00000379390 SCAF8Q9UPN6 1271 aaKnown RBP29.31■■■□□ 2.28
TM6SF1-204ENST00000379390 LAMB1P07942 1786 aa29.3■■■□□ 2.28
TM6SF1-204ENST00000379390 FOXP2O15409 715 aa29.3■■■□□ 2.28
TM6SF1-204ENST00000379390 PICALMQ13492 652 aa29.3■■■□□ 2.28
TM6SF1-204ENST00000379390 ANGEL2Q5VTE6 544 aaKnown RBP29.3■■■□□ 2.28
TM6SF1-204ENST00000379390 USP5P45974 858 aa29.29■■■□□ 2.28
TM6SF1-204ENST00000379390 DDX4Q9NQI0 724 aaKnown RBP29.29■■■□□ 2.28
TM6SF1-204ENST00000379390 TCP10L2B9ZVM9 353 aa29.28■■■□□ 2.28
TM6SF1-204ENST00000379390 GNAT2P19087 354 aa29.28■■■□□ 2.28
TM6SF1-204ENST00000379390 PNMA8AQ86V59 439 aaPredicted RBP29.28■■■□□ 2.28
TM6SF1-204ENST00000379390 MAPKAPK5Q8IW41 473 aa29.28■■■□□ 2.28
TM6SF1-204ENST00000379390 GSG1L2A8MUP6 293 aa29.27■■■□□ 2.28
TM6SF1-204ENST00000379390 APPP05067 770 aa29.27■■■□□ 2.28
TM6SF1-204ENST00000379390 POTEIP0CG38 1075 aa29.27■■■□□ 2.28
TM6SF1-204ENST00000379390 POTEJP0CG39 1038 aa29.27■■■□□ 2.28
TM6SF1-204ENST00000379390 HSPD1P10809 573 aaKnown RBP29.27■■■□□ 2.28
TM6SF1-204ENST00000379390 YY1P25490 414 aa29.27■■■□□ 2.28
TM6SF1-204ENST00000379390 TCP10Q12799 353 aa29.27■■■□□ 2.28
TM6SF1-204ENST00000379390 EPB41L4AQ9HCS5 686 aaPredicted RBP29.27■■■□□ 2.28
TM6SF1-204ENST00000379390 ANO2Q9NQ90 1003 aa29.27■■■□□ 2.28
TM6SF1-204ENST00000379390 FLT1P17948 1338 aa29.27■■■□□ 2.28
TM6SF1-204ENST00000379390 LAMA4Q16363 1823 aa29.27■■■□□ 2.28
TM6SF1-204ENST00000379390 GPBP1L1Q9HC44 474 aaPredicted RBP29.27■■■□□ 2.28
TM6SF1-204ENST00000379390 FAM198AQ9UFP1 575 aa29.27■■■□□ 2.28
TM6SF1-204ENST00000379390 PTH1RQ03431 593 aa29.26■■■□□ 2.27
TM6SF1-204ENST00000379390 IDI2Q9BXS1 227 aa29.26■■■□□ 2.27
TM6SF1-204ENST00000379390 KIAA1211Q6ZU35 1233 aa29.25■■■□□ 2.27
TM6SF1-204ENST00000379390 DCP1AQ9NPI6 582 aaPredicted RBP29.25■■■□□ 2.27
TM6SF1-204ENST00000379390 CNTNAP1P78357 1384 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms