RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 HINFPQ9BQA5 517 aa8.65□□□□□ -1.02
GPCPD1-201ENST00000379019 WDHD1O75717 1129 aaPredicted RBP8.65□□□□□ -1.02
GPCPD1-201ENST00000379019 SERPINB2P05120 415 aa8.65□□□□□ -1.02
GPCPD1-201ENST00000379019 ALDH1B1P30837 517 aa8.65□□□□□ -1.02
GPCPD1-201ENST00000379019 ANAPC15P60006 121 aa8.65□□□□□ -1.02
GPCPD1-201ENST00000379019 SLC10A5Q5PT55 438 aa8.65□□□□□ -1.02
GPCPD1-201ENST00000379019 USPL1Q5W0Q7 1092 aa8.65□□□□□ -1.02
GPCPD1-201ENST00000379019 PLEKHA4Q9H4M7 779 aa8.65□□□□□ -1.02
GPCPD1-201ENST00000379019 CLIC4Q9Y696 253 aa8.65□□□□□ -1.02
GPCPD1-201ENST00000379019 AFDNP55196 1824 aaKnown RBP8.65□□□□□ -1.03
GPCPD1-201ENST00000379019 H0YIN7 160 aa8.65□□□□□ -1.03
GPCPD1-201ENST00000379019 TAF5LO75529 589 aa8.65□□□□□ -1.03
GPCPD1-201ENST00000379019 SLC51AQ86UW1 340 aa8.65□□□□□ -1.03
GPCPD1-201ENST00000379019 SYNE4Q8N205 404 aa8.65□□□□□ -1.03
GPCPD1-201ENST00000379019 PLBD2Q8NHP8 589 aa8.65□□□□□ -1.03
GPCPD1-201ENST00000379019 FAM200AQ8TCP9 573 aa8.65□□□□□ -1.03
GPCPD1-201ENST00000379019 NBPF3Q9H094 633 aa8.65□□□□□ -1.03
GPCPD1-201ENST00000379019 WTIPA6NIX2 430 aaPredicted RBP8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 ZNF165P49910 485 aa8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 HNRNPH2P55795 449 aaKnown RBP8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 DALRD3Q5D0E6 543 aaKnown RBP8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 LARP1BQ659C4 914 aaKnown RBP8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 NPR1P16066 1061 aa8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 CASP1P29466 404 aa8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 NDUFA8P51970 172 aa8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 GIGYF2Q6Y7W6 1299 aaKnown RBP8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 CNBD1Q8NA66 436 aa8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 NFIXQ14938 502 aa8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 HDGFL1Q5TGJ6 251 aa8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 APOBRQ0VD83 1088 aa8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 SCARF1Q14162 830 aa8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 SPECC1Q5M775 1068 aa8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 H2AFXP16104 143 aaPredicted RBP8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 RXRAP19793 462 aa8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 MASTLQ96GX5 879 aa8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 SMC3Q9UQE7 1217 aa8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 HDAC5Q9UQL6 1122 aa8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 MAP3K2Q9Y2U5 619 aa8.64□□□□□ -1.03
GPCPD1-201ENST00000379019 ZRANB2O95218 330 aaKnown RBP eCLIP8.63□□□□□ -1.039e-6■□□□□ 10.3
GPCPD1-201ENST00000379019 AIMP1Q12904 312 aaKnown RBP8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 GPR162Q16538 588 aa8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 DDX46Q7L014 1031 aaKnown RBP8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 TDRD7Q8NHU6 1098 aaKnown RBP8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 SMARCE1Q969G3 411 aa8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 CLIP2Q9UDT6 1046 aa8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 UBTFL1P0CB47 393 aaPredicted RBP8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 KCNJ4P48050 445 aa8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 MMP14P50281 582 aa8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 ZNF34Q8IZ26 560 aa8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 STK31Q9BXU1 1019 aa8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 POLD4Q9HCU8 107 aa8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 AKAP11Q9UKA4 1901 aa8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 SNAP23O00161 211 aa8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 SUPT20HQ8NEM7 779 aa8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 CRAMP1Q96RY5 1269 aa8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 SALL1Q9NSC2 1324 aa8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 TULP2O00295 520 aa8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 KIF1BPQ96EK5 621 aa8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 TMX4Q9H1E5 349 aaPredicted RBP8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 TNRC6CQ9HCJ0 1690 aaKnown RBP8.63□□□□□ -1.03
GPCPD1-201ENST00000379019 RFX5P48382 616 aaPredicted RBP8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 CSPP1Q1MSJ5 1256 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 SYT10Q6XYQ8 523 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 CCAR2Q8N163 923 aaKnown RBP8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 TRIM5Q9C035 493 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 EYSQ5T1H1 3165 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 MYH10P35580 1976 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 NOM1Q5C9Z4 860 aaKnown RBP8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 USP49Q70CQ1 688 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 TAF1P21675 1872 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 CCDC69A6NI79 296 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 HOXA10P31260 410 aaPredicted RBP8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 AACSQ86V21 672 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 AOPEPQ8N6M6 819 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 XPO4Q9C0E2 1151 aaKnown RBP8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 SKILP12757 684 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 CCT4P50991 539 aaKnown RBP8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 DDR1Q08345 913 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 CEP135Q66GS9 1140 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 Q6ZUG5 572 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 GRAMD1CQ8IYS0 662 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 RTKN2Q8IZC4 609 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 TTLL6Q8N841 843 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 NSUN7Q8NE18 718 aaKnown RBP8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 DBNDD2Q9BQY9 259 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 UBXN6Q9BZV1 441 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 CLSTN2Q9H4D0 955 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 RTL9Q8NET4 1388 aa8.62□□□□□ -1.03
GPCPD1-201ENST00000379019 RBM17Q96I25 401 aaKnown RBP8.61□□□□□ -1.03
GPCPD1-201ENST00000379019 ZNF594Q96JF6 807 aaPredicted RBP8.61□□□□□ -1.03
GPCPD1-201ENST00000379019 NUP98P52948 1817 aa8.61□□□□□ -1.03
GPCPD1-201ENST00000379019 NBPF5PQ86XG9 351 aaPredicted RBP8.61□□□□□ -1.03
GPCPD1-201ENST00000379019 UTP14AQ9BVJ6 771 aaKnown RBP8.61□□□□□ -1.03
GPCPD1-201ENST00000379019 CDHR2Q9BYE9 1310 aa8.61□□□□□ -1.03
GPCPD1-201ENST00000379019 TIMM10P62072 90 aa8.61□□□□□ -1.03
GPCPD1-201ENST00000379019 PPP1R13BQ96KQ4 1090 aa8.61□□□□□ -1.03
GPCPD1-201ENST00000379019 NUP62CLQ9H1M0 184 aa8.61□□□□□ -1.03
GPCPD1-201ENST00000379019 TBC1D8O95759 1140 aa8.61□□□□□ -1.03
GPCPD1-201ENST00000379019 RPS6KB1P23443 525 aa8.61□□□□□ -1.03
GPCPD1-201ENST00000379019 PCDHA7Q9UN72 937 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms