RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 PI4K2BQ8TCG2 481 aa16.07■□□□□ 0.16
CKAP2-202ENST00000378034 VEZTQ9HBM0 779 aa16.07■□□□□ 0.16
CKAP2-202ENST00000378034 AOX1Q06278 1338 aa16.07■□□□□ 0.16
CKAP2-202ENST00000378034 TNNI2P48788 182 aa16.07■□□□□ 0.16
CKAP2-202ENST00000378034 NOL10Q9BSC4 688 aaKnown RBP16.07■□□□□ 0.16
CKAP2-202ENST00000378034 TRAF5O00463 557 aa16.06■□□□□ 0.16
CKAP2-202ENST00000378034 BAG3O95817 575 aa16.06■□□□□ 0.16
CKAP2-202ENST00000378034 BTDP43251 543 aa16.06■□□□□ 0.16
CKAP2-202ENST00000378034 CDC42EP5Q6NZY7 148 aa16.06■□□□□ 0.16
CKAP2-202ENST00000378034 CENPQQ7L2Z9 268 aaPredicted RBP16.06■□□□□ 0.16
CKAP2-202ENST00000378034 CERS3Q8IU89 383 aa16.06■□□□□ 0.16
CKAP2-202ENST00000378034 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.06■□□□□ 0.16
CKAP2-202ENST00000378034 DEFB129Q9H1M3 183 aa16.06■□□□□ 0.16
CKAP2-202ENST00000378034 USP40Q9NVE5 1235 aa16.06■□□□□ 0.16
CKAP2-202ENST00000378034 TSHZ3Q63HK5 1081 aa16.06■□□□□ 0.16
CKAP2-202ENST00000378034 ZSCAN25Q6NSZ9 544 aa16.06■□□□□ 0.16
CKAP2-202ENST00000378034 FAM83AQ86UY5 434 aa16.06■□□□□ 0.16
CKAP2-202ENST00000378034 CDCA5Q96FF9 252 aa16.06■□□□□ 0.16
CKAP2-202ENST00000378034 OSBPL3Q9H4L5 887 aa16.06■□□□□ 0.16
CKAP2-202ENST00000378034 TMEM88BA6NKF7 163 aa16.05■□□□□ 0.16
CKAP2-202ENST00000378034 PLCG2P16885 1265 aa16.05■□□□□ 0.16
CKAP2-202ENST00000378034 PPP4CP60510 307 aa16.05■□□□□ 0.16
CKAP2-202ENST00000378034 MAGEB6Q8N7X4 407 aa16.05■□□□□ 0.16
CKAP2-202ENST00000378034 CYP7A1P22680 504 aa16.04■□□□□ 0.16
CKAP2-202ENST00000378034 SLC9C2Q5TAH2 1124 aa16.04■□□□□ 0.16
CKAP2-202ENST00000378034 EDC3Q96F86 508 aaKnown RBP16.04■□□□□ 0.16
CKAP2-202ENST00000378034 IDI2Q9BXS1 227 aa16.04■□□□□ 0.16
CKAP2-202ENST00000378034 CREBZFQ9NS37 354 aa16.04■□□□□ 0.16
CKAP2-202ENST00000378034 MYH7P12883 1935 aa16.04■□□□□ 0.16
CKAP2-202ENST00000378034 TCP10L2B9ZVM9 353 aa16.04■□□□□ 0.16
CKAP2-202ENST00000378034 NPM3O75607 178 aaKnown RBP16.04■□□□□ 0.16
CKAP2-202ENST00000378034 CELF2O95319 508 aaKnown RBP16.04■□□□□ 0.16
CKAP2-202ENST00000378034 PDE6AP16499 860 aa16.04■□□□□ 0.16
CKAP2-202ENST00000378034 NF2P35240 595 aa16.04■□□□□ 0.16
CKAP2-202ENST00000378034 RASA3Q14644 834 aa16.04■□□□□ 0.16
CKAP2-202ENST00000378034 LRRFIP1Q32MZ4 808 aaKnown RBP16.04■□□□□ 0.16
CKAP2-202ENST00000378034 PLEKHM2Q8IWE5 1019 aa16.04■□□□□ 0.16
CKAP2-202ENST00000378034 KBTBD3Q8NAB2 608 aa16.04■□□□□ 0.16
CKAP2-202ENST00000378034 CCDC136Q96JN2 1154 aa16.04■□□□□ 0.16
CKAP2-202ENST00000378034 RHBDL3P58872 404 aa16.03■□□□□ 0.16
CKAP2-202ENST00000378034 SUPT20HL1Q3ZLR7 823 aa16.03■□□□□ 0.16
CKAP2-202ENST00000378034 CST9Q5W186 159 aa16.03■□□□□ 0.16
CKAP2-202ENST00000378034 TICAM2Q86XR7 235 aa16.03■□□□□ 0.16
CKAP2-202ENST00000378034 FKBP1BP68106 108 aa16.02■□□□□ 0.16
CKAP2-202ENST00000378034 FMR1Q06787 632 aaKnown RBP eCLIP16.02■□□□□ 0.16
CKAP2-202ENST00000378034 UBE3CQ15386 1083 aa16.02■□□□□ 0.16
CKAP2-202ENST00000378034 ADGRA1Q86SQ6 560 aa16.02■□□□□ 0.16
CKAP2-202ENST00000378034 FAM151AQ8WW52 585 aa16.02■□□□□ 0.16
CKAP2-202ENST00000378034 SCAF8Q9UPN6 1271 aaKnown RBP16.02■□□□□ 0.16
CKAP2-202ENST00000378034 CNTNAP1P78357 1384 aa16.02■□□□□ 0.15
CKAP2-202ENST00000378034 RFX7Q2KHR2 1363 aa16.02■□□□□ 0.15
CKAP2-202ENST00000378034 RPAP1Q9BWH6 1393 aaPredicted RBP16.02■□□□□ 0.15
CKAP2-202ENST00000378034 ENTPD3O75355 529 aa16.02■□□□□ 0.15
CKAP2-202ENST00000378034 ZFYP08048 801 aaPredicted RBP16.02■□□□□ 0.15
CKAP2-202ENST00000378034 ADD2P35612 726 aa16.02■□□□□ 0.15
CKAP2-202ENST00000378034 CACNB3P54284 484 aa16.02■□□□□ 0.15
CKAP2-202ENST00000378034 AATFQ9NY61 560 aaKnown RBP eCLIP16.02■□□□□ 0.15
CKAP2-202ENST00000378034 ZNF532Q9HCE3 1301 aa16.01■□□□□ 0.15
CKAP2-202ENST00000378034 TCRBV5S4A2TA0A5A2 114 aa16.01■□□□□ 0.15
CKAP2-202ENST00000378034 DLK2Q6UY11 383 aa16.01■□□□□ 0.15
CKAP2-202ENST00000378034 C2orf69Q8N8R5 385 aa16.01■□□□□ 0.15
CKAP2-202ENST00000378034 EVI5LQ96CN4 794 aa16.01■□□□□ 0.15
CKAP2-202ENST00000378034 HOOK2Q96ED9 719 aa16.01■□□□□ 0.15
CKAP2-202ENST00000378034 ZNF408Q9H9D4 720 aa16.01■□□□□ 0.15
CKAP2-202ENST00000378034 WDHD1O75717 1129 aaPredicted RBP16■□□□□ 0.15
CKAP2-202ENST00000378034 TEX11Q8IYF3 940 aa16■□□□□ 0.15
CKAP2-202ENST00000378034 TEPSINQ96N21 525 aa16■□□□□ 0.15
CKAP2-202ENST00000378034 GBA2Q9HCG7 927 aaPredicted RBP16■□□□□ 0.15
CKAP2-202ENST00000378034 PPP4R2Q9NY27 417 aa16■□□□□ 0.15
CKAP2-202ENST00000378034 FAM198AQ9UFP1 575 aa16■□□□□ 0.15
CKAP2-202ENST00000378034 PAPPA2Q9BXP8 1791 aa16■□□□□ 0.15
CKAP2-202ENST00000378034 PDE4AP27815 886 aa16■□□□□ 0.15
CKAP2-202ENST00000378034 NFIAQ12857 509 aa16■□□□□ 0.15
CKAP2-202ENST00000378034 PRAMEF18Q5VWM3 479 aa16■□□□□ 0.15
CKAP2-202ENST00000378034 SH3RF3Q8TEJ3 882 aaPredicted RBP16■□□□□ 0.15
CKAP2-202ENST00000378034 TMEM39BQ9GZU3 492 aa16■□□□□ 0.15
CKAP2-202ENST00000378034 MAGEB6P1A0A0J9YX57 407 aa15.99■□□□□ 0.15
CKAP2-202ENST00000378034 RNF113AO15541 343 aaKnown RBP15.99■□□□□ 0.15
CKAP2-202ENST00000378034 RGS3P49796 1198 aa15.99■□□□□ 0.15
CKAP2-202ENST00000378034 TLL2Q9Y6L7 1015 aa15.99■□□□□ 0.15
CKAP2-202ENST00000378034 FOCADQ5VW36 1801 aa15.99■□□□□ 0.15
CKAP2-202ENST00000378034 NBPF12Q5TAG4 269 aaPredicted RBP15.98■□□□□ 0.15
CKAP2-202ENST00000378034 MIGA1Q8NAN2 632 aa15.98■□□□□ 0.15
CKAP2-202ENST00000378034 HHIPL1Q96JK4 782 aa15.98■□□□□ 0.15
CKAP2-202ENST00000378034 RIOK1Q9BRS2 568 aaKnown RBP15.98■□□□□ 0.15
CKAP2-202ENST00000378034 FSD1Q9BTV5 496 aa15.98■□□□□ 0.15
CKAP2-202ENST00000378034 COL2A1P02458 1487 aaPredicted RBP15.98■□□□□ 0.15
CKAP2-202ENST00000378034 CDK5RAP2Q96SN8 1893 aa15.98■□□□□ 0.15
CKAP2-202ENST00000378034 PPP1R12BO60237 982 aaPredicted RBP15.98■□□□□ 0.15
CKAP2-202ENST00000378034 DYNLL1P63167 89 aaKnown RBP15.98■□□□□ 0.15
CKAP2-202ENST00000378034 TCP10Q12799 353 aa15.98■□□□□ 0.15
CKAP2-202ENST00000378034 ABT1Q9ULW3 272 aaKnown RBP15.98■□□□□ 0.15
CKAP2-202ENST00000378034 ARMC9Q7Z3E5 817 aa15.97■□□□□ 0.15
CKAP2-202ENST00000378034 SAPCD2Q86UD0 394 aa15.97■□□□□ 0.15
CKAP2-202ENST00000378034 APPBP2Q92624 585 aa15.97■□□□□ 0.15
CKAP2-202ENST00000378034 DDX4Q9NQI0 724 aaKnown RBP15.97■□□□□ 0.15
CKAP2-202ENST00000378034 SSC5DA1L4H1 1573 aa15.97■□□□□ 0.15
CKAP2-202ENST00000378034 ATRNL1Q5VV63 1379 aa15.97■□□□□ 0.15
CKAP2-202ENST00000378034 UNCXA6NJT0 531 aa15.96■□□□□ 0.15
CKAP2-202ENST00000378034 PICALMQ13492 652 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms