RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 FOXP4Q8IVH2 680 aaPredicted RBP17.95■□□□□ 0.46
CSNK1A1-202ENST00000377843 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.95■□□□□ 0.46
CSNK1A1-202ENST00000377843 A0A087WUV0 522 aaPredicted RBP17.94■□□□□ 0.46
CSNK1A1-202ENST00000377843 RNF40O75150 1001 aa17.94■□□□□ 0.46
CSNK1A1-202ENST00000377843 ERLIN1O75477 346 aa17.94■□□□□ 0.46
CSNK1A1-202ENST00000377843 GPHNQ9NQX3 736 aaPredicted RBP17.94■□□□□ 0.46
CSNK1A1-202ENST00000377843 PLEKHG3A1L390 1219 aa17.94■□□□□ 0.46
CSNK1A1-202ENST00000377843 CMA1P23946 247 aa17.94■□□□□ 0.46
CSNK1A1-202ENST00000377843 G3BP1Q13283 466 aaKnown RBP eCLIP17.94■□□□□ 0.46
CSNK1A1-202ENST00000377843 MYSM1Q5VVJ2 828 aa17.94■□□□□ 0.46
CSNK1A1-202ENST00000377843 CCDC91Q7Z6B0 441 aa17.94■□□□□ 0.46
CSNK1A1-202ENST00000377843 CEP89Q96ST8 783 aa17.94■□□□□ 0.46
CSNK1A1-202ENST00000377843 AGXT2Q9BYV1 514 aa17.94■□□□□ 0.46
CSNK1A1-202ENST00000377843 EXOC5O00471 708 aa17.93■□□□□ 0.46
CSNK1A1-202ENST00000377843 PRPF6O94906 941 aaKnown RBP17.93■□□□□ 0.46
CSNK1A1-202ENST00000377843 CCDC172P0C7W6 258 aa17.93■□□□□ 0.46
CSNK1A1-202ENST00000377843 EIF4A1P60842 406 aaKnown RBP17.93■□□□□ 0.46
CSNK1A1-202ENST00000377843 HSP90B2PQ58FF3 399 aa17.93■□□□□ 0.46
CSNK1A1-202ENST00000377843 DNAJC21Q5F1R6 531 aaKnown RBP17.93■□□□□ 0.46
CSNK1A1-202ENST00000377843 KCNV1Q6PIU1 500 aa17.93■□□□□ 0.46
CSNK1A1-202ENST00000377843 RAD9BQ6WBX8 426 aa17.93■□□□□ 0.46
CSNK1A1-202ENST00000377843 MAP3K2Q9Y2U5 619 aa17.93■□□□□ 0.46
CSNK1A1-202ENST00000377843 ABL1P00519 1130 aa17.93■□□□□ 0.46
CSNK1A1-202ENST00000377843 LIG3P49916 1009 aa17.93■□□□□ 0.46
CSNK1A1-202ENST00000377843 TEFQ10587 303 aa17.93■□□□□ 0.46
CSNK1A1-202ENST00000377843 NCAPD2Q15021 1401 aa17.93■□□□□ 0.46
CSNK1A1-202ENST00000377843 CEP112Q8N8E3 955 aa17.93■□□□□ 0.46
CSNK1A1-202ENST00000377843 NOA1Q8NC60 698 aaKnown RBP17.93■□□□□ 0.46
CSNK1A1-202ENST00000377843 CEP83Q9Y592 693 aa17.93■□□□□ 0.46
CSNK1A1-202ENST00000377843 POTEB2H3BUK9 544 aa17.92■□□□□ 0.46
CSNK1A1-202ENST00000377843 C19orf44Q9H6X5 657 aa17.92■□□□□ 0.46
CSNK1A1-202ENST00000377843 RGPD8O14715 1765 aaPredicted RBP17.92■□□□□ 0.46
CSNK1A1-202ENST00000377843 SETD1BQ9UPS6 1966 aaKnown RBP17.92■□□□□ 0.46
CSNK1A1-202ENST00000377843 SPECC1LQ69YQ0 1117 aa17.92■□□□□ 0.46
CSNK1A1-202ENST00000377843 RIN2Q8WYP3 895 aaPredicted RBP17.92■□□□□ 0.46
CSNK1A1-202ENST00000377843 TEX13AQ9BXU3 409 aaPredicted RBP17.92■□□□□ 0.46
CSNK1A1-202ENST00000377843 ADGRG1Q9Y653 693 aa17.92■□□□□ 0.46
CSNK1A1-202ENST00000377843 FLT4P35916 1363 aa17.92■□□□□ 0.46
CSNK1A1-202ENST00000377843 APPP05067 770 aa17.91■□□□□ 0.46
CSNK1A1-202ENST00000377843 SYKP43405 635 aa17.91■□□□□ 0.46
CSNK1A1-202ENST00000377843 PROSER3Q2NL68 480 aa17.91■□□□□ 0.46
CSNK1A1-202ENST00000377843 ESCO1Q5FWF5 840 aa17.91■□□□□ 0.46
CSNK1A1-202ENST00000377843 FBXW10Q5XX13 1052 aa17.91■□□□□ 0.46
CSNK1A1-202ENST00000377843 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.91■□□□□ 0.46
CSNK1A1-202ENST00000377843 METTL16Q86W50 562 aaKnown RBP17.91■□□□□ 0.46
CSNK1A1-202ENST00000377843 FOXN1O15353 648 aa17.91■□□□□ 0.46
CSNK1A1-202ENST00000377843 FMR1Q06787 632 aaKnown RBP eCLIP17.91■□□□□ 0.46
CSNK1A1-202ENST00000377843 ZNF569Q5MCW4 686 aa17.91■□□□□ 0.46
CSNK1A1-202ENST00000377843 ANO1Q5XXA6 986 aa17.91■□□□□ 0.46
CSNK1A1-202ENST00000377843 SHC4Q6S5L8 630 aa17.91■□□□□ 0.46
CSNK1A1-202ENST00000377843 AFAP1L1Q8TED9 768 aa17.91■□□□□ 0.46
CSNK1A1-202ENST00000377843 DIP2AQ14689 1571 aa17.91■□□□□ 0.46
CSNK1A1-202ENST00000377843 NALCNQ8IZF0 1738 aa17.91■□□□□ 0.46
CSNK1A1-202ENST00000377843 SBNO1A3KN83 1393 aa17.91■□□□□ 0.46
CSNK1A1-202ENST00000377843 KDM4FA0A1W2PPD8 638 aa17.9■□□□□ 0.46
CSNK1A1-202ENST00000377843 CCDC175P0C221 793 aa17.9■□□□□ 0.46
CSNK1A1-202ENST00000377843 HNRNPH1P31943 449 aaKnown RBP17.9■□□□□ 0.46
CSNK1A1-202ENST00000377843 ORAI2Q96SN7 254 aa17.9■□□□□ 0.46
CSNK1A1-202ENST00000377843 MED4Q9NPJ6 270 aa17.9■□□□□ 0.46
CSNK1A1-202ENST00000377843 HPSEQ9Y251 543 aa17.9■□□□□ 0.46
CSNK1A1-202ENST00000377843 ZC3H4Q9UPT8 1303 aaKnown RBP17.9■□□□□ 0.46
CSNK1A1-202ENST00000377843 BANK1Q8NDB2 785 aa17.9■□□□□ 0.46
CSNK1A1-202ENST00000377843 BABAM1Q9NWV8 329 aa17.9■□□□□ 0.46
CSNK1A1-202ENST00000377843 DBNLQ9UJU6 430 aaKnown RBP17.9■□□□□ 0.46
CSNK1A1-202ENST00000377843 USP6P35125 1406 aa17.9■□□□□ 0.46
CSNK1A1-202ENST00000377843 ERLIN2O94905 339 aa17.89■□□□□ 0.46
CSNK1A1-202ENST00000377843 AMPHP49418 695 aa17.89■□□□□ 0.46
CSNK1A1-202ENST00000377843 EIF5P55010 431 aaKnown RBP17.89■□□□□ 0.46
CSNK1A1-202ENST00000377843 KIF4BQ2VIQ3 1234 aa17.89■□□□□ 0.46
CSNK1A1-202ENST00000377843 MCMDC2Q4G0Z9 681 aa17.89■□□□□ 0.46
CSNK1A1-202ENST00000377843 TTLL5Q6EMB2 1281 aa17.89■□□□□ 0.46
CSNK1A1-202ENST00000377843 C8orf76Q96K31 380 aa17.89■□□□□ 0.46
CSNK1A1-202ENST00000377843 PROSER2Q86WR7 435 aaPredicted RBP17.89■□□□□ 0.45
CSNK1A1-202ENST00000377843 TRMT44Q8IYL2 757 aaKnown RBP17.89■□□□□ 0.45
CSNK1A1-202ENST00000377843 SLC35F6Q8N357 371 aa17.89■□□□□ 0.45
CSNK1A1-202ENST00000377843 IGSF22Q8N9C0 903 aa17.89■□□□□ 0.45
CSNK1A1-202ENST00000377843 MED15Q96RN5 788 aa17.89■□□□□ 0.45
CSNK1A1-202ENST00000377843 CDC5LQ99459 802 aaKnown RBP17.89■□□□□ 0.45
CSNK1A1-202ENST00000377843 EHD4Q9H223 541 aa17.89■□□□□ 0.45
CSNK1A1-202ENST00000377843 PCDHA5Q9Y5H7 936 aa17.89■□□□□ 0.45
CSNK1A1-202ENST00000377843 CLGNO14967 610 aa17.88■□□□□ 0.45
CSNK1A1-202ENST00000377843 ZNF18P17022 549 aa17.88■□□□□ 0.45
CSNK1A1-202ENST00000377843 MAP2K2P36507 400 aa17.88■□□□□ 0.45
CSNK1A1-202ENST00000377843 RAB11FIP4Q86YS3 637 aa17.88■□□□□ 0.45
CSNK1A1-202ENST00000377843 LGR6Q9HBX8 967 aa17.88■□□□□ 0.45
CSNK1A1-202ENST00000377843 DONSONQ9NYP3 566 aa17.88■□□□□ 0.45
CSNK1A1-202ENST00000377843 E7EWF7 191 aa17.88■□□□□ 0.45
CSNK1A1-202ENST00000377843 HMGB1P09429 215 aaKnown RBP17.88■□□□□ 0.45
CSNK1A1-202ENST00000377843 CCT5P48643 541 aa17.88■□□□□ 0.45
CSNK1A1-202ENST00000377843 AARSP49588 968 aaKnown RBP eCLIP17.88■□□□□ 0.456e-8■■■■■ 30.9
CSNK1A1-202ENST00000377843 NLRP6P59044 892 aa17.88■□□□□ 0.45
CSNK1A1-202ENST00000377843 LONRF3Q496Y0 759 aa17.88■□□□□ 0.45
CSNK1A1-202ENST00000377843 OLFM4Q6UX06 510 aa17.88■□□□□ 0.45
CSNK1A1-202ENST00000377843 DDX46Q7L014 1031 aaKnown RBP17.88■□□□□ 0.45
CSNK1A1-202ENST00000377843 ZNF274Q96GC6 653 aaPredicted RBP17.88■□□□□ 0.45
CSNK1A1-202ENST00000377843 KIF5CO60282 957 aa17.87■□□□□ 0.45
CSNK1A1-202ENST00000377843 ANKRD20A12PQ8NF67 263 aa17.87■□□□□ 0.45
CSNK1A1-202ENST00000377843 RABEP2Q9H5N1 569 aa17.87■□□□□ 0.45
CSNK1A1-202ENST00000377843 NFE2L3Q9Y4A8 694 aa17.87■□□□□ 0.45
CSNK1A1-202ENST00000377843 CDHR2Q9BYE9 1310 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms