RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 CDC27P30260 824 aa13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 RAB11FIP4Q86YS3 637 aa13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 ALG1Q9BT22 464 aa13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 LY9Q9HBG7 655 aa13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 KCND1Q9NSA2 647 aa13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 NID2Q14112 1375 aa13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 MYO5AQ9Y4I1 1855 aaKnown RBP13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 A0A087WWV3 80 aa13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 B4E1Z4 1266 aa13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 EXOC5O00471 708 aa13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 WDHD1O75717 1129 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 APPP05067 770 aa13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 PTPAQ15257 358 aa13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 KRT40Q6A162 431 aa13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 CPLX2Q6PUV4 134 aaKnown RBP13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 IFNL3Q8IZI9 196 aa13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 AIDAQ96BJ3 306 aa13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 OSBPL5Q9H0X9 879 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 SENP2Q9HC62 589 aa13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 HPSEQ9Y251 543 aa13.64□□□□□ -0.23
TNFRSF9-201ENST00000377507 STK36Q9NRP7 1315 aa13.63□□□□□ -0.23
TNFRSF9-201ENST00000377507 DOCK2Q92608 1830 aa13.63□□□□□ -0.23
TNFRSF9-201ENST00000377507 ZBTB43O43298 467 aa13.63□□□□□ -0.23
TNFRSF9-201ENST00000377507 SLC5A1P13866 664 aa13.63□□□□□ -0.23
TNFRSF9-201ENST00000377507 PFKFB1P16118 471 aa13.63□□□□□ -0.23
TNFRSF9-201ENST00000377507 MAP3K12Q12852 859 aa13.63□□□□□ -0.23
TNFRSF9-201ENST00000377507 DPCR1Q3MIW9 517 aa13.63□□□□□ -0.23
TNFRSF9-201ENST00000377507 VPS37DQ86XT2 251 aa13.63□□□□□ -0.23
TNFRSF9-201ENST00000377507 AOPEPQ8N6M6 819 aa13.63□□□□□ -0.23
TNFRSF9-201ENST00000377507 ERCC4Q92889 916 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF9-201ENST00000377507 AIFM3Q96NN9 605 aa13.63□□□□□ -0.23
TNFRSF9-201ENST00000377507 MAP3K14Q99558 947 aa13.63□□□□□ -0.23
TNFRSF9-201ENST00000377507 EPB41L4AQ9HCS5 686 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF9-201ENST00000377507 RTL9Q8NET4 1388 aa13.63□□□□□ -0.23
TNFRSF9-201ENST00000377507 SLC3A2P08195 630 aaKnown RBP13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 NLRP12P59046 1061 aa13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 RASGRF1Q13972 1273 aa13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 SUSD4Q5VX71 490 aa13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 INTS5Q6P9B9 1019 aaKnown RBP13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 MTA3Q9BTC8 594 aa13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 BCL2L12Q9HB09 334 aa13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 IMPACTQ9P2X3 320 aa13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 TUBE1Q9UJT0 475 aa13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 PAXBP1Q9Y5B6 917 aa13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 PNPLA7Q6ZV29 1317 aa13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 TIAM2Q8IVF5 1701 aa13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 GSG1L2A8MUP6 293 aa13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 RANBP6O60518 1105 aaKnown RBP13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 CCZ1BP86790 482 aa13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 CCZ1P86791 482 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 NCAPHQ15003 741 aa13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 NBPF11Q86T75 865 aa13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 TSC1Q92574 1164 aa13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 CNNM2Q9H8M5 875 aa13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 ZSWIM5Q9P217 1185 aa13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 TACC3Q9Y6A5 838 aa13.62□□□□□ -0.23
TNFRSF9-201ENST00000377507 SMTNL1A8MU46 457 aa13.61□□□□□ -0.23
TNFRSF9-201ENST00000377507 IARSP41252 1262 aaKnown RBP13.61□□□□□ -0.23
TNFRSF9-201ENST00000377507 TMEM67Q5HYA8 995 aa13.61□□□□□ -0.23
TNFRSF9-201ENST00000377507 MAGEB6Q8N7X4 407 aa13.61□□□□□ -0.23
TNFRSF9-201ENST00000377507 JMYQ8N9B5 988 aa13.61□□□□□ -0.23
TNFRSF9-201ENST00000377507 HELBQ8NG08 1087 aaPredicted RBP13.61□□□□□ -0.23
TNFRSF9-201ENST00000377507 ANKRD7Q92527 254 aa13.61□□□□□ -0.23
TNFRSF9-201ENST00000377507 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.61□□□□□ -0.23
TNFRSF9-201ENST00000377507 MROH7-TTC4A0A0A0MT08 1334 aa13.61□□□□□ -0.23
TNFRSF9-201ENST00000377507 CCDC69A6NI79 296 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 TNNT1P13805 278 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 GNAT2P19087 354 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 GSDMDP57764 484 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 ARID5BQ14865 1188 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 SYCP1Q15431 976 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 AKNAD1Q5T1N1 836 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 SHC4Q6S5L8 630 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 NYAP1Q6ZVC0 841 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 MICU3Q86XE3 530 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 ELOA2Q8IYF1 753 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 STAG1Q8WVM7 1258 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 PHKBQ93100 1093 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 UTP14AQ9BVJ6 771 aaKnown RBP13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 KRT23Q9C075 422 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 NAPBQ9H115 298 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 GOLGA8AA7E2F4 631 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 IKBKBO14920 756 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 MBD4O95243 580 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 FMNL1O95466 1100 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 SKILP12757 684 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 IFNAR1P17181 557 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 RXRAP19793 462 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 RCAN1P53805 252 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 PARP10Q53GL7 1025 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 RESP18Q5W5W9 173 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 C16orf45Q96MC5 204 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 INCENPQ9NQS7 918 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 SLC12A7Q9Y666 1083 aa13.6□□□□□ -0.23
TNFRSF9-201ENST00000377507 RREB1Q92766 1687 aa13.59□□□□□ -0.23
TNFRSF9-201ENST00000377507 MARCKSP29966 332 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF9-201ENST00000377507 SYKP43405 635 aa13.59□□□□□ -0.23
TNFRSF9-201ENST00000377507 ZRSR1Q15695 479 aaKnown RBP13.59□□□□□ -0.23
TNFRSF9-201ENST00000377507 MPHOSPH8Q99549 860 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms