RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 CCDC171Q6TFL3 1326 aa25.62■■□□□ 1.69
CBWD3-202ENST00000377342 ARMT1Q9H993 441 aa25.62■■□□□ 1.69
CBWD3-202ENST00000377342 MAGEB6P1A0A0J9YX57 407 aa25.61■■□□□ 1.69
CBWD3-202ENST00000377342 PPP4CP60510 307 aa25.61■■□□□ 1.69
CBWD3-202ENST00000377342 DPY19L2Q6NUT2 758 aa25.61■■□□□ 1.69
CBWD3-202ENST00000377342 MTMR14Q8NCE2 650 aa25.61■■□□□ 1.69
CBWD3-202ENST00000377342 RUFY2Q8WXA3 655 aa25.61■■□□□ 1.69
CBWD3-202ENST00000377342 ZBED3Q96IU2 234 aaPredicted RBP25.61■■□□□ 1.69
CBWD3-202ENST00000377342 MYOZ2Q9NPC6 264 aa25.61■■□□□ 1.69
CBWD3-202ENST00000377342 BAZ2AQ9UIF9 1905 aaKnown RBP25.61■■□□□ 1.69
CBWD3-202ENST00000377342 SPDYE2BA6NHP3 402 aa25.61■■□□□ 1.69
CBWD3-202ENST00000377342 FOXP2O15409 715 aa25.61■■□□□ 1.69
CBWD3-202ENST00000377342 SPDYE6P0CI01 402 aa25.61■■□□□ 1.69
CBWD3-202ENST00000377342 EPS15P42566 896 aa25.61■■□□□ 1.69
CBWD3-202ENST00000377342 RHBDL3P58872 404 aa25.61■■□□□ 1.69
CBWD3-202ENST00000377342 AIDAQ96BJ3 306 aa25.61■■□□□ 1.69
CBWD3-202ENST00000377342 MMP14P50281 582 aa25.6■■□□□ 1.69
CBWD3-202ENST00000377342 STRBPQ96SI9 672 aaKnown RBP25.6■■□□□ 1.69
CBWD3-202ENST00000377342 RBM5P52756 815 aaKnown RBP eCLIP25.59■■□□□ 1.69
CBWD3-202ENST00000377342 SH3RF3Q8TEJ3 882 aaPredicted RBP25.59■■□□□ 1.69
CBWD3-202ENST00000377342 PRMT6Q96LA8 375 aaPredicted RBP25.59■■□□□ 1.69
CBWD3-202ENST00000377342 VPS53Q5VIR6 699 aa25.58■■□□□ 1.69
CBWD3-202ENST00000377342 SAMD7Q7Z3H4 446 aa25.58■■□□□ 1.69
CBWD3-202ENST00000377342 LAMA4Q16363 1823 aa25.58■■□□□ 1.69
CBWD3-202ENST00000377342 LAMB1P07942 1786 aa25.58■■□□□ 1.69
CBWD3-202ENST00000377342 SEC24BO95487 1268 aa25.58■■□□□ 1.68
CBWD3-202ENST00000377342 DLGAP5Q15398 846 aa25.58■■□□□ 1.68
CBWD3-202ENST00000377342 CDC42EP5Q6NZY7 148 aa25.58■■□□□ 1.68
CBWD3-202ENST00000377342 TRPM4Q8TD43 1214 aa25.58■■□□□ 1.68
CBWD3-202ENST00000377342 BAG3O95817 575 aa25.57■■□□□ 1.68
CBWD3-202ENST00000377342 TBC1D10BQ4KMP7 808 aaPredicted RBP25.57■■□□□ 1.68
CBWD3-202ENST00000377342 NOL10Q9BSC4 688 aaKnown RBP25.57■■□□□ 1.68
CBWD3-202ENST00000377342 MYH1P12882 1939 aa25.56■■□□□ 1.68
CBWD3-202ENST00000377342 POTECB2RU33 542 aa25.56■■□□□ 1.68
CBWD3-202ENST00000377342 H7C1D1 291 aa25.56■■□□□ 1.68
CBWD3-202ENST00000377342 WNT10BO00744 389 aa25.56■■□□□ 1.68
CBWD3-202ENST00000377342 PRKAB2O43741 272 aa25.56■■□□□ 1.68
CBWD3-202ENST00000377342 KIF4BQ2VIQ3 1234 aa25.56■■□□□ 1.68
CBWD3-202ENST00000377342 LMOD1P29536 600 aaPredicted RBP25.55■■□□□ 1.68
CBWD3-202ENST00000377342 NBPF9Q3BBW0 867 aa25.55■■□□□ 1.68
CBWD3-202ENST00000377342 LSG1Q9H089 658 aaKnown RBP25.55■■□□□ 1.68
CBWD3-202ENST00000377342 EPB41L4AQ9HCS5 686 aaPredicted RBP25.55■■□□□ 1.68
CBWD3-202ENST00000377342 CERS3Q8IU89 383 aa25.55■■□□□ 1.68
CBWD3-202ENST00000377342 SDR42E1Q8WUS8 393 aa25.55■■□□□ 1.68
CBWD3-202ENST00000377342 BACH2Q9BYV9 841 aa25.55■■□□□ 1.68
CBWD3-202ENST00000377342 TDRD3Q9H7E2 651 aaKnown RBP25.55■■□□□ 1.68
CBWD3-202ENST00000377342 WDHD1O75717 1129 aaPredicted RBP25.54■■□□□ 1.68
CBWD3-202ENST00000377342 MFAP1P55081 439 aaKnown RBP25.54■■□□□ 1.68
CBWD3-202ENST00000377342 PTH1RQ03431 593 aa25.54■■□□□ 1.68
CBWD3-202ENST00000377342 RBM26Q5T8P6 1007 aaKnown RBP25.54■■□□□ 1.68
CBWD3-202ENST00000377342 USP40Q9NVE5 1235 aa25.54■■□□□ 1.68
CBWD3-202ENST00000377342 ASTN2O75129 1339 aaPredicted RBP25.53■■□□□ 1.68
CBWD3-202ENST00000377342 GSG1L2A8MUP6 293 aa25.53■■□□□ 1.68
CBWD3-202ENST00000377342 HSPD1P10809 573 aaKnown RBP25.53■■□□□ 1.68
CBWD3-202ENST00000377342 PLCG2P16885 1265 aa25.53■■□□□ 1.68
CBWD3-202ENST00000377342 HIRAP54198 1017 aaPredicted RBP25.53■■□□□ 1.68
CBWD3-202ENST00000377342 SPDYE2Q495Y8 402 aa25.53■■□□□ 1.68
CBWD3-202ENST00000377342 CRNKL1Q9BZJ0 848 aaKnown RBP25.53■■□□□ 1.68
CBWD3-202ENST00000377342 ANO2Q9NQ90 1003 aa25.53■■□□□ 1.68
CBWD3-202ENST00000377342 ADARB2Q9NS39 739 aaKnown RBP25.53■■□□□ 1.68
CBWD3-202ENST00000377342 HACL1Q9UJ83 578 aa25.53■■□□□ 1.68
CBWD3-202ENST00000377342 SLC4A4Q9Y6R1 1079 aa25.53■■□□□ 1.68
CBWD3-202ENST00000377342 CACNB3P54284 484 aa25.52■■□□□ 1.68
CBWD3-202ENST00000377342 TEX11Q8IYF3 940 aa25.52■■□□□ 1.68
CBWD3-202ENST00000377342 SIPA1L1O43166 1804 aa25.52■■□□□ 1.68
CBWD3-202ENST00000377342 CLRN2A0PK11 232 aa25.52■■□□□ 1.68
CBWD3-202ENST00000377342 GNAT2P19087 354 aa25.52■■□□□ 1.68
CBWD3-202ENST00000377342 NFIAQ12857 509 aa25.52■■□□□ 1.68
CBWD3-202ENST00000377342 DDX4Q9NQI0 724 aaKnown RBP25.52■■□□□ 1.68
CBWD3-202ENST00000377342 MKRN1Q9UHC7 482 aaKnown RBP25.52■■□□□ 1.68
CBWD3-202ENST00000377342 POLR2AP24928 1970 aaKnown RBP25.51■■□□□ 1.67
CBWD3-202ENST00000377342 DSCC1Q9BVC3 393 aa25.51■■□□□ 1.67
CBWD3-202ENST00000377342 ZNF70Q9UC06 446 aaPredicted RBP25.51■■□□□ 1.67
CBWD3-202ENST00000377342 FLT1P17948 1338 aa25.5■■□□□ 1.67
CBWD3-202ENST00000377342 EPHX2P34913 555 aa25.5■■□□□ 1.67
CBWD3-202ENST00000377342 TGFBRAP1Q8WUH2 860 aa25.5■■□□□ 1.67
CBWD3-202ENST00000377342 RPAP1Q9BWH6 1393 aaPredicted RBP25.49■■□□□ 1.67
CBWD3-202ENST00000377342 REC8O95072 547 aa25.49■■□□□ 1.67
CBWD3-202ENST00000377342 IDI2Q9BXS1 227 aa25.49■■□□□ 1.67
CBWD3-202ENST00000377342 TAF1DQ9H5J8 278 aaPredicted RBP25.49■■□□□ 1.67
CBWD3-202ENST00000377342 DCP1AQ9NPI6 582 aaPredicted RBP25.49■■□□□ 1.67
CBWD3-202ENST00000377342 FAM198AQ9UFP1 575 aa25.49■■□□□ 1.67
CBWD3-202ENST00000377342 IQCA1LA6NCM1 817 aa25.48■■□□□ 1.67
CBWD3-202ENST00000377342 PATL2C9JE40 543 aaKnown RBP25.48■■□□□ 1.67
CBWD3-202ENST00000377342 KIAA1211Q6ZU35 1233 aa25.48■■□□□ 1.67
CBWD3-202ENST00000377342 MAP4K1Q92918 833 aa25.48■■□□□ 1.67
CBWD3-202ENST00000377342 ZMYM6O95789 1325 aa25.48■■□□□ 1.67
CBWD3-202ENST00000377342 MAPKAPK5Q8IW41 473 aa25.48■■□□□ 1.67
CBWD3-202ENST00000377342 IFNL3Q8IZI9 196 aa25.48■■□□□ 1.67
CBWD3-202ENST00000377342 CNTNAP1P78357 1384 aa25.47■■□□□ 1.67
CBWD3-202ENST00000377342 USP5P45974 858 aa25.47■■□□□ 1.67
CBWD3-202ENST00000377342 PICALMQ13492 652 aa25.47■■□□□ 1.67
CBWD3-202ENST00000377342 ATP8A2Q9NTI2 1148 aa25.47■■□□□ 1.67
CBWD3-202ENST00000377342 MYO1BO43795 1136 aa25.46■■□□□ 1.67
CBWD3-202ENST00000377342 APPP05067 770 aa25.45■■□□□ 1.67
CBWD3-202ENST00000377342 ALX1Q15699 326 aa25.45■■□□□ 1.67
CBWD3-202ENST00000377342 GIMAP6Q6P9H5 292 aa25.45■■□□□ 1.67
CBWD3-202ENST00000377342 USP50Q70EL3 339 aaPredicted RBP25.45■■□□□ 1.67
CBWD3-202ENST00000377342 ZNF526Q8TF50 670 aaPredicted RBP25.45■■□□□ 1.67
CBWD3-202ENST00000377342 USP26Q9BXU7 913 aa25.45■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms