RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 PIH1D3Q9NQM4 214 aaKnown RBP15.3■□□□□ 0.04
ACTN1-202ENST00000376839 HPSEQ9Y251 543 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 RIPOR2Q9Y4F9 1068 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 AKAP11Q9UKA4 1901 aa15.29■□□□□ 0.04
ACTN1-202ENST00000376839 B4E1Z4 1266 aa15.29■□□□□ 0.04
ACTN1-202ENST00000376839 TPM4P67936 248 aa15.29■□□□□ 0.04
ACTN1-202ENST00000376839 NKX1-1Q15270 411 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-202ENST00000376839 APOA5Q6Q788 366 aa15.29■□□□□ 0.04
ACTN1-202ENST00000376839 PRDM11Q9NQV5 511 aa15.29■□□□□ 0.04
ACTN1-202ENST00000376839 TUBE1Q9UJT0 475 aa15.29■□□□□ 0.04
ACTN1-202ENST00000376839 MORC2Q9Y6X9 1032 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-202ENST00000376839 ABCC12Q96J65 1359 aa15.29■□□□□ 0.04
ACTN1-202ENST00000376839 KIF2AO00139 706 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-202ENST00000376839 APPP05067 770 aa15.29■□□□□ 0.04
ACTN1-202ENST00000376839 PTPN21Q16825 1174 aa15.29■□□□□ 0.04
ACTN1-202ENST00000376839 MYL10Q9BUA6 226 aa15.29■□□□□ 0.04
ACTN1-202ENST00000376839 PLA2G12BQ9BX93 195 aa15.29■□□□□ 0.04
ACTN1-202ENST00000376839 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.29■□□□□ 0.045e-6■■■■■ 34.6
ACTN1-202ENST00000376839 GREM2Q9H772 168 aa15.29■□□□□ 0.04
ACTN1-202ENST00000376839 INCENPQ9NQS7 918 aa15.29■□□□□ 0.04
ACTN1-202ENST00000376839 PSDA5PKW4 1024 aaPredicted RBP15.28■□□□□ 0.04
ACTN1-202ENST00000376839 IKBKBO14920 756 aa15.28■□□□□ 0.04
ACTN1-202ENST00000376839 IDH1O75874 414 aaKnown RBP15.28■□□□□ 0.04
ACTN1-202ENST00000376839 GPTP24298 496 aa15.28■□□□□ 0.04
ACTN1-202ENST00000376839 TRIM28Q13263 835 aaKnown RBP15.28■□□□□ 0.04
ACTN1-202ENST00000376839 LDHAL6AQ6ZMR3 332 aa15.28■□□□□ 0.04
ACTN1-202ENST00000376839 ZBTB38Q8NAP3 1195 aaPredicted RBP15.28■□□□□ 0.04
ACTN1-202ENST00000376839 MAP3K14Q99558 947 aa15.28■□□□□ 0.04
ACTN1-202ENST00000376839 MYO5AQ9Y4I1 1855 aaKnown RBP15.28■□□□□ 0.04
ACTN1-202ENST00000376839 RANBP6O60518 1105 aaKnown RBP15.28■□□□□ 0.04
ACTN1-202ENST00000376839 ITGA6P23229 1130 aa15.28■□□□□ 0.04
ACTN1-202ENST00000376839 TIGD1Q96MW7 591 aa15.28■□□□□ 0.04
ACTN1-202ENST00000376839 L2HGDHQ9H9P8 463 aa15.28■□□□□ 0.04
ACTN1-202ENST00000376839 GOLGA8FQ08AF8 430 aa15.27■□□□□ 0.04
ACTN1-202ENST00000376839 GOLGA8DPQ0D2H9 430 aa15.27■□□□□ 0.04
ACTN1-202ENST00000376839 DNAJC10Q8IXB1 793 aa15.27■□□□□ 0.04
ACTN1-202ENST00000376839 ZNF532Q9HCE3 1301 aa15.27■□□□□ 0.04
ACTN1-202ENST00000376839 STRCP1A6NGW2 1772 aa15.27■□□□□ 0.03
ACTN1-202ENST00000376839 GNL2Q13823 731 aaKnown RBP15.27■□□□□ 0.03
ACTN1-202ENST00000376839 PPP6R2O75170 966 aa15.26■□□□□ 0.03
ACTN1-202ENST00000376839 UBASH3AP57075 661 aa15.26■□□□□ 0.03
ACTN1-202ENST00000376839 NTRK3Q16288 839 aa15.26■□□□□ 0.03
ACTN1-202ENST00000376839 HLFQ16534 295 aa15.26■□□□□ 0.03
ACTN1-202ENST00000376839 KIF6Q6ZMV9 814 aa15.26■□□□□ 0.03
ACTN1-202ENST00000376839 METTL16Q86W50 562 aaKnown RBP15.26■□□□□ 0.03
ACTN1-202ENST00000376839 FOXP4Q8IVH2 680 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-202ENST00000376839 FAM217BQ9NTX9 383 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-202ENST00000376839 WWC3Q9ULE0 1092 aa15.26■□□□□ 0.03
ACTN1-202ENST00000376839 ATRNO75882 1429 aa15.26■□□□□ 0.03
ACTN1-202ENST00000376839 DCCP43146 1447 aa15.26■□□□□ 0.03
ACTN1-202ENST00000376839 TMEM232C9JQI7 657 aa15.26■□□□□ 0.03
ACTN1-202ENST00000376839 IL2RBP14784 551 aa15.26■□□□□ 0.03
ACTN1-202ENST00000376839 KCNJ6P48051 423 aa15.26■□□□□ 0.03
ACTN1-202ENST00000376839 MYL5Q02045 173 aa15.26■□□□□ 0.03
ACTN1-202ENST00000376839 ERCC6LQ2NKX8 1250 aa15.26■□□□□ 0.03
ACTN1-202ENST00000376839 LONRF3Q496Y0 759 aa15.26■□□□□ 0.03
ACTN1-202ENST00000376839 CCDC93Q567U6 631 aa15.26■□□□□ 0.03
ACTN1-202ENST00000376839 RESP18Q5W5W9 173 aa15.26■□□□□ 0.03
ACTN1-202ENST00000376839 TTLL11Q8NHH1 800 aa15.26■□□□□ 0.03
ACTN1-202ENST00000376839 IGDCC4Q8TDY8 1250 aa15.26■□□□□ 0.03
ACTN1-202ENST00000376839 ECM29Q5VYK3 1845 aa15.26■□□□□ 0.03
ACTN1-202ENST00000376839 UBN2Q6ZU65 1347 aa15.26■□□□□ 0.03
ACTN1-202ENST00000376839 ZBTB43O43298 467 aa15.25■□□□□ 0.03
ACTN1-202ENST00000376839 CDKL5O76039 1030 aa15.25■□□□□ 0.03
ACTN1-202ENST00000376839 PHKA1P46020 1223 aa15.25■□□□□ 0.03
ACTN1-202ENST00000376839 CADPS2Q86UW7 1296 aa15.25■□□□□ 0.03
ACTN1-202ENST00000376839 VGLL2Q8N8G2 317 aa15.25■□□□□ 0.03
ACTN1-202ENST00000376839 LY9Q9HBG7 655 aa15.25■□□□□ 0.03
ACTN1-202ENST00000376839 CNNM1Q9NRU3 951 aa15.25■□□□□ 0.03
ACTN1-202ENST00000376839 ZNF446Q9NWS9 450 aa15.25■□□□□ 0.03
ACTN1-202ENST00000376839 ASAP1Q9ULH1 1129 aa15.25■□□□□ 0.03
ACTN1-202ENST00000376839 COL5A2P05997 1499 aaPredicted RBP15.25■□□□□ 0.03
ACTN1-202ENST00000376839 FOXN1O15353 648 aa15.25■□□□□ 0.03
ACTN1-202ENST00000376839 SERPINC1P01008 464 aa15.25■□□□□ 0.03
ACTN1-202ENST00000376839 PDE6AP16499 860 aa15.25■□□□□ 0.03
ACTN1-202ENST00000376839 NFXL1Q6ZNB6 911 aa15.25■□□□□ 0.03
ACTN1-202ENST00000376839 SHANK3Q9BYB0 1731 aa15.25■□□□□ 0.03
ACTN1-202ENST00000376839 FAM237AA0A1B0GTK4 181 aa15.25■□□□□ 0.03
ACTN1-202ENST00000376839 GOLGA8AA7E2F4 631 aa15.25■□□□□ 0.03
ACTN1-202ENST00000376839 KIF20AO95235 890 aa15.25■□□□□ 0.03
ACTN1-202ENST00000376839 IARSP41252 1262 aaKnown RBP15.25■□□□□ 0.03
ACTN1-202ENST00000376839 CFAP100Q494V2 611 aa15.25■□□□□ 0.03
ACTN1-202ENST00000376839 SPECC1Q5M775 1068 aa15.25■□□□□ 0.03
ACTN1-202ENST00000376839 JMYQ8N9B5 988 aa15.25■□□□□ 0.03
ACTN1-202ENST00000376839 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.25■□□□□ 0.03
ACTN1-202ENST00000376839 FANCGO15287 622 aa15.24■□□□□ 0.03
ACTN1-202ENST00000376839 BMP6P22004 513 aa15.24■□□□□ 0.03
ACTN1-202ENST00000376839 PDE4BQ07343 736 aa15.24■□□□□ 0.03
ACTN1-202ENST00000376839 UBE3CQ15386 1083 aa15.24■□□□□ 0.03
ACTN1-202ENST00000376839 CPLX2Q6PUV4 134 aaKnown RBP15.24■□□□□ 0.03
ACTN1-202ENST00000376839 HOMER1Q86YM7 354 aa15.24■□□□□ 0.03
ACTN1-202ENST00000376839 FANCLQ9NW38 375 aa15.24■□□□□ 0.03
ACTN1-202ENST00000376839 TMOD3Q9NYL9 352 aa15.24■□□□□ 0.03
ACTN1-202ENST00000376839 TACC3Q9Y6A5 838 aa15.24■□□□□ 0.03
ACTN1-202ENST00000376839 TCRBV5S4A2TA0A5A2 114 aa15.24■□□□□ 0.03
ACTN1-202ENST00000376839 NRDCO43847 1150 aa15.24■□□□□ 0.03
ACTN1-202ENST00000376839 CTSWP56202 376 aa15.24■□□□□ 0.03
ACTN1-202ENST00000376839 HSP90AA4PQ58FG1 418 aa15.24■□□□□ 0.03
ACTN1-202ENST00000376839 TMEM67Q5HYA8 995 aa15.24■□□□□ 0.03
ACTN1-202ENST00000376839 CCDC102BQ68D86 513 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms