RNA–Protein interactions for RNA: ENST00000376569.7

DDR1-226, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-226ENST00000376569 TPM3P06753 285 aa14.61□□□□□ -0.07
DDR1-226ENST00000376569 HS1BP3Q53T59 392 aa14.61□□□□□ -0.07
DDR1-226ENST00000376569 KCNG4Q8TDN1 519 aa14.61□□□□□ -0.07
DDR1-226ENST00000376569 SSBP05455 408 aaKnown RBP eCLIP14.6□□□□□ -0.07
DDR1-226ENST00000376569 ZNF771Q7L3S4 317 aaPredicted RBP14.6□□□□□ -0.07
DDR1-226ENST00000376569 LCORLQ8N3X6 602 aa14.6□□□□□ -0.07
DDR1-226ENST00000376569 CTCFLQ8NI51 663 aaPredicted RBP14.6□□□□□ -0.07
DDR1-226ENST00000376569 LPIN2Q92539 896 aa14.6□□□□□ -0.07
DDR1-226ENST00000376569 ZSWIM5Q9P217 1185 aa14.6□□□□□ -0.07
DDR1-226ENST00000376569 KDM6AO15550 1401 aaPredicted RBP14.6□□□□□ -0.07
DDR1-226ENST00000376569 TOP1P11387 765 aaKnown RBP14.6□□□□□ -0.07
DDR1-226ENST00000376569 CYB5R4Q7L1T6 521 aa14.6□□□□□ -0.07
DDR1-226ENST00000376569 TRMT1LQ7Z2T5 733 aaKnown RBP14.6□□□□□ -0.07
DDR1-226ENST00000376569 SETDB2Q96T68 719 aa14.6□□□□□ -0.07
DDR1-226ENST00000376569 ZMYND15Q9H091 742 aa14.6□□□□□ -0.07
DDR1-226ENST00000376569 CCDC87Q9NVE4 849 aa14.6□□□□□ -0.07
DDR1-226ENST00000376569 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.6□□□□□ -0.07
DDR1-226ENST00000376569 LOC102724428A0A0B4J2F2 783 aa14.6□□□□□ -0.07
DDR1-226ENST00000376569 SIK1P57059 783 aa14.6□□□□□ -0.07
DDR1-226ENST00000376569 IKQ13123 557 aaPredicted RBP14.6□□□□□ -0.07
DDR1-226ENST00000376569 CATIPQ7Z7H3 387 aa14.6□□□□□ -0.07
DDR1-226ENST00000376569 FBXO18Q8NFZ0 1043 aa14.6□□□□□ -0.07
DDR1-226ENST00000376569 CACTINQ8WUQ7 758 aaKnown RBP14.6□□□□□ -0.07
DDR1-226ENST00000376569 ZHX1Q9UKY1 873 aaPredicted RBP14.6□□□□□ -0.07
DDR1-226ENST00000376569 CARMIL3Q8ND23 1372 aa14.59□□□□□ -0.07
DDR1-226ENST00000376569 CTAGE5O15320 804 aa14.59□□□□□ -0.07
DDR1-226ENST00000376569 EIF6P56537 245 aaKnown RBP14.59□□□□□ -0.07
DDR1-226ENST00000376569 SRP68Q9UHB9 627 aaKnown RBP14.59□□□□□ -0.07
DDR1-226ENST00000376569 PFKFB1P16118 471 aa14.59□□□□□ -0.07
DDR1-226ENST00000376569 CDC25AP30304 524 aa14.59□□□□□ -0.07
DDR1-226ENST00000376569 RABL6Q3YEC7 729 aaPredicted RBP14.59□□□□□ -0.07
DDR1-226ENST00000376569 CEP135Q66GS9 1140 aa14.59□□□□□ -0.07
DDR1-226ENST00000376569 ZHX3Q9H4I2 956 aa14.59□□□□□ -0.07
DDR1-226ENST00000376569 MON2Q7Z3U7 1717 aa14.59□□□□□ -0.07
DDR1-226ENST00000376569 TCHHQ07283 1943 aa14.59□□□□□ -0.07
DDR1-226ENST00000376569 USP17L12C9JPN9 530 aa14.59□□□□□ -0.07
DDR1-226ENST00000376569 USP17L21D6R901 530 aa14.59□□□□□ -0.07
DDR1-226ENST00000376569 CASP1P29466 404 aa14.59□□□□□ -0.07
DDR1-226ENST00000376569 MCM7P33993 719 aa14.59□□□□□ -0.07
DDR1-226ENST00000376569 CHRNDQ07001 517 aa14.59□□□□□ -0.07
DDR1-226ENST00000376569 XPO4Q9C0E2 1151 aaKnown RBP14.59□□□□□ -0.07
DDR1-226ENST00000376569 PDCL3Q9H2J4 239 aa14.59□□□□□ -0.07
DDR1-226ENST00000376569 CLSTN1O94985 981 aa14.58□□□□□ -0.07
DDR1-226ENST00000376569 CTDNEP1O95476 244 aa14.58□□□□□ -0.07
DDR1-226ENST00000376569 RBM5P52756 815 aaKnown RBP eCLIP14.58□□□□□ -0.07
DDR1-226ENST00000376569 NLRP3Q96P20 1036 aa14.58□□□□□ -0.07
DDR1-226ENST00000376569 C3P01024 1663 aa14.58□□□□□ -0.08
DDR1-226ENST00000376569 VWA3AA6NCI4 1184 aa14.58□□□□□ -0.08
DDR1-226ENST00000376569 RIMBP2O15034 1052 aa14.58□□□□□ -0.08
DDR1-226ENST00000376569 ZNF500O60304 480 aaPredicted RBP14.58□□□□□ -0.08
DDR1-226ENST00000376569 NRXN3Q9Y4C0 1643 aa14.58□□□□□ -0.08
DDR1-226ENST00000376569 FAM170AA1A519 330 aa14.58□□□□□ -0.08
DDR1-226ENST00000376569 SMIM22K7EJ46 135 aa14.58□□□□□ -0.08
DDR1-226ENST00000376569 PICALMQ13492 652 aa14.58□□□□□ -0.08
DDR1-226ENST00000376569 APOA5Q6Q788 366 aa14.58□□□□□ -0.08
DDR1-226ENST00000376569 RNF216Q9NWF9 866 aaPredicted RBP14.58□□□□□ -0.08
DDR1-226ENST00000376569 DNAI1Q9UI46 699 aa14.58□□□□□ -0.08
DDR1-226ENST00000376569 SYT10Q6XYQ8 523 aa14.57□□□□□ -0.08
DDR1-226ENST00000376569 ESR2Q92731 530 aa14.57□□□□□ -0.08
DDR1-226ENST00000376569 EPB41L2O43491 1005 aaKnown RBP14.57□□□□□ -0.08
DDR1-226ENST00000376569 ATP1A3P13637 1013 aa14.57□□□□□ -0.08
DDR1-226ENST00000376569 CDC27P30260 824 aa14.57□□□□□ -0.08
DDR1-226ENST00000376569 RFC4P35249 363 aa14.57□□□□□ -0.08
DDR1-226ENST00000376569 ENOX2Q16206 610 aaKnown RBP14.57□□□□□ -0.08
DDR1-226ENST00000376569 ZSCAN29Q8IWY8 852 aaPredicted RBP14.57□□□□□ -0.08
DDR1-226ENST00000376569 ZNF274Q96GC6 653 aaPredicted RBP14.57□□□□□ -0.08
DDR1-226ENST00000376569 LLPHQ9BRT6 129 aaKnown RBP14.57□□□□□ -0.08
DDR1-226ENST00000376569 SMTNL1A8MU46 457 aa14.56□□□□□ -0.08
DDR1-226ENST00000376569 KIF28PB7ZC32 967 aa14.56□□□□□ -0.08
DDR1-226ENST00000376569 UBAP1LF5GYI3 381 aa14.56□□□□□ -0.08
DDR1-226ENST00000376569 MPHOSPH10O00566 681 aaKnown RBP14.56□□□□□ -0.08
DDR1-226ENST00000376569 PDIA4P13667 645 aaKnown RBP14.56□□□□□ -0.08
DDR1-226ENST00000376569 ADD2P35612 726 aa14.56□□□□□ -0.08
DDR1-226ENST00000376569 CCDC144BQ3MJ40 725 aa14.56□□□□□ -0.08
DDR1-226ENST00000376569 KCNH3Q9ULD8 1083 aa14.56□□□□□ -0.08
DDR1-226ENST00000376569 U2AF2P26368 475 aaKnown RBP eCLIP14.56□□□□□ -0.08
DDR1-226ENST00000376569 KARSQ15046 597 aaKnown RBP14.56□□□□□ -0.08
DDR1-226ENST00000376569 ERFEQ4G0M1 354 aa14.56□□□□□ -0.08
DDR1-226ENST00000376569 SMARCE1Q969G3 411 aa14.56□□□□□ -0.08
DDR1-226ENST00000376569 TMX4Q9H1E5 349 aaPredicted RBP14.56□□□□□ -0.08
DDR1-226ENST00000376569 AKNAD1Q5T1N1 836 aa14.56□□□□□ -0.08
DDR1-226ENST00000376569 RNF41Q9H4P4 317 aaPredicted RBP14.56□□□□□ -0.08
DDR1-226ENST00000376569 SETD1AO15047 1707 aaKnown RBP14.55□□□□□ -0.08
DDR1-226ENST00000376569 NEDD4P46934 1319 aa14.55□□□□□ -0.08
DDR1-226ENST00000376569 USP42Q9H9J4 1324 aaKnown RBP14.55□□□□□ -0.08
DDR1-226ENST00000376569 CCDC196A0A1B0GTZ2 297 aa14.55□□□□□ -0.08
DDR1-226ENST00000376569 SNW1Q13573 536 aaKnown RBP14.55□□□□□ -0.08
DDR1-226ENST00000376569 USPL1Q5W0Q7 1092 aa14.55□□□□□ -0.08
DDR1-226ENST00000376569 SMYD4Q8IYR2 804 aaPredicted RBP14.55□□□□□ -0.08
DDR1-226ENST00000376569 ZNF444Q8N0Y2 327 aaPredicted RBP14.55□□□□□ -0.08
DDR1-226ENST00000376569 KRT23Q9C075 422 aa14.55□□□□□ -0.08
DDR1-226ENST00000376569 UBR1Q8IWV7 1749 aa14.55□□□□□ -0.08
DDR1-226ENST00000376569 COL15A1P39059 1388 aa14.55□□□□□ -0.08
DDR1-226ENST00000376569 GUCY1A2P33402 732 aa14.55□□□□□ -0.08
DDR1-226ENST00000376569 HEATR3Q7Z4Q2 680 aa14.55□□□□□ -0.08
DDR1-226ENST00000376569 BLZF1Q9H2G9 400 aa14.55□□□□□ -0.08
DDR1-226ENST00000376569 KIAA1468Q9P260 1216 aa14.55□□□□□ -0.08
DDR1-226ENST00000376569 LMTK3Q96Q04 1460 aa14.55□□□□□ -0.08
DDR1-226ENST00000376569 MED23Q9ULK4 1368 aa14.55□□□□□ -0.08
DDR1-226ENST00000376569 DYNC1I1O14576 645 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms