RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 GAKO14976 1311 aa13.15□□□□□ -0.3
PDPN-202ENST00000376057 C6orf229H3BNL8 230 aa13.15□□□□□ -0.3
PDPN-202ENST00000376057 PFKFB2O60825 505 aa13.15□□□□□ -0.3
PDPN-202ENST00000376057 TGFB2P61812 414 aa13.15□□□□□ -0.3
PDPN-202ENST00000376057 TMEM87BQ96K49 555 aa13.15□□□□□ -0.3
PDPN-202ENST00000376057 CRNKL1Q9BZJ0 848 aaKnown RBP13.15□□□□□ -0.3
PDPN-202ENST00000376057 PRDX5P30044 214 aa13.15□□□□□ -0.3
PDPN-202ENST00000376057 MROH7-TTC4A0A0A0MT08 1334 aa13.15□□□□□ -0.3
PDPN-202ENST00000376057 NID2Q14112 1375 aa13.15□□□□□ -0.31
PDPN-202ENST00000376057 MYH2Q9UKX2 1941 aa13.14□□□□□ -0.31
PDPN-202ENST00000376057 GPR75-ASB3A0A0A6YYF3 556 aa13.14□□□□□ -0.31
PDPN-202ENST00000376057 A0A0G2JLW4 131 aa13.14□□□□□ -0.31
PDPN-202ENST00000376057 APPP05067 770 aa13.14□□□□□ -0.31
PDPN-202ENST00000376057 TRDNQ13061 729 aa13.14□□□□□ -0.31
PDPN-202ENST00000376057 AKNAD1Q5T1N1 836 aa13.14□□□□□ -0.31
PDPN-202ENST00000376057 DZIP1Q86YF9 867 aaKnown RBP13.14□□□□□ -0.31
PDPN-202ENST00000376057 GTF3C6Q969F1 213 aa13.14□□□□□ -0.31
PDPN-202ENST00000376057 ZNF622Q969S3 477 aaKnown RBP eCLIP13.14□□□□□ -0.31
PDPN-202ENST00000376057 MKRN1Q9UHC7 482 aaKnown RBP13.14□□□□□ -0.31
PDPN-202ENST00000376057 CDK5RAP2Q96SN8 1893 aa13.14□□□□□ -0.31
PDPN-202ENST00000376057 BRCA1P38398 1863 aaKnown RBP13.14□□□□□ -0.31
PDPN-202ENST00000376057 BRD1O95696 1058 aa13.14□□□□□ -0.31
PDPN-202ENST00000376057 BAG3O95817 575 aa13.14□□□□□ -0.31
PDPN-202ENST00000376057 PLCG2P16885 1265 aa13.14□□□□□ -0.31
PDPN-202ENST00000376057 ST3GAL1Q11201 340 aa13.14□□□□□ -0.31
PDPN-202ENST00000376057 CHAF1AQ13111 956 aaPredicted RBP13.14□□□□□ -0.31
PDPN-202ENST00000376057 SLC51AQ86UW1 340 aa13.14□□□□□ -0.31
PDPN-202ENST00000376057 TBC1D10CQ8IV04 446 aa13.14□□□□□ -0.31
PDPN-202ENST00000376057 TNPO1Q92973 898 aaKnown RBP13.14□□□□□ -0.31
PDPN-202ENST00000376057 MTFR1LQ9H019 292 aa13.14□□□□□ -0.31
PDPN-202ENST00000376057 LARGE1O95461 756 aa13.13□□□□□ -0.31
PDPN-202ENST00000376057 RCAN1P53805 252 aa13.13□□□□□ -0.31
PDPN-202ENST00000376057 COL9A3Q14050 684 aaPredicted RBP13.13□□□□□ -0.31
PDPN-202ENST00000376057 SOGA3Q5TF21 947 aa13.13□□□□□ -0.31
PDPN-202ENST00000376057 RALYLQ86SE5 291 aaKnown RBP13.13□□□□□ -0.31
PDPN-202ENST00000376057 PSMD1Q99460 953 aa13.13□□□□□ -0.31
PDPN-202ENST00000376057 TAOK2Q9UL54 1235 aa13.13□□□□□ -0.31
PDPN-202ENST00000376057 ROBO3Q96MS0 1386 aa13.13□□□□□ -0.31
PDPN-202ENST00000376057 ANTXR2P58335 489 aa13.13□□□□□ -0.31
PDPN-202ENST00000376057 MIGA1Q8NAN2 632 aa13.13□□□□□ -0.31
PDPN-202ENST00000376057 GBP4Q96PP9 640 aa13.13□□□□□ -0.31
PDPN-202ENST00000376057 ARPP21Q9UBL0 812 aaPredicted RBP13.13□□□□□ -0.31
PDPN-202ENST00000376057 PRKAB2O43741 272 aa13.12□□□□□ -0.31
PDPN-202ENST00000376057 KCNA3P22001 575 aa13.12□□□□□ -0.31
PDPN-202ENST00000376057 LIFRP42702 1097 aa13.12□□□□□ -0.31
PDPN-202ENST00000376057 TDO2P48775 406 aa13.12□□□□□ -0.31
PDPN-202ENST00000376057 PPARAQ07869 468 aa13.12□□□□□ -0.31
PDPN-202ENST00000376057 RTKN2Q8IZC4 609 aa13.12□□□□□ -0.31
PDPN-202ENST00000376057 NAV1Q8NEY1 1877 aa13.12□□□□□ -0.31
PDPN-202ENST00000376057 PRC1O43663 620 aa13.12□□□□□ -0.31
PDPN-202ENST00000376057 SGMS1Q86VZ5 419 aa13.12□□□□□ -0.31
PDPN-202ENST00000376057 TTLL6Q8N841 843 aa13.12□□□□□ -0.31
PDPN-202ENST00000376057 SMARCC2Q8TAQ2 1214 aa13.12□□□□□ -0.31
PDPN-202ENST00000376057 SMC3Q9UQE7 1217 aa13.12□□□□□ -0.31
PDPN-202ENST00000376057 ZDHHC9Q9Y397 364 aa13.12□□□□□ -0.31
PDPN-202ENST00000376057 WDR33Q9C0J8 1336 aaKnown RBP13.12□□□□□ -0.31
PDPN-202ENST00000376057 ORC4O43929 436 aa13.12□□□□□ -0.31
PDPN-202ENST00000376057 HDLBPQ00341 1268 aaKnown RBP13.12□□□□□ -0.31
PDPN-202ENST00000376057 MFSD6Q6ZSS7 791 aa13.12□□□□□ -0.31
PDPN-202ENST00000376057 DCP1AQ9NPI6 582 aaPredicted RBP13.12□□□□□ -0.31
PDPN-202ENST00000376057 DDX11L8A8MPP1 907 aa13.11□□□□□ -0.31
PDPN-202ENST00000376057 PDCP20941 246 aa13.11□□□□□ -0.31
PDPN-202ENST00000376057 MCM4P33991 863 aa13.11□□□□□ -0.31
PDPN-202ENST00000376057 HAND2P61296 217 aa13.11□□□□□ -0.31
PDPN-202ENST00000376057 DYNLL1P63167 89 aaKnown RBP13.11□□□□□ -0.31
PDPN-202ENST00000376057 KIAA2012Q0VF49 1180 aa13.11□□□□□ -0.31
PDPN-202ENST00000376057 STRIP1Q5VSL9 837 aa13.11□□□□□ -0.31
PDPN-202ENST00000376057 CTR9Q6PD62 1173 aa13.11□□□□□ -0.31
PDPN-202ENST00000376057 TMTC2Q8N394 836 aa13.11□□□□□ -0.31
PDPN-202ENST00000376057 BRF1Q92994 677 aa13.11□□□□□ -0.31
PDPN-202ENST00000376057 GPR101Q96P66 508 aaPredicted RBP13.11□□□□□ -0.31
PDPN-202ENST00000376057 NOL10Q9BSC4 688 aaKnown RBP13.11□□□□□ -0.31
PDPN-202ENST00000376057 PDGFDQ9GZP0 370 aaPredicted RBP13.11□□□□□ -0.31
PDPN-202ENST00000376057 SH2B2O14492 632 aaPredicted RBP13.11□□□□□ -0.31
PDPN-202ENST00000376057 PDIA3P30101 505 aaKnown RBP13.11□□□□□ -0.31
PDPN-202ENST00000376057 CHRNA5P30532 468 aa13.11□□□□□ -0.31
PDPN-202ENST00000376057 MFSD14BQ5SR56 506 aa13.11□□□□□ -0.31
PDPN-202ENST00000376057 HHIPL2Q6UWX4 724 aa13.11□□□□□ -0.31
PDPN-202ENST00000376057 IGDCC4Q8TDY8 1250 aa13.11□□□□□ -0.31
PDPN-202ENST00000376057 CCDC83Q8IWF9 413 aa13.1□□□□□ -0.31
PDPN-202ENST00000376057 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
PDPN-202ENST00000376057 ANGEL1Q9UNK9 670 aaKnown RBP13.1□□□□□ -0.31
PDPN-202ENST00000376057 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.1□□□□□ -0.31
PDPN-202ENST00000376057 NEDD4P46934 1319 aa13.1□□□□□ -0.31
PDPN-202ENST00000376057 SGIP1Q9BQI5 828 aa13.1□□□□□ -0.31
PDPN-202ENST00000376057 AATFQ9NY61 560 aaKnown RBP eCLIP13.1□□□□□ -0.31
PDPN-202ENST00000376057 ECM29Q5VYK3 1845 aa13.09□□□□□ -0.31
PDPN-202ENST00000376057 DHX16O60231 1041 aaKnown RBP13.09□□□□□ -0.31
PDPN-202ENST00000376057 SLC3A2P08195 630 aaKnown RBP13.09□□□□□ -0.31
PDPN-202ENST00000376057 POLD1P28340 1107 aa13.09□□□□□ -0.31
PDPN-202ENST00000376057 HMGN5P82970 282 aaKnown RBP13.09□□□□□ -0.31
PDPN-202ENST00000376057 CCDC93Q567U6 631 aa13.09□□□□□ -0.31
PDPN-202ENST00000376057 TACC3Q9Y6A5 838 aa13.09□□□□□ -0.31
PDPN-202ENST00000376057 BAZ2AQ9UIF9 1905 aaKnown RBP13.09□□□□□ -0.31
PDPN-202ENST00000376057 GRIK5Q16478 980 aa13.09□□□□□ -0.31
PDPN-202ENST00000376057 NOL8Q76FK4 1167 aaKnown RBP13.09□□□□□ -0.31
PDPN-202ENST00000376057 CYB5R4Q7L1T6 521 aa13.09□□□□□ -0.31
PDPN-202ENST00000376057 SDR42E1Q8WUS8 393 aa13.09□□□□□ -0.31
PDPN-202ENST00000376057 UPF1Q92900 1129 aaKnown RBP eCLIP13.09□□□□□ -0.31
PDPN-202ENST00000376057 CD2APQ9Y5K6 639 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms