RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 XPO4Q9C0E2 1151 aaKnown RBP14.95□□□□□ -0.02
MSH5-204ENST00000375755 ARGLU1Q9NWB6 273 aaPredicted RBP14.95□□□□□ -0.02
MSH5-204ENST00000375755 RCOR1Q9UKL0 485 aa14.95□□□□□ -0.02
MSH5-204ENST00000375755 KINO60870 393 aaKnown RBP14.95□□□□□ -0.02
MSH5-204ENST00000375755 FOSBP53539 338 aa14.95□□□□□ -0.02
MSH5-204ENST00000375755 FKBP4Q02790 459 aaKnown RBP eCLIP14.95□□□□□ -0.02
MSH5-204ENST00000375755 HSP90AB3PQ58FF7 597 aa14.95□□□□□ -0.02
MSH5-204ENST00000375755 LDHAL6AQ6ZMR3 332 aa14.95□□□□□ -0.02
MSH5-204ENST00000375755 CCDC73Q6ZRK6 1079 aa14.95□□□□□ -0.02
MSH5-204ENST00000375755 ZSCAN16Q9H4T2 348 aaPredicted RBP14.95□□□□□ -0.02
MSH5-204ENST00000375755 SEC31BQ9NQW1 1179 aa14.95□□□□□ -0.02
MSH5-204ENST00000375755 PAG1Q9NWQ8 432 aa14.95□□□□□ -0.02
MSH5-204ENST00000375755 DNAI1Q9UI46 699 aa14.95□□□□□ -0.02
MSH5-204ENST00000375755 SASH3O75995 380 aa14.94□□□□□ -0.02
MSH5-204ENST00000375755 CIAO1O76071 339 aa14.94□□□□□ -0.02
MSH5-204ENST00000375755 RIC1Q4ADV7 1423 aa14.94□□□□□ -0.02
MSH5-204ENST00000375755 HOMER1Q86YM7 354 aa14.94□□□□□ -0.02
MSH5-204ENST00000375755 CCDC150Q8NCX0 1101 aa14.94□□□□□ -0.02
MSH5-204ENST00000375755 COL4A1P02462 1669 aa14.94□□□□□ -0.02
MSH5-204ENST00000375755 ERVV-1B6SEH8 477 aa14.94□□□□□ -0.02
MSH5-204ENST00000375755 FANCGO15287 622 aa14.94□□□□□ -0.02
MSH5-204ENST00000375755 TADA3O75528 432 aa14.94□□□□□ -0.02
MSH5-204ENST00000375755 TAF5LO75529 589 aa14.94□□□□□ -0.02
MSH5-204ENST00000375755 SMC2O95347 1197 aa14.94□□□□□ -0.02
MSH5-204ENST00000375755 IFIT1P09914 478 aaKnown RBP14.94□□□□□ -0.02
MSH5-204ENST00000375755 SFPQP23246 707 aaKnown RBP eCLIP14.94□□□□□ -0.02
MSH5-204ENST00000375755 ETF1P62495 437 aaKnown RBP14.94□□□□□ -0.02
MSH5-204ENST00000375755 AMIGO3Q86WK7 504 aa14.94□□□□□ -0.02
MSH5-204ENST00000375755 EPC1Q9H2F5 836 aa14.94□□□□□ -0.02
MSH5-204ENST00000375755 IFNKQ9P0W0 207 aa14.94□□□□□ -0.02
MSH5-204ENST00000375755 RIPOR2Q9Y4F9 1068 aa14.94□□□□□ -0.02
MSH5-204ENST00000375755 CDHR2Q9BYE9 1310 aa14.93□□□□□ -0.02
MSH5-204ENST00000375755 THSD7AQ9UPZ6 1657 aa14.93□□□□□ -0.02
MSH5-204ENST00000375755 TBC1D8O95759 1140 aa14.93□□□□□ -0.02
MSH5-204ENST00000375755 OAS2P29728 719 aaKnown RBP14.93□□□□□ -0.02
MSH5-204ENST00000375755 FAM160A1Q05DH4 1040 aa14.93□□□□□ -0.02
MSH5-204ENST00000375755 METTL24Q5JXM2 366 aa14.93□□□□□ -0.02
MSH5-204ENST00000375755 USP28Q96RU2 1077 aa14.93□□□□□ -0.02
MSH5-204ENST00000375755 KCNJ6P48051 423 aa14.93□□□□□ -0.02
MSH5-204ENST00000375755 FSIP1Q8NA03 581 aa14.93□□□□□ -0.02
MSH5-204ENST00000375755 CNNM1Q9NRU3 951 aa14.93□□□□□ -0.02
MSH5-204ENST00000375755 LCMT1Q9UIC8 334 aa14.93□□□□□ -0.02
MSH5-204ENST00000375755 NIP7Q9Y221 180 aaKnown RBP eCLIP14.93□□□□□ -0.02
MSH5-204ENST00000375755 TAF1P21675 1872 aa14.92□□□□□ -0.02
MSH5-204ENST00000375755 BICDL1Q6ZP65 573 aa14.92□□□□□ -0.02
MSH5-204ENST00000375755 KBTBD3Q8NAB2 608 aa14.92□□□□□ -0.02
MSH5-204ENST00000375755 MNS1Q8NEH6 495 aa14.92□□□□□ -0.02
MSH5-204ENST00000375755 CARD6Q9BX69 1037 aa14.92□□□□□ -0.02
MSH5-204ENST00000375755 PDE8AO60658 829 aa14.92□□□□□ -0.02
MSH5-204ENST00000375755 TRIM65Q6PJ69 517 aa14.92□□□□□ -0.02
MSH5-204ENST00000375755 NAT10Q9H0A0 1025 aaKnown RBP14.92□□□□□ -0.02
MSH5-204ENST00000375755 GPR108Q9NPR9 543 aa14.92□□□□□ -0.02
MSH5-204ENST00000375755 RSPH14Q9UHP6 348 aa14.92□□□□□ -0.02
MSH5-204ENST00000375755 PHLPP2Q6ZVD8 1323 aa14.92□□□□□ -0.02
MSH5-204ENST00000375755 ANKRD18BA2A2Z9 1011 aa14.91□□□□□ -0.02
MSH5-204ENST00000375755 HIP1O00291 1037 aa14.91□□□□□ -0.02
MSH5-204ENST00000375755 TRIM66O15016 1216 aa14.91□□□□□ -0.02
MSH5-204ENST00000375755 DPCR1Q3MIW9 517 aa14.91□□□□□ -0.02
MSH5-204ENST00000375755 MYO5AQ9Y4I1 1855 aaKnown RBP14.91□□□□□ -0.02
MSH5-204ENST00000375755 WTIPA6NIX2 430 aaPredicted RBP14.91□□□□□ -0.02
MSH5-204ENST00000375755 URI1O94763 535 aaPredicted RBP14.91□□□□□ -0.02
MSH5-204ENST00000375755 ZSCAN26Q16670 478 aa14.91□□□□□ -0.02
MSH5-204ENST00000375755 C3orf67Q6ZVT6 689 aa14.91□□□□□ -0.02
MSH5-204ENST00000375755 CCDC24Q8N4L8 307 aa14.91□□□□□ -0.02
MSH5-204ENST00000375755 RASSF4Q9H2L5 321 aa14.91□□□□□ -0.02
MSH5-204ENST00000375755 SPEF2Q9C093 1822 aa14.91□□□□□ -0.02
MSH5-204ENST00000375755 COL5A3P25940 1745 aaPredicted RBP14.91□□□□□ -0.02
MSH5-204ENST00000375755 TUBB4AP04350 444 aa14.91□□□□□ -0.02
MSH5-204ENST00000375755 ZAP70P43403 619 aa14.91□□□□□ -0.02
MSH5-204ENST00000375755 TTC39AQ5SRH9 613 aa14.91□□□□□ -0.02
MSH5-204ENST00000375755 HSP90B1P14625 803 aaKnown RBP14.9□□□□□ -0.02
MSH5-204ENST00000375755 SMC1AQ14683 1233 aaKnown RBP14.9□□□□□ -0.02
MSH5-204ENST00000375755 TSGA10IPQ3SY00 556 aa14.9□□□□□ -0.02
MSH5-204ENST00000375755 Q6ZUG5 572 aa14.9□□□□□ -0.02
MSH5-204ENST00000375755 CCDC34Q96HJ3 373 aa14.9□□□□□ -0.02
MSH5-204ENST00000375755 M0R2C6 588 aa14.9□□□□□ -0.02
MSH5-204ENST00000375755 ATP8B1O43520 1251 aa14.9□□□□□ -0.02
MSH5-204ENST00000375755 ME1P48163 572 aa14.9□□□□□ -0.02
MSH5-204ENST00000375755 GYS2P54840 703 aa14.9□□□□□ -0.02
MSH5-204ENST00000375755 EVCP57679 992 aa14.9□□□□□ -0.02
MSH5-204ENST00000375755 SCRN1Q12765 414 aa14.9□□□□□ -0.02
MSH5-204ENST00000375755 CC2D1AQ6P1N0 951 aaPredicted RBP14.9□□□□□ -0.02
MSH5-204ENST00000375755 C10orf67Q8IYJ2 551 aa14.9□□□□□ -0.02
MSH5-204ENST00000375755 VGLL2Q8N8G2 317 aa14.9□□□□□ -0.02
MSH5-204ENST00000375755 HMG20BQ9P0W2 317 aa14.9□□□□□ -0.02
MSH5-204ENST00000375755 EFCAB8A8MWE9 144 aa14.89□□□□□ -0.03
MSH5-204ENST00000375755 MYO1CO00159 1063 aa14.89□□□□□ -0.03
MSH5-204ENST00000375755 MCMDC2Q4G0Z9 681 aa14.89□□□□□ -0.03
MSH5-204ENST00000375755 CCDC158Q5M9N0 1113 aa14.89□□□□□ -0.03
MSH5-204ENST00000375755 REXO1L1PQ8IX06 675 aa14.89□□□□□ -0.03
MSH5-204ENST00000375755 UTP14AQ9BVJ6 771 aaKnown RBP14.89□□□□□ -0.03
MSH5-204ENST00000375755 SRP68Q9UHB9 627 aaKnown RBP14.89□□□□□ -0.03
MSH5-204ENST00000375755 PARP3Q9Y6F1 533 aa14.89□□□□□ -0.03
MSH5-204ENST00000375755 DDX60Q8IY21 1712 aaKnown RBP14.89□□□□□ -0.03
MSH5-204ENST00000375755 TNNT3P45378 269 aaPredicted RBP14.89□□□□□ -0.03
MSH5-204ENST00000375755 IRX3P78415 501 aaPredicted RBP14.89□□□□□ -0.03
MSH5-204ENST00000375755 MEX3CQ5U5Q3 659 aaKnown RBP14.89□□□□□ -0.03
MSH5-204ENST00000375755 FMR1NBQ8N0W7 255 aaPredicted RBP14.89□□□□□ -0.03
MSH5-204ENST00000375755 SMARCC2Q8TAQ2 1214 aa14.89□□□□□ -0.03
MSH5-204ENST00000375755 SDF4Q9BRK5 362 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms