RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 ITGA6P23229 1130 aa20.77■□□□□ 0.91
PHF1-201ENST00000374512 SFPQP23246 707 aaKnown RBP eCLIP20.77■□□□□ 0.91
PHF1-201ENST00000374512 LDHAL6AQ6ZMR3 332 aa20.77■□□□□ 0.91
PHF1-201ENST00000374512 XPO4Q9C0E2 1151 aaKnown RBP20.77■□□□□ 0.91
PHF1-201ENST00000374512 PRDM10Q9NQV6 1147 aa20.77■□□□□ 0.91
PHF1-201ENST00000374512 WNK3Q9BYP7 1800 aa20.76■□□□□ 0.91
PHF1-201ENST00000374512 ZNF397Q8NF99 534 aaPredicted RBP20.76■□□□□ 0.91
PHF1-201ENST00000374512 TTLL11Q8NHH1 800 aa20.76■□□□□ 0.91
PHF1-201ENST00000374512 IFNKQ9P0W0 207 aa20.76■□□□□ 0.91
PHF1-201ENST00000374512 TUBE1Q9UJT0 475 aa20.76■□□□□ 0.91
PHF1-201ENST00000374512 DDX41Q9UJV9 622 aaKnown RBP20.76■□□□□ 0.91
PHF1-201ENST00000374512 AKAP11Q9UKA4 1901 aa20.76■□□□□ 0.91
PHF1-201ENST00000374512 A0A087WWV3 80 aa20.76■□□□□ 0.91
PHF1-201ENST00000374512 ANKRD18BA2A2Z9 1011 aa20.76■□□□□ 0.91
PHF1-201ENST00000374512 EXOC5O00471 708 aa20.76■□□□□ 0.91
PHF1-201ENST00000374512 SMC2O95347 1197 aa20.76■□□□□ 0.91
PHF1-201ENST00000374512 NCAPHQ15003 741 aa20.76■□□□□ 0.91
PHF1-201ENST00000374512 HLFQ16534 295 aa20.76■□□□□ 0.91
PHF1-201ENST00000374512 ERCC4Q92889 916 aaPredicted RBP20.76■□□□□ 0.91
PHF1-201ENST00000374512 SPDYE4A6NLX3 237 aa20.75■□□□□ 0.91
PHF1-201ENST00000374512 KIF28PB7ZC32 967 aa20.75■□□□□ 0.91
PHF1-201ENST00000374512 KIF20AO95235 890 aa20.75■□□□□ 0.91
PHF1-201ENST00000374512 GPTP24298 496 aa20.75■□□□□ 0.91
PHF1-201ENST00000374512 ADD2P35612 726 aa20.75■□□□□ 0.91
PHF1-201ENST00000374512 CTSWP56202 376 aa20.75■□□□□ 0.91
PHF1-201ENST00000374512 UBE3CQ15386 1083 aa20.75■□□□□ 0.91
PHF1-201ENST00000374512 TMEM87BQ96K49 555 aa20.75■□□□□ 0.91
PHF1-201ENST00000374512 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.75■□□□□ 0.91
PHF1-201ENST00000374512 GREM2Q9H772 168 aa20.75■□□□□ 0.91
PHF1-201ENST00000374512 HPSEQ9Y251 543 aa20.75■□□□□ 0.91
PHF1-201ENST00000374512 SLU7O95391 586 aaKnown RBP20.74■□□□□ 0.91
PHF1-201ENST00000374512 SYNE4Q8N205 404 aa20.74■□□□□ 0.91
PHF1-201ENST00000374512 MORC2Q9Y6X9 1032 aaPredicted RBP20.74■□□□□ 0.91
PHF1-201ENST00000374512 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.74■□□□□ 0.91
PHF1-201ENST00000374512 CBFA2T2O43439 604 aa20.74■□□□□ 0.91
PHF1-201ENST00000374512 SYKP43405 635 aa20.74■□□□□ 0.91
PHF1-201ENST00000374512 METAP2P50579 478 aaKnown RBP eCLIP20.74■□□□□ 0.914e-6■■□□□ 13.2
PHF1-201ENST00000374512 TMC6Q7Z403 805 aa20.74■□□□□ 0.91
PHF1-201ENST00000374512 ELOA2Q8IYF1 753 aaPredicted RBP20.74■□□□□ 0.91
PHF1-201ENST00000374512 CNNM1Q9NRU3 951 aa20.74■□□□□ 0.91
PHF1-201ENST00000374512 TRMT1Q9NXH9 659 aaKnown RBP20.74■□□□□ 0.91
PHF1-201ENST00000374512 ZNF215Q9UL58 517 aaPredicted RBP20.74■□□□□ 0.91
PHF1-201ENST00000374512 MCAMP43121 646 aa20.73■□□□□ 0.91
PHF1-201ENST00000374512 E4F1Q66K89 784 aaPredicted RBP20.73■□□□□ 0.91
PHF1-201ENST00000374512 PI16Q6UXB8 463 aa20.73■□□□□ 0.91
PHF1-201ENST00000374512 ALG1Q9BT22 464 aa20.73■□□□□ 0.91
PHF1-201ENST00000374512 L2HGDHQ9H9P8 463 aa20.73■□□□□ 0.91
PHF1-201ENST00000374512 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.73■□□□□ 0.91
PHF1-201ENST00000374512 SH2B2O14492 632 aaPredicted RBP20.73■□□□□ 0.91
PHF1-201ENST00000374512 CYP19A1P11511 503 aaPredicted RBP20.73■□□□□ 0.91
PHF1-201ENST00000374512 ARMCX5Q6P1M9 558 aa20.73■□□□□ 0.91
PHF1-201ENST00000374512 NUP98P52948 1817 aa20.72■□□□□ 0.91
PHF1-201ENST00000374512 IRS4O14654 1257 aaPredicted RBP20.72■□□□□ 0.91
PHF1-201ENST00000374512 VPS37DQ86XT2 251 aa20.72■□□□□ 0.91
PHF1-201ENST00000374512 FBXW7Q969H0 707 aa20.72■□□□□ 0.91
PHF1-201ENST00000374512 WDHD1O75717 1129 aaPredicted RBP20.72■□□□□ 0.91
PHF1-201ENST00000374512 FANCCQ00597 558 aa20.72■□□□□ 0.91
PHF1-201ENST00000374512 GABPB1Q06547 395 aaPredicted RBP20.72■□□□□ 0.91
PHF1-201ENST00000374512 PPP1R13BQ96KQ4 1090 aa20.72■□□□□ 0.91
PHF1-201ENST00000374512 SLC4A9Q96Q91 983 aa20.72■□□□□ 0.91
PHF1-201ENST00000374512 ALX1Q15699 326 aa20.71■□□□□ 0.91
PHF1-201ENST00000374512 KRT40Q6A162 431 aa20.71■□□□□ 0.91
PHF1-201ENST00000374512 SGMS1Q86VZ5 419 aa20.71■□□□□ 0.91
PHF1-201ENST00000374512 VGLL2Q8N8G2 317 aa20.71■□□□□ 0.91
PHF1-201ENST00000374512 NBPF3Q9H094 633 aa20.71■□□□□ 0.91
PHF1-201ENST00000374512 TRMT112Q9UI30 125 aaKnown RBP20.71■□□□□ 0.91
PHF1-201ENST00000374512 CUTAO60888 179 aa20.7■□□□□ 0.9
PHF1-201ENST00000374512 MYL5Q02045 173 aa20.7■□□□□ 0.9
PHF1-201ENST00000374512 PTPAQ15257 358 aa20.7■□□□□ 0.9
PHF1-201ENST00000374512 SLC9C2Q5TAH2 1124 aa20.7■□□□□ 0.9
PHF1-201ENST00000374512 RESP18Q5W5W9 173 aa20.7■□□□□ 0.9
PHF1-201ENST00000374512 APOA5Q6Q788 366 aa20.7■□□□□ 0.9
PHF1-201ENST00000374512 MROH7-TTC4A0A0A0MT08 1334 aa20.7■□□□□ 0.9
PHF1-201ENST00000374512 STK36Q9NRP7 1315 aa20.7■□□□□ 0.9
PHF1-201ENST00000374512 BIN1O00499 593 aa20.7■□□□□ 0.9
PHF1-201ENST00000374512 PDE8AO60658 829 aa20.7■□□□□ 0.9
PHF1-201ENST00000374512 PDE8BO95263 885 aa20.7■□□□□ 0.9
PHF1-201ENST00000374512 TRIM29Q14134 588 aa20.7■□□□□ 0.9
PHF1-201ENST00000374512 CDCA7Q9BWT1 371 aaPredicted RBP20.7■□□□□ 0.9
PHF1-201ENST00000374512 ZBTB1Q9Y2K1 713 aa20.7■□□□□ 0.9
PHF1-201ENST00000374512 GNL2Q13823 731 aaKnown RBP20.69■□□□□ 0.9
PHF1-201ENST00000374512 NAA30Q147X3 362 aaPredicted RBP20.69■□□□□ 0.9
PHF1-201ENST00000374512 MAP3K14Q99558 947 aa20.69■□□□□ 0.9
PHF1-201ENST00000374512 TBC1D2BQ9UPU7 963 aa20.69■□□□□ 0.9
PHF1-201ENST00000374512 ERVV-1B6SEH8 477 aa20.69■□□□□ 0.9
PHF1-201ENST00000374512 UQCRFS1P1P0C7P4 283 aa20.69■□□□□ 0.9
PHF1-201ENST00000374512 LIFRP42702 1097 aa20.69■□□□□ 0.9
PHF1-201ENST00000374512 SYTL4Q96C24 671 aaPredicted RBP20.69■□□□□ 0.9
PHF1-201ENST00000374512 GJB4Q9NTQ9 266 aa20.69■□□□□ 0.9
PHF1-201ENST00000374512 DOT1LQ8TEK3 1739 aa20.68■□□□□ 0.9
PHF1-201ENST00000374512 ZBTB43O43298 467 aa20.68■□□□□ 0.9
PHF1-201ENST00000374512 MARCKSP29966 332 aaPredicted RBP20.68■□□□□ 0.9
PHF1-201ENST00000374512 IARSP41252 1262 aaKnown RBP20.68■□□□□ 0.9
PHF1-201ENST00000374512 SHC4Q6S5L8 630 aa20.68■□□□□ 0.9
PHF1-201ENST00000374512 OLFM4Q6UX06 510 aa20.68■□□□□ 0.9
PHF1-201ENST00000374512 CYB5R4Q7L1T6 521 aa20.68■□□□□ 0.9
PHF1-201ENST00000374512 FCHSD1Q86WN1 690 aa20.68■□□□□ 0.9
PHF1-201ENST00000374512 TBC1D10CQ8IV04 446 aa20.68■□□□□ 0.9
PHF1-201ENST00000374512 WASF1Q92558 559 aa20.68■□□□□ 0.9
PHF1-201ENST00000374512 HOOK1Q9UJC3 728 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms