RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 NFAT5O94916 1531 aa11.53□□□□□ -0.56
KDM4A-201ENST00000372396 ZBTB43O43298 467 aa11.53□□□□□ -0.56
KDM4A-201ENST00000372396 ATP2B1P20020 1258 aa11.53□□□□□ -0.56
KDM4A-201ENST00000372396 RBM5P52756 815 aaKnown RBP eCLIP11.53□□□□□ -0.56
KDM4A-201ENST00000372396 WTAPQ15007 396 aa11.53□□□□□ -0.56
KDM4A-201ENST00000372396 PDIA6Q15084 440 aa11.53□□□□□ -0.56
KDM4A-201ENST00000372396 MAP3K11Q16584 847 aa11.53□□□□□ -0.56
KDM4A-201ENST00000372396 RABL6Q3YEC7 729 aaPredicted RBP11.53□□□□□ -0.56
KDM4A-201ENST00000372396 SPATA31A1Q5TZJ5 1347 aa11.53□□□□□ -0.56
KDM4A-201ENST00000372396 TXLNAP40222 546 aa11.53□□□□□ -0.56
KDM4A-201ENST00000372396 CLEC4GQ6UXB4 293 aa11.53□□□□□ -0.56
KDM4A-201ENST00000372396 EDC3Q96F86 508 aaKnown RBP11.53□□□□□ -0.56
KDM4A-201ENST00000372396 PUS3Q9BZE2 481 aaKnown RBP11.53□□□□□ -0.56
KDM4A-201ENST00000372396 KDM6AO15550 1401 aaPredicted RBP11.53□□□□□ -0.56
KDM4A-201ENST00000372396 MBD4O95243 580 aa11.53□□□□□ -0.56
KDM4A-201ENST00000372396 HIBADHP31937 336 aaKnown RBP11.53□□□□□ -0.56
KDM4A-201ENST00000372396 PTH1RQ03431 593 aa11.53□□□□□ -0.56
KDM4A-201ENST00000372396 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.53□□□□□ -0.56
KDM4A-201ENST00000372396 MAP4K1Q92918 833 aa11.53□□□□□ -0.56
KDM4A-201ENST00000372396 SOGA3Q5TF21 947 aa11.52□□□□□ -0.56
KDM4A-201ENST00000372396 LLPHQ9BRT6 129 aaKnown RBP11.52□□□□□ -0.56
KDM4A-201ENST00000372396 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.52□□□□□ -0.56
KDM4A-201ENST00000372396 PALD1Q9ULE6 856 aa11.52□□□□□ -0.56
KDM4A-201ENST00000372396 NDUFB9Q9Y6M9 179 aa11.52□□□□□ -0.56
KDM4A-201ENST00000372396 V9GYY5 206 aaPredicted RBP11.52□□□□□ -0.56
KDM4A-201ENST00000372396 NALCNQ8IZF0 1738 aa11.52□□□□□ -0.56
KDM4A-201ENST00000372396 RGS12O14924 1447 aa11.52□□□□□ -0.56
KDM4A-201ENST00000372396 TAF5LO75529 589 aa11.52□□□□□ -0.56
KDM4A-201ENST00000372396 RPS8P62241 208 aaKnown RBP11.52□□□□□ -0.56
KDM4A-201ENST00000372396 MICU3Q86XE3 530 aa11.52□□□□□ -0.56
KDM4A-201ENST00000372396 DDX19AQ9NUU7 478 aaKnown RBP11.52□□□□□ -0.56
KDM4A-201ENST00000372396 TMOD2Q9NZR1 351 aa11.52□□□□□ -0.56
KDM4A-201ENST00000372396 PARP3Q9Y6F1 533 aa11.52□□□□□ -0.56
KDM4A-201ENST00000372396 COL5A2P05997 1499 aaPredicted RBP11.52□□□□□ -0.57
KDM4A-201ENST00000372396 USP42Q9H9J4 1324 aaKnown RBP11.52□□□□□ -0.57
KDM4A-201ENST00000372396 KIF2AO00139 706 aaPredicted RBP11.52□□□□□ -0.57
KDM4A-201ENST00000372396 CPA1P15085 419 aa11.52□□□□□ -0.57
KDM4A-201ENST00000372396 CYP2C19P33261 490 aa11.52□□□□□ -0.57
KDM4A-201ENST00000372396 BARGINQ6ZT62 677 aa11.52□□□□□ -0.57
KDM4A-201ENST00000372396 ZSWIM6Q9HCJ5 1215 aa11.52□□□□□ -0.57
KDM4A-201ENST00000372396 RRP15Q9Y3B9 282 aaKnown RBP11.52□□□□□ -0.57
KDM4A-201ENST00000372396 CTDP1Q9Y5B0 961 aaPredicted RBP11.52□□□□□ -0.57
KDM4A-201ENST00000372396 KIF5BP33176 963 aa11.52□□□□□ -0.57
KDM4A-201ENST00000372396 PLCG2P16885 1265 aa11.51□□□□□ -0.57
KDM4A-201ENST00000372396 GYS2P54840 703 aa11.51□□□□□ -0.57
KDM4A-201ENST00000372396 CCDC102BQ68D86 513 aa11.51□□□□□ -0.57
KDM4A-201ENST00000372396 RFX7Q2KHR2 1363 aa11.51□□□□□ -0.57
KDM4A-201ENST00000372396 CTAGE5O15320 804 aa11.51□□□□□ -0.57
KDM4A-201ENST00000372396 CEP135Q66GS9 1140 aa11.51□□□□□ -0.57
KDM4A-201ENST00000372396 FAM196AQ6ZSG2 479 aa11.51□□□□□ -0.57
KDM4A-201ENST00000372396 TTLL11Q8NHH1 800 aa11.51□□□□□ -0.57
KDM4A-201ENST00000372396 SPATA31A6Q5VVP1 1343 aa11.51□□□□□ -0.57
KDM4A-201ENST00000372396 TSPY2A6NKD2 308 aa11.51□□□□□ -0.57
KDM4A-201ENST00000372396 SYT1P21579 422 aa11.51□□□□□ -0.57
KDM4A-201ENST00000372396 GUCY1B3Q02153 619 aa11.51□□□□□ -0.57
KDM4A-201ENST00000372396 APOBRQ0VD83 1088 aa11.51□□□□□ -0.57
KDM4A-201ENST00000372396 VPS72Q15906 364 aa11.51□□□□□ -0.57
KDM4A-201ENST00000372396 ZMYM1Q5SVZ6 1142 aa11.51□□□□□ -0.57
KDM4A-201ENST00000372396 FAM212AQ96EL1 285 aa11.51□□□□□ -0.57
KDM4A-201ENST00000372396 TMEM87BQ96K49 555 aa11.51□□□□□ -0.57
KDM4A-201ENST00000372396 QTRT2Q9H974 415 aaKnown RBP11.51□□□□□ -0.57
KDM4A-201ENST00000372396 NSFL1CQ9UNZ2 370 aaKnown RBP11.51□□□□□ -0.57
KDM4A-201ENST00000372396 HLFQ16534 295 aa11.5□□□□□ -0.57
KDM4A-201ENST00000372396 USPL1Q5W0Q7 1092 aa11.5□□□□□ -0.57
KDM4A-201ENST00000372396 PEAK1Q9H792 1746 aa11.5□□□□□ -0.57
KDM4A-201ENST00000372396 LDHBP07195 334 aaKnown RBP11.5□□□□□ -0.57
KDM4A-201ENST00000372396 PTPN14Q15678 1187 aa11.5□□□□□ -0.57
KDM4A-201ENST00000372396 GDPD2Q9HCC8 539 aa11.5□□□□□ -0.57
KDM4A-201ENST00000372396 ZNF532Q9HCE3 1301 aa11.5□□□□□ -0.57
KDM4A-201ENST00000372396 RTL9Q8NET4 1388 aa11.5□□□□□ -0.57
KDM4A-201ENST00000372396 UBE4AQ14139 1066 aa11.5□□□□□ -0.57
KDM4A-201ENST00000372396 FILIP1Q7Z7B0 1213 aa11.5□□□□□ -0.57
KDM4A-201ENST00000372396 ZSCAN29Q8IWY8 852 aaPredicted RBP11.5□□□□□ -0.57
KDM4A-201ENST00000372396 MIGA1Q8NAN2 632 aa11.5□□□□□ -0.57
KDM4A-201ENST00000372396 CALR3Q96L12 384 aaKnown RBP11.5□□□□□ -0.57
KDM4A-201ENST00000372396 PLA2G12BQ9BX93 195 aa11.5□□□□□ -0.57
KDM4A-201ENST00000372396 NWD1Q149M9 1564 aa11.5□□□□□ -0.57
KDM4A-201ENST00000372396 IKQ13123 557 aaPredicted RBP11.5□□□□□ -0.57
KDM4A-201ENST00000372396 UBE3CQ15386 1083 aa11.5□□□□□ -0.57
KDM4A-201ENST00000372396 RTN1Q16799 776 aa11.5□□□□□ -0.57
KDM4A-201ENST00000372396 WDR66Q8TBY9 1149 aa11.5□□□□□ -0.57
KDM4A-201ENST00000372396 LMBRD1Q9NUN5 540 aa11.5□□□□□ -0.57
KDM4A-201ENST00000372396 TRIM66O15016 1216 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 FOXO4P98177 505 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 ATP2B2Q01814 1243 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 MCTP2Q6DN12 878 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 SPATA31A5Q5VU36 1347 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 SPATA31A7Q8IWB4 1347 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 PTPDC1A2A3K4 754 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 CALM1P0DP23 149 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 CALM2P0DP24 149 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 CALM3P0DP25 149 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 NOP2P46087 812 aaKnown RBP11.49□□□□□ -0.57
KDM4A-201ENST00000372396 FLAD1Q8NFF5 587 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 EYA3Q99504 573 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 KAT14Q9H8E8 782 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 RPS6KA4O75676 772 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 ADORA1P30542 326 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 CHRNDQ07001 517 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 USP48Q86UV5 1035 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms