RNA–Protein interactions for RNA: ENST00000371725.7

SDCCAG3-204, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SDCCAG3, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-204ENST00000371725 LEMD3Q9Y2U8 911 aa33.25■■■□□ 2.91
SDCCAG3-204ENST00000371725 LAMA4Q16363 1823 aa33.25■■■□□ 2.91
SDCCAG3-204ENST00000371725 BBOX1O75936 387 aa33.25■■■□□ 2.91
SDCCAG3-204ENST00000371725 ADGRA1Q86SQ6 560 aa33.25■■■□□ 2.91
SDCCAG3-204ENST00000371725 UFL1O94874 794 aa33.24■■■□□ 2.91
SDCCAG3-204ENST00000371725 FGAP02671 866 aa33.24■■■□□ 2.91
SDCCAG3-204ENST00000371725 HAND2P61296 217 aa33.24■■■□□ 2.91
SDCCAG3-204ENST00000371725 CACNA1SQ13698 1873 aa33.24■■■□□ 2.91
SDCCAG3-204ENST00000371725 NOLC1Q14978 699 aaKnown RBP eCLIP33.23■■■□□ 2.91
SDCCAG3-204ENST00000371725 RAI14Q9P0K7 980 aa33.23■■■□□ 2.91
SDCCAG3-204ENST00000371725 PPEF1O14829 653 aaPredicted RBP33.23■■■□□ 2.91
SDCCAG3-204ENST00000371725 CCDC192P0DO97 292 aa33.23■■■□□ 2.91
SDCCAG3-204ENST00000371725 MIGA1Q8NAN2 632 aa33.23■■■□□ 2.91
SDCCAG3-204ENST00000371725 ARMT1Q9H993 441 aa33.23■■■□□ 2.91
SDCCAG3-204ENST00000371725 MBD4O95243 580 aa33.22■■■□□ 2.91
SDCCAG3-204ENST00000371725 MTERF4Q7Z6M4 381 aaKnown RBP33.22■■■□□ 2.91
SDCCAG3-204ENST00000371725 TTC6Q86TZ1 520 aa33.22■■■□□ 2.91
SDCCAG3-204ENST00000371725 SPTLC3Q9NUV7 552 aa33.22■■■□□ 2.91
SDCCAG3-204ENST00000371725 QSER1Q2KHR3 1735 aa33.22■■■□□ 2.91
SDCCAG3-204ENST00000371725 ZNF384Q8TF68 577 aa33.22■■■□□ 2.91
SDCCAG3-204ENST00000371725 AIDAQ96BJ3 306 aa33.22■■■□□ 2.91
SDCCAG3-204ENST00000371725 POLLQ9UGP5 575 aa33.22■■■□□ 2.91
SDCCAG3-204ENST00000371725 TPM3P06753 285 aa33.21■■■□□ 2.91
SDCCAG3-204ENST00000371725 RBM10P98175 930 aaKnown RBP33.21■■■□□ 2.91
SDCCAG3-204ENST00000371725 TOB2Q14106 344 aaPredicted RBP33.21■■■□□ 2.91
SDCCAG3-204ENST00000371725 STRBPQ96SI9 672 aaKnown RBP33.21■■■□□ 2.91
SDCCAG3-204ENST00000371725 DTNBO60941 627 aa33.2■■■□□ 2.91
SDCCAG3-204ENST00000371725 TPRNQ4KMQ1 711 aa33.2■■■□□ 2.91
SDCCAG3-204ENST00000371725 CDC37L1Q7L3B6 337 aa33.2■■■□□ 2.91
SDCCAG3-204ENST00000371725 NEK1Q96PY6 1258 aa33.2■■■□□ 2.91
SDCCAG3-204ENST00000371725 LRRC37AA6NMS7 1700 aa33.2■■■□□ 2.91
SDCCAG3-204ENST00000371725 PDE6BP35913 854 aa33.2■■■□□ 2.9
SDCCAG3-204ENST00000371725 PRIMPOLQ96LW4 560 aa33.2■■■□□ 2.9
SDCCAG3-204ENST00000371725 ZNF830Q96NB3 372 aaPredicted RBP33.2■■■□□ 2.9
SDCCAG3-204ENST00000371725 NPR1P16066 1061 aa33.19■■■□□ 2.9
SDCCAG3-204ENST00000371725 CYP7A1P22680 504 aa33.19■■■□□ 2.9
SDCCAG3-204ENST00000371725 LCORLQ8N3X6 602 aa33.19■■■□□ 2.9
SDCCAG3-204ENST00000371725 SCAND2PQ9GZW5 306 aaPredicted RBP33.19■■■□□ 2.9
SDCCAG3-204ENST00000371725 GGA1Q9UJY5 639 aa33.19■■■□□ 2.9
SDCCAG3-204ENST00000371725 KRT32Q14532 448 aa33.19■■■□□ 2.9
SDCCAG3-204ENST00000371725 TTC12Q9H892 705 aaPredicted RBP33.19■■■□□ 2.9
SDCCAG3-204ENST00000371725 FAM13BQ9NYF5 915 aa33.19■■■□□ 2.9
SDCCAG3-204ENST00000371725 PRKAB2O43741 272 aa33.18■■■□□ 2.9
SDCCAG3-204ENST00000371725 APPP05067 770 aa33.18■■■□□ 2.9
SDCCAG3-204ENST00000371725 MYRIPQ8NFW9 859 aa33.18■■■□□ 2.9
SDCCAG3-204ENST00000371725 LTBP1Q14766 1721 aa33.18■■■□□ 2.9
SDCCAG3-204ENST00000371725 E7EWF7 191 aa33.17■■■□□ 2.9
SDCCAG3-204ENST00000371725 SEMA3EO15041 775 aa33.17■■■□□ 2.9
SDCCAG3-204ENST00000371725 TBC1D16Q8TBP0 767 aa33.17■■■□□ 2.9
SDCCAG3-204ENST00000371725 LRRC2Q9BYS8 371 aa33.17■■■□□ 2.9
SDCCAG3-204ENST00000371725 PRDX5P30044 214 aa33.17■■■□□ 2.9
SDCCAG3-204ENST00000371725 ZNF622Q969S3 477 aaKnown RBP eCLIP33.17■■■□□ 2.9
SDCCAG3-204ENST00000371725 AP5Z1O43299 807 aa33.16■■■□□ 2.9
SDCCAG3-204ENST00000371725 ATP2B4P23634 1241 aa33.16■■■□□ 2.9
SDCCAG3-204ENST00000371725 CHRNA5P30532 468 aa33.16■■■□□ 2.9
SDCCAG3-204ENST00000371725 MAP3K11Q16584 847 aa33.16■■■□□ 2.9
SDCCAG3-204ENST00000371725 SP8Q8IXZ3 490 aa33.16■■■□□ 2.9
SDCCAG3-204ENST00000371725 ATP6V0A2Q9Y487 856 aa33.16■■■□□ 2.9
SDCCAG3-204ENST00000371725 C6orf229H3BNL8 230 aa33.15■■■□□ 2.9
SDCCAG3-204ENST00000371725 HMGN5P82970 282 aaKnown RBP33.15■■■□□ 2.9
SDCCAG3-204ENST00000371725 C2CD5Q86YS7 1000 aa33.15■■■□□ 2.9
SDCCAG3-204ENST00000371725 NUP62CLQ9H1M0 184 aa33.15■■■□□ 2.9
SDCCAG3-204ENST00000371725 EPB41L4AQ9HCS5 686 aaPredicted RBP33.15■■■□□ 2.9
SDCCAG3-204ENST00000371725 PODXL2Q9NZ53 605 aa33.15■■■□□ 2.9
SDCCAG3-204ENST00000371725 MASTLQ96GX5 879 aa33.14■■■□□ 2.9
SDCCAG3-204ENST00000371725 TDRD7Q8NHU6 1098 aaKnown RBP33.14■■■□□ 2.9
SDCCAG3-204ENST00000371725 FAM200AQ8TCP9 573 aa33.14■■■□□ 2.9
SDCCAG3-204ENST00000371725 CHST3Q7LGC8 479 aa33.13■■■□□ 2.89
SDCCAG3-204ENST00000371725 MPNDQ8N594 471 aa33.13■■■□□ 2.89
SDCCAG3-204ENST00000371725 NBPF3Q9H094 633 aa33.13■■■□□ 2.89
SDCCAG3-204ENST00000371725 CTNNA3Q9UI47 895 aa33.13■■■□□ 2.89
SDCCAG3-204ENST00000371725 MECOMQ03112 1051 aa33.13■■■□□ 2.89
SDCCAG3-204ENST00000371725 IMMTQ16891 758 aaKnown RBP33.13■■■□□ 2.89
SDCCAG3-204ENST00000371725 DNTTIP2Q5QJE6 756 aaKnown RBP33.13■■■□□ 2.89
SDCCAG3-204ENST00000371725 ZNF804AQ7Z570 1209 aa33.13■■■□□ 2.89
SDCCAG3-204ENST00000371725 FERMT3Q86UX7 667 aa33.13■■■□□ 2.89
SDCCAG3-204ENST00000371725 LIG1P18858 919 aa33.12■■■□□ 2.89
SDCCAG3-204ENST00000371725 DYNLL1P63167 89 aaKnown RBP33.12■■■□□ 2.89
SDCCAG3-204ENST00000371725 GRIK5Q16478 980 aa33.12■■■□□ 2.89
SDCCAG3-204ENST00000371725 NSUN4Q96CB9 384 aaKnown RBP33.12■■■□□ 2.89
SDCCAG3-204ENST00000371725 NAA16Q6N069 864 aaPredicted RBP33.11■■■□□ 2.89
SDCCAG3-204ENST00000371725 RBM43Q6ZSC3 357 aaKnown RBP33.11■■■□□ 2.89
SDCCAG3-204ENST00000371725 C15orf52Q6ZUT6 534 aaKnown RBP33.11■■■□□ 2.89
SDCCAG3-204ENST00000371725 PDS5AQ29RF7 1337 aaKnown RBP33.11■■■□□ 2.89
SDCCAG3-204ENST00000371725 GSG1L2A8MUP6 293 aa33.11■■■□□ 2.89
SDCCAG3-204ENST00000371725 CD209Q9NNX6 404 aa33.11■■■□□ 2.89
SDCCAG3-204ENST00000371725 RIMBP2O15034 1052 aa33.1■■■□□ 2.89
SDCCAG3-204ENST00000371725 ALDH1B1P30837 517 aa33.1■■■□□ 2.89
SDCCAG3-204ENST00000371725 GTF2F1P35269 517 aaKnown RBP eCLIP33.1■■■□□ 2.893e-7■□□□□ 9.7
SDCCAG3-204ENST00000371725 Q6ZUG5 572 aa33.1■■■□□ 2.89
SDCCAG3-204ENST00000371725 NKX2-3Q8TAU0 364 aa33.1■■■□□ 2.89
SDCCAG3-204ENST00000371725 DDX19AQ9NUU7 478 aaKnown RBP33.1■■■□□ 2.89
SDCCAG3-204ENST00000371725 MRVI1Q9Y6F6 885 aa33.1■■■□□ 2.89
SDCCAG3-204ENST00000371725 SLC4A4Q9Y6R1 1079 aa33.1■■■□□ 2.89
SDCCAG3-204ENST00000371725 DUOX1Q9NRD9 1551 aa33.1■■■□□ 2.89
SDCCAG3-204ENST00000371725 GOLGA6L6A8MZA4 724 aa33.1■■■□□ 2.89
SDCCAG3-204ENST00000371725 TYRO3Q06418 890 aa33.1■■■□□ 2.89
SDCCAG3-204ENST00000371725 IFNL3Q8IZI9 196 aa33.1■■■□□ 2.89
SDCCAG3-204ENST00000371725 KIAA1524Q8TCG1 905 aa33.1■■■□□ 2.89
SDCCAG3-204ENST00000371725 SPATA32Q96LK8 384 aa33.1■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms