RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 CDCA5Q96FF9 252 aa18.03■□□□□ 0.48
COL9A1-204ENST00000370496 TCP10L2B9ZVM9 353 aa18.02■□□□□ 0.47
COL9A1-204ENST00000370496 IGSF3O75054 1194 aa18.02■□□□□ 0.47
COL9A1-204ENST00000370496 TNNI2P48788 182 aa18.02■□□□□ 0.47
COL9A1-204ENST00000370496 CACNB3P54284 484 aa18.02■□□□□ 0.47
COL9A1-204ENST00000370496 DLK2Q6UY11 383 aa18.02■□□□□ 0.47
COL9A1-204ENST00000370496 ZNF384Q8TF68 577 aa18.02■□□□□ 0.47
COL9A1-204ENST00000370496 PPP2R3BQ9Y5P8 575 aa18.02■□□□□ 0.47
COL9A1-204ENST00000370496 PAPPA2Q9BXP8 1791 aa18.01■□□□□ 0.47
COL9A1-204ENST00000370496 TMEM88BA6NKF7 163 aa18.01■□□□□ 0.47
COL9A1-204ENST00000370496 GLRX3O76003 335 aaKnown RBP18.01■□□□□ 0.47
COL9A1-204ENST00000370496 MAGEB6Q8N7X4 407 aa18.01■□□□□ 0.47
COL9A1-204ENST00000370496 EDC3Q96F86 508 aaKnown RBP18.01■□□□□ 0.47
COL9A1-204ENST00000370496 DEFB129Q9H1M3 183 aa18.01■□□□□ 0.47
COL9A1-204ENST00000370496 CYP7A1P22680 504 aa18■□□□□ 0.47
COL9A1-204ENST00000370496 NF2P35240 595 aa18■□□□□ 0.47
COL9A1-204ENST00000370496 CDC42EP5Q6NZY7 148 aa18■□□□□ 0.47
COL9A1-204ENST00000370496 FAM163AQ96GL9 167 aaPredicted RBP18■□□□□ 0.47
COL9A1-204ENST00000370496 DDX24Q9GZR7 859 aaKnown RBP eCLIP18■□□□□ 0.47
COL9A1-204ENST00000370496 CREBZFQ9NS37 354 aa18■□□□□ 0.47
COL9A1-204ENST00000370496 USP40Q9NVE5 1235 aa18■□□□□ 0.47
COL9A1-204ENST00000370496 ABT1Q9ULW3 272 aaKnown RBP18■□□□□ 0.47
COL9A1-204ENST00000370496 SALL3Q9BXA9 1300 aa18■□□□□ 0.47
COL9A1-204ENST00000370496 CDK5RAP2Q96SN8 1893 aa18■□□□□ 0.47
COL9A1-204ENST00000370496 FOCADQ5VW36 1801 aa17.99■□□□□ 0.47
COL9A1-204ENST00000370496 RASA3Q14644 834 aa17.99■□□□□ 0.47
COL9A1-204ENST00000370496 PI4K2BQ8TCG2 481 aa17.99■□□□□ 0.47
COL9A1-204ENST00000370496 GPR75-ASB3A0A0A6YYF3 556 aa17.98■□□□□ 0.47
COL9A1-204ENST00000370496 BAG3O95817 575 aa17.98■□□□□ 0.47
COL9A1-204ENST00000370496 PDE6AP16499 860 aa17.98■□□□□ 0.47
COL9A1-204ENST00000370496 PRAMEF18Q5VWM3 479 aa17.98■□□□□ 0.47
COL9A1-204ENST00000370496 TMED8Q6PL24 325 aaPredicted RBP17.98■□□□□ 0.47
COL9A1-204ENST00000370496 AATFQ9NY61 560 aaKnown RBP eCLIP17.98■□□□□ 0.47
COL9A1-204ENST00000370496 RFX7Q2KHR2 1363 aa17.98■□□□□ 0.47
COL9A1-204ENST00000370496 AK9Q5TCS8 1911 aa17.98■□□□□ 0.47
COL9A1-204ENST00000370496 SSC5DA1L4H1 1573 aa17.97■□□□□ 0.47
COL9A1-204ENST00000370496 MAP4K4O95819 1239 aaPredicted RBP17.97■□□□□ 0.47
COL9A1-204ENST00000370496 PDE1AP54750 535 aa17.97■□□□□ 0.47
COL9A1-204ENST00000370496 CNTNAP1P78357 1384 aa17.97■□□□□ 0.47
COL9A1-204ENST00000370496 HTRA3P83110 453 aa17.97■□□□□ 0.47
COL9A1-204ENST00000370496 SLC9C2Q5TAH2 1124 aa17.97■□□□□ 0.47
COL9A1-204ENST00000370496 FKBP1CQ5VVH2 108 aa17.97■□□□□ 0.47
COL9A1-204ENST00000370496 ADGRA1Q86SQ6 560 aa17.97■□□□□ 0.47
COL9A1-204ENST00000370496 RPAP1Q9BWH6 1393 aaPredicted RBP17.97■□□□□ 0.47
COL9A1-204ENST00000370496 TMEM39BQ9GZU3 492 aa17.97■□□□□ 0.47
COL9A1-204ENST00000370496 GBA2Q9HCG7 927 aaPredicted RBP17.97■□□□□ 0.47
COL9A1-204ENST00000370496 PLCG2P16885 1265 aa17.96■□□□□ 0.47
COL9A1-204ENST00000370496 TCP10Q12799 353 aa17.96■□□□□ 0.47
COL9A1-204ENST00000370496 NFIAQ12857 509 aa17.96■□□□□ 0.47
COL9A1-204ENST00000370496 PICALMQ13492 652 aa17.96■□□□□ 0.47
COL9A1-204ENST00000370496 TTLL12Q14166 644 aaPredicted RBP17.96■□□□□ 0.47
COL9A1-204ENST00000370496 CST9Q5W186 159 aa17.96■□□□□ 0.47
COL9A1-204ENST00000370496 ZSCAN25Q6NSZ9 544 aa17.96■□□□□ 0.47
COL9A1-204ENST00000370496 FAM83AQ86UY5 434 aa17.96■□□□□ 0.47
COL9A1-204ENST00000370496 TEX11Q8IYF3 940 aa17.96■□□□□ 0.47
COL9A1-204ENST00000370496 MIGA1Q8NAN2 632 aa17.96■□□□□ 0.47
COL9A1-204ENST00000370496 STAP2Q9UGK3 403 aa17.96■□□□□ 0.47
COL9A1-204ENST00000370496 NAV1Q8NEY1 1877 aa17.96■□□□□ 0.47
COL9A1-204ENST00000370496 ZNF532Q9HCE3 1301 aa17.95■□□□□ 0.46
COL9A1-204ENST00000370496 OTOFQ9HC10 1997 aa17.95■□□□□ 0.46
COL9A1-204ENST00000370496 CENPQQ7L2Z9 268 aaPredicted RBP17.95■□□□□ 0.46
COL9A1-204ENST00000370496 C2orf69Q8N8R5 385 aa17.95■□□□□ 0.46
COL9A1-204ENST00000370496 CCDC136Q96JN2 1154 aa17.95■□□□□ 0.46
COL9A1-204ENST00000370496 RGS3P49796 1198 aa17.94■□□□□ 0.46
COL9A1-204ENST00000370496 RHBDL3P58872 404 aa17.94■□□□□ 0.46
COL9A1-204ENST00000370496 SUPT20HL1Q3ZLR7 823 aa17.94■□□□□ 0.46
COL9A1-204ENST00000370496 PAXIP1Q6ZW49 1069 aaPredicted RBP17.94■□□□□ 0.46
COL9A1-204ENST00000370496 CERS3Q8IU89 383 aa17.94■□□□□ 0.46
COL9A1-204ENST00000370496 KBTBD3Q8NAB2 608 aa17.94■□□□□ 0.46
COL9A1-204ENST00000370496 SH3RF3Q8TEJ3 882 aaPredicted RBP17.94■□□□□ 0.46
COL9A1-204ENST00000370496 FSD1Q9BTV5 496 aa17.94■□□□□ 0.46
COL9A1-204ENST00000370496 WDHD1O75717 1129 aaPredicted RBP17.93■□□□□ 0.46
COL9A1-204ENST00000370496 ADD2P35612 726 aa17.93■□□□□ 0.46
COL9A1-204ENST00000370496 FKBP1BP68106 108 aa17.93■□□□□ 0.46
COL9A1-204ENST00000370496 PRKG1Q13976 671 aa17.93■□□□□ 0.46
COL9A1-204ENST00000370496 LRRFIP1Q32MZ4 808 aaKnown RBP17.93■□□□□ 0.46
COL9A1-204ENST00000370496 NBPF12Q5TAG4 269 aaPredicted RBP17.93■□□□□ 0.46
COL9A1-204ENST00000370496 CDAN1Q8IWY9 1227 aa17.93■□□□□ 0.46
COL9A1-204ENST00000370496 FAM151AQ8WW52 585 aa17.93■□□□□ 0.46
COL9A1-204ENST00000370496 IDI2Q9BXS1 227 aa17.93■□□□□ 0.46
COL9A1-204ENST00000370496 FAM198AQ9UFP1 575 aa17.93■□□□□ 0.46
COL9A1-204ENST00000370496 TLL2Q9Y6L7 1015 aa17.93■□□□□ 0.46
COL9A1-204ENST00000370496 MAGEB6P1A0A0J9YX57 407 aa17.92■□□□□ 0.46
COL9A1-204ENST00000370496 ENTPD3O75355 529 aa17.92■□□□□ 0.46
COL9A1-204ENST00000370496 HUNKP57058 714 aa17.92■□□□□ 0.46
COL9A1-204ENST00000370496 DYNLL1P63167 89 aaKnown RBP17.92■□□□□ 0.46
COL9A1-204ENST00000370496 PLEKHM2Q8IWE5 1019 aa17.92■□□□□ 0.46
COL9A1-204ENST00000370496 ZSCAN29Q8IWY8 852 aaPredicted RBP17.92■□□□□ 0.46
COL9A1-204ENST00000370496 HOOK2Q96ED9 719 aa17.92■□□□□ 0.46
COL9A1-204ENST00000370496 DDX60LQ5H9U9 1706 aaKnown RBP17.92■□□□□ 0.46
COL9A1-204ENST00000370496 TCRBV5S4A2TA0A5A2 114 aa17.91■□□□□ 0.46
COL9A1-204ENST00000370496 PPP1R12BO60237 982 aaPredicted RBP17.91■□□□□ 0.46
COL9A1-204ENST00000370496 PPP4CP60510 307 aa17.91■□□□□ 0.46
COL9A1-204ENST00000370496 ARMC9Q7Z3E5 817 aa17.91■□□□□ 0.46
COL9A1-204ENST00000370496 SAPCD2Q86UD0 394 aa17.91■□□□□ 0.46
COL9A1-204ENST00000370496 TEPSINQ96N21 525 aa17.91■□□□□ 0.46
COL9A1-204ENST00000370496 DDX4Q9NQI0 724 aaKnown RBP17.91■□□□□ 0.46
COL9A1-204ENST00000370496 MKRN1Q9UHC7 482 aaKnown RBP17.91■□□□□ 0.46
COL9A1-204ENST00000370496 COL2A1P02458 1487 aaPredicted RBP17.91■□□□□ 0.46
COL9A1-204ENST00000370496 MYH1P12882 1939 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms