RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 PDCP20941 246 aa11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 TM4SF1P30408 202 aa11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 ST5P78524 1137 aa11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 SYAP1Q96A49 352 aaPredicted RBP11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 STRBPQ96SI9 672 aaKnown RBP11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 TRIM34Q9BYJ4 488 aa11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 LRRC2Q9BYS8 371 aa11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 ATP6V1DQ9Y5K8 247 aa11.67□□□□□ -0.54
PRPF38B-203ENST00000370025 ST3GAL1Q11201 340 aa11.66□□□□□ -0.54
PRPF38B-203ENST00000370025 RALYLQ86SE5 291 aaKnown RBP11.66□□□□□ -0.54
PRPF38B-203ENST00000370025 USP48Q86UV5 1035 aa11.66□□□□□ -0.54
PRPF38B-203ENST00000370025 CHMP4CQ96CF2 233 aa11.66□□□□□ -0.54
PRPF38B-203ENST00000370025 FAM84BQ96KN1 310 aaPredicted RBP11.66□□□□□ -0.54
PRPF38B-203ENST00000370025 DOCK2Q92608 1830 aa11.66□□□□□ -0.54
PRPF38B-203ENST00000370025 VPS37CA5D8V6 355 aaPredicted RBP11.66□□□□□ -0.54
PRPF38B-203ENST00000370025 TRDNQ13061 729 aa11.66□□□□□ -0.54
PRPF38B-203ENST00000370025 NCOA7Q8NI08 942 aa11.66□□□□□ -0.54
PRPF38B-203ENST00000370025 ABCF2Q9UG63 623 aa11.66□□□□□ -0.54
PRPF38B-203ENST00000370025 A0A1B0GUL6 1792 aa11.66□□□□□ -0.54
PRPF38B-203ENST00000370025 SEMA3EO15041 775 aa11.66□□□□□ -0.54
PRPF38B-203ENST00000370025 MBD4O95243 580 aa11.66□□□□□ -0.54
PRPF38B-203ENST00000370025 SERPINB2P05120 415 aa11.66□□□□□ -0.54
PRPF38B-203ENST00000370025 LARP1BQ659C4 914 aaKnown RBP11.66□□□□□ -0.54
PRPF38B-203ENST00000370025 PRR5LQ6MZQ0 368 aa11.66□□□□□ -0.54
PRPF38B-203ENST00000370025 PATL2C9JE40 543 aaKnown RBP11.65□□□□□ -0.54
PRPF38B-203ENST00000370025 GNAT2P19087 354 aa11.65□□□□□ -0.54
PRPF38B-203ENST00000370025 GRAPQ13588 217 aa11.65□□□□□ -0.54
PRPF38B-203ENST00000370025 FBXO33Q7Z6M2 555 aa11.65□□□□□ -0.54
PRPF38B-203ENST00000370025 GRAPLQ8TC17 118 aaPredicted RBP11.65□□□□□ -0.54
PRPF38B-203ENST00000370025 RPGRQ92834 1020 aaKnown RBP11.65□□□□□ -0.54
PRPF38B-203ENST00000370025 GTF3C6Q969F1 213 aa11.65□□□□□ -0.54
PRPF38B-203ENST00000370025 RAI14Q9P0K7 980 aa11.65□□□□□ -0.54
PRPF38B-203ENST00000370025 HIBADHP31937 336 aaKnown RBP11.65□□□□□ -0.54
PRPF38B-203ENST00000370025 LRMPQ12912 555 aa11.65□□□□□ -0.54
PRPF38B-203ENST00000370025 ALX1Q15699 326 aa11.65□□□□□ -0.54
PRPF38B-203ENST00000370025 AGXT2Q9BYV1 514 aa11.65□□□□□ -0.54
PRPF38B-203ENST00000370025 NACAP1Q9BZK3 213 aa11.65□□□□□ -0.54
PRPF38B-203ENST00000370025 WTIPA6NIX2 430 aaPredicted RBP11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 PLSCR1O15162 318 aa11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 CYP7A1P22680 504 aa11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 PTGS1P23219 599 aa11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 NAPBQ9H115 298 aa11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 TMX1Q9H3N1 280 aa11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 ARMT1Q9H993 441 aa11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 ANKIB1Q9P2G1 1089 aa11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 PFKFB2O60825 505 aa11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 APBA3O96018 575 aa11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 F13A1P00488 732 aa11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 RXRBP28702 533 aa11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 NCBP1Q09161 790 aaKnown RBP11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 APOBRQ0VD83 1088 aa11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 PROM2Q8N271 834 aa11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 TFCP2L1Q9NZI6 479 aa11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 CHST3Q7LGC8 479 aa11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 IFNL3Q8IZI9 196 aa11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 FBXL16Q8N461 479 aa11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 ZNF274Q96GC6 653 aaPredicted RBP11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 CNPY2Q9Y2B0 182 aa11.64□□□□□ -0.55
PRPF38B-203ENST00000370025 ZMYM6O95789 1325 aa11.63□□□□□ -0.55
PRPF38B-203ENST00000370025 PRC1O43663 620 aa11.63□□□□□ -0.55
PRPF38B-203ENST00000370025 LLPHQ9BRT6 129 aaKnown RBP11.63□□□□□ -0.55
PRPF38B-203ENST00000370025 KCNF1Q9H3M0 494 aa11.63□□□□□ -0.55
PRPF38B-203ENST00000370025 OGFRQ9NZT2 677 aa11.63□□□□□ -0.55
PRPF38B-203ENST00000370025 LEMD3Q9Y2U8 911 aa11.63□□□□□ -0.55
PRPF38B-203ENST00000370025 PNPLA7Q6ZV29 1317 aa11.63□□□□□ -0.55
PRPF38B-203ENST00000370025 TNRC6CQ9HCJ0 1690 aaKnown RBP11.63□□□□□ -0.55
PRPF38B-203ENST00000370025 RBM17Q96I25 401 aaKnown RBP11.63□□□□□ -0.55
PRPF38B-203ENST00000370025 MTMR6Q9Y217 621 aa11.63□□□□□ -0.55
PRPF38B-203ENST00000370025 SLC4A4Q9Y6R1 1079 aa11.63□□□□□ -0.55
PRPF38B-203ENST00000370025 WDR19Q8NEZ3 1342 aa11.63□□□□□ -0.55
PRPF38B-203ENST00000370025 GOLGA6L4A6NEF3 574 aa11.63□□□□□ -0.55
PRPF38B-203ENST00000370025 GTF2F1P35269 517 aaKnown RBP eCLIP11.63□□□□□ -0.553e-13■■■■■ 48.5
PRPF38B-203ENST00000370025 MB21D2Q8IYB1 491 aaPredicted RBP11.63□□□□□ -0.55
PRPF38B-203ENST00000370025 PDS5AQ29RF7 1337 aaKnown RBP11.62□□□□□ -0.55
PRPF38B-203ENST00000370025 SCRN1Q12765 414 aa11.62□□□□□ -0.55
PRPF38B-203ENST00000370025 CAMK4Q16566 473 aa11.62□□□□□ -0.55
PRPF38B-203ENST00000370025 FERMT3Q86UX7 667 aa11.62□□□□□ -0.55
PRPF38B-203ENST00000370025 MAGEB6P1A0A0J9YX57 407 aa11.62□□□□□ -0.55
PRPF38B-203ENST00000370025 AP5Z1O43299 807 aa11.62□□□□□ -0.55
PRPF38B-203ENST00000370025 KDM4AO75164 1064 aa11.62□□□□□ -0.55
PRPF38B-203ENST00000370025 TNNT3P45378 269 aaPredicted RBP11.62□□□□□ -0.55
PRPF38B-203ENST00000370025 TDO2P48775 406 aa11.62□□□□□ -0.55
PRPF38B-203ENST00000370025 LCORLQ8N3X6 602 aa11.62□□□□□ -0.55
PRPF38B-203ENST00000370025 MIGA1Q8NAN2 632 aa11.62□□□□□ -0.55
PRPF38B-203ENST00000370025 FAM184AQ8NB25 1140 aa11.62□□□□□ -0.55
PRPF38B-203ENST00000370025 XDHP47989 1333 aa11.62□□□□□ -0.55
PRPF38B-203ENST00000370025 KLRK1P26718 216 aa11.62□□□□□ -0.55
PRPF38B-203ENST00000370025 NAA16Q6N069 864 aaPredicted RBP11.62□□□□□ -0.55
PRPF38B-203ENST00000370025 TIGD1Q96MW7 591 aa11.62□□□□□ -0.55
PRPF38B-203ENST00000370025 GSG1L2A8MUP6 293 aa11.61□□□□□ -0.55
PRPF38B-203ENST00000370025 PDIA3P30101 505 aaKnown RBP11.61□□□□□ -0.55
PRPF38B-203ENST00000370025 CRY2Q49AN0 593 aa11.61□□□□□ -0.55
PRPF38B-203ENST00000370025 FLAD1Q8NFF5 587 aa11.61□□□□□ -0.55
PRPF38B-203ENST00000370025 KIAA1524Q8TCG1 905 aa11.61□□□□□ -0.55
PRPF38B-203ENST00000370025 SLFN14P0C7P3 912 aa11.61□□□□□ -0.55
PRPF38B-203ENST00000370025 TNNT1P13805 278 aa11.61□□□□□ -0.55
PRPF38B-203ENST00000370025 NLGN1Q8N2Q7 840 aa11.61□□□□□ -0.55
PRPF38B-203ENST00000370025 NRBP1Q9UHY1 535 aa11.61□□□□□ -0.55
PRPF38B-203ENST00000370025 POLRMTO00411 1230 aaKnown RBP11.61□□□□□ -0.55
PRPF38B-203ENST00000370025 EVCP57679 992 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms