RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 JADE2Q9NQC1 790 aa11.89□□□□□ -0.51
PRPF38B-201ENST00000370021 H3BQF6 201 aa11.88□□□□□ -0.51
PRPF38B-201ENST00000370021 IVLP07476 585 aa11.88□□□□□ -0.51
PRPF38B-201ENST00000370021 TXLNAP40222 546 aa11.88□□□□□ -0.51
PRPF38B-201ENST00000370021 PARP3Q9Y6F1 533 aa11.88□□□□□ -0.51
PRPF38B-201ENST00000370021 GOLGA8AA7E2F4 631 aa11.88□□□□□ -0.51
PRPF38B-201ENST00000370021 CTDNEP1O95476 244 aa11.88□□□□□ -0.51
PRPF38B-201ENST00000370021 HSPD1P10809 573 aaKnown RBP11.88□□□□□ -0.51
PRPF38B-201ENST00000370021 VPS37DQ86XT2 251 aa11.88□□□□□ -0.51
PRPF38B-201ENST00000370021 NFATC2IPQ8NCF5 419 aa11.88□□□□□ -0.51
PRPF38B-201ENST00000370021 ACRBPQ8NEB7 543 aa11.88□□□□□ -0.51
PRPF38B-201ENST00000370021 JRKLQ9Y4A0 524 aa11.88□□□□□ -0.51
PRPF38B-201ENST00000370021 ADCY9O60503 1353 aa11.88□□□□□ -0.51
PRPF38B-201ENST00000370021 CRB1P82279 1406 aa11.88□□□□□ -0.51
PRPF38B-201ENST00000370021 AKR1B15C9JRZ8 316 aaPredicted RBP11.88□□□□□ -0.51
PRPF38B-201ENST00000370021 ENOX2Q16206 610 aaKnown RBP11.88□□□□□ -0.51
PRPF38B-201ENST00000370021 SPECC1LQ69YQ0 1117 aa11.88□□□□□ -0.51
PRPF38B-201ENST00000370021 NCAPH2Q6IBW4 605 aa11.88□□□□□ -0.51
PRPF38B-201ENST00000370021 ANKRD20A12PQ8NF67 263 aa11.88□□□□□ -0.51
PRPF38B-201ENST00000370021 C3P01024 1663 aa11.88□□□□□ -0.51
PRPF38B-201ENST00000370021 A0A0U1RQJ8 604 aa11.87□□□□□ -0.51
PRPF38B-201ENST00000370021 GSPT2Q8IYD1 628 aaKnown RBP11.87□□□□□ -0.51
PRPF38B-201ENST00000370021 SLC35F6Q8N357 371 aa11.87□□□□□ -0.51
PRPF38B-201ENST00000370021 CCDC148Q8NFR7 591 aa11.87□□□□□ -0.51
PRPF38B-201ENST00000370021 FBXO18Q8NFZ0 1043 aa11.87□□□□□ -0.51
PRPF38B-201ENST00000370021 ATRIPQ8WXE1 791 aa11.87□□□□□ -0.51
PRPF38B-201ENST00000370021 L2HGDHQ9H9P8 463 aa11.87□□□□□ -0.51
PRPF38B-201ENST00000370021 SERTAD1Q9UHV2 236 aa11.87□□□□□ -0.51
PRPF38B-201ENST00000370021 CARMIL3Q8ND23 1372 aa11.87□□□□□ -0.51
PRPF38B-201ENST00000370021 KRT40Q6A162 431 aa11.87□□□□□ -0.51
PRPF38B-201ENST00000370021 GOLGA6L9A6NEM1 432 aa11.87□□□□□ -0.51
PRPF38B-201ENST00000370021 B4E1Z4 1266 aa11.87□□□□□ -0.51
PRPF38B-201ENST00000370021 IFIT3O14879 490 aaKnown RBP11.87□□□□□ -0.51
PRPF38B-201ENST00000370021 SSBP05455 408 aaKnown RBP eCLIP11.87□□□□□ -0.51
PRPF38B-201ENST00000370021 PI16Q6UXB8 463 aa11.87□□□□□ -0.51
PRPF38B-201ENST00000370021 ENGASEQ8NFI3 743 aa11.87□□□□□ -0.51
PRPF38B-201ENST00000370021 LLPHQ9BRT6 129 aaKnown RBP11.87□□□□□ -0.51
PRPF38B-201ENST00000370021 RTEL1Q9NZ71 1219 aa11.87□□□□□ -0.51
PRPF38B-201ENST00000370021 SAMM50Q9Y512 469 aa11.87□□□□□ -0.51
PRPF38B-201ENST00000370021 EIF3CLB5ME19 914 aaKnown RBP11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 KIF28PB7ZC32 967 aa11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 CCT5P48643 541 aa11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 KBTBD3Q8NAB2 608 aa11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 NCOA7Q8NI08 942 aa11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 EIF3CQ99613 913 aaKnown RBP11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 INCENPQ9NQS7 918 aa11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 PHLPP2Q6ZVD8 1323 aa11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 VWA3AA6NCI4 1184 aa11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 CCDC70Q6NSX1 233 aa11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 RBM43Q6ZSC3 357 aaKnown RBP11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 SRLQ86TD4 932 aa11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 RABGGTAQ92696 567 aa11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 PLIN2Q99541 437 aa11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 NRKQ7Z2Y5 1582 aa11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 AATKQ6ZMQ8 1374 aa11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 UBE2Q2LH0YL09 131 aa11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 TEX33O43247 280 aa11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 TMEM67Q5HYA8 995 aa11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 CEP112Q8N8E3 955 aa11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 MRPL44Q9H9J2 332 aaKnown RBP11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 ATP7BP35670 1465 aa11.86□□□□□ -0.51
PRPF38B-201ENST00000370021 SPATA31D1Q6ZQQ2 1576 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 FAM170AA1A519 330 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 KIAA0754O94854 1291 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 EIF5P55010 431 aaKnown RBP11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 CCDC57Q2TAC2 916 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 DACH1Q9UI36 760 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 MACROD2A1Z1Q3 448 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 SRGAP2O75044 1071 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 GIGYF1O75420 1035 aaPredicted RBP11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 RDXP35241 583 aaKnown RBP11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 GCKRQ14397 625 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 SLC4A8Q2Y0W8 1093 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 VSTM4Q8IW00 320 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 REXO1L1PQ8IX06 675 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 CDK12Q9NYV4 1490 aaPredicted RBP11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 BTBD18B2RXH4 712 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 ATP5JP18859 108 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 CASP14P31944 242 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 RNASE9P60153 205 aaKnown RBP11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 PDE4BQ07343 736 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 RBL2Q08999 1139 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 TRIM22Q8IYM9 498 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 AFAP1L1Q8TED9 768 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 GBP3Q9H0R5 595 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 TFR2Q9UP52 801 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 SLC12A7Q9Y666 1083 aa11.85□□□□□ -0.51
PRPF38B-201ENST00000370021 ERICH2A1L162 156 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 CMA1P23946 247 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 CDC25AP30304 524 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 CASP8Q14790 479 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 TRIM65Q6PJ69 517 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 SRGAP1Q7Z6B7 1085 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 EXOC4Q96A65 974 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 FUT8Q9BYC5 575 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 CABP5Q9NP86 173 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 MINDY4BA8MYZ0 360 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 ZBTB43O43298 467 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 ZPR1O75312 459 aa11.84□□□□□ -0.51
PRPF38B-201ENST00000370021 VSNL1P62760 191 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms