RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 CYB5R4Q7L1T6 521 aa16.74■□□□□ 0.27
HMGCS2-201ENST00000369406 STK11IPQ8N1F8 1099 aa16.74■□□□□ 0.27
HMGCS2-201ENST00000369406 CERS5Q8N5B7 392 aa16.74■□□□□ 0.27
HMGCS2-201ENST00000369406 UPF1Q92900 1129 aaKnown RBP eCLIP16.74■□□□□ 0.27
HMGCS2-201ENST00000369406 BRF1Q92994 677 aa16.74■□□□□ 0.27
HMGCS2-201ENST00000369406 CHAMP1Q96JM3 812 aa16.74■□□□□ 0.27
HMGCS2-201ENST00000369406 CIZ1Q9ULV3 898 aaPredicted RBP16.74■□□□□ 0.27
HMGCS2-201ENST00000369406 FOCADQ5VW36 1801 aa16.74■□□□□ 0.27
HMGCS2-201ENST00000369406 LDHBP07195 334 aaKnown RBP16.73■□□□□ 0.27
HMGCS2-201ENST00000369406 STK3Q13188 491 aa16.73■□□□□ 0.27
HMGCS2-201ENST00000369406 DZIP1Q86YF9 867 aaKnown RBP16.73■□□□□ 0.27
HMGCS2-201ENST00000369406 INTS4Q96HW7 963 aaKnown RBP16.73■□□□□ 0.27
HMGCS2-201ENST00000369406 NAPBQ9H115 298 aa16.73■□□□□ 0.27
HMGCS2-201ENST00000369406 COL4A5P29400 1685 aa16.73■□□□□ 0.27
HMGCS2-201ENST00000369406 DDX60LQ5H9U9 1706 aaKnown RBP16.73■□□□□ 0.27
HMGCS2-201ENST00000369406 GTF2IP78347 998 aa16.72■□□□□ 0.27
HMGCS2-201ENST00000369406 SLC16A10Q8TF71 515 aa16.72■□□□□ 0.27
HMGCS2-201ENST00000369406 TCHHQ07283 1943 aa16.72■□□□□ 0.27
HMGCS2-201ENST00000369406 APOBRQ0VD83 1088 aa16.72■□□□□ 0.27
HMGCS2-201ENST00000369406 MFSD14BQ5SR56 506 aa16.72■□□□□ 0.27
HMGCS2-201ENST00000369406 AGXT2Q9BYV1 514 aa16.72■□□□□ 0.27
HMGCS2-201ENST00000369406 DBNDD1Q9H9R9 158 aa16.72■□□□□ 0.27
HMGCS2-201ENST00000369406 FAM205AQ6ZU69 1335 aa16.72■□□□□ 0.27
HMGCS2-201ENST00000369406 C21orf2O43822 256 aa16.71■□□□□ 0.27
HMGCS2-201ENST00000369406 TDO2P48775 406 aa16.71■□□□□ 0.27
HMGCS2-201ENST00000369406 CNKSR1Q969H4 720 aa16.71■□□□□ 0.27
HMGCS2-201ENST00000369406 SENP2Q9HC62 589 aa16.71■□□□□ 0.27
HMGCS2-201ENST00000369406 PSME4Q14997 1843 aa16.71■□□□□ 0.27
HMGCS2-201ENST00000369406 B4E1Z4 1266 aa16.71■□□□□ 0.27
HMGCS2-201ENST00000369406 GNAT2P19087 354 aa16.71■□□□□ 0.27
HMGCS2-201ENST00000369406 ZC3H12CQ9C0D7 883 aaKnown RBP16.71■□□□□ 0.27
HMGCS2-201ENST00000369406 COA1Q9GZY4 146 aa16.71■□□□□ 0.27
HMGCS2-201ENST00000369406 CYP2D6P10635 497 aa16.7■□□□□ 0.26
HMGCS2-201ENST00000369406 SH3RF3Q8TEJ3 882 aaPredicted RBP16.7■□□□□ 0.26
HMGCS2-201ENST00000369406 RTFDC1Q9BY42 306 aaPredicted RBP16.7■□□□□ 0.26
HMGCS2-201ENST00000369406 PSDA5PKW4 1024 aaPredicted RBP16.7■□□□□ 0.26
HMGCS2-201ENST00000369406 PRC1O43663 620 aa16.7■□□□□ 0.26
HMGCS2-201ENST00000369406 FOXD4L5Q5VV16 416 aaPredicted RBP16.7■□□□□ 0.26
HMGCS2-201ENST00000369406 SPTY2D1Q68D10 685 aaPredicted RBP16.7■□□□□ 0.26
HMGCS2-201ENST00000369406 FOXD4L4Q8WXT5 416 aaPredicted RBP16.7■□□□□ 0.26
HMGCS2-201ENST00000369406 ECM29Q5VYK3 1845 aa16.7■□□□□ 0.26
HMGCS2-201ENST00000369406 MYH1P12882 1939 aa16.7■□□□□ 0.26
HMGCS2-201ENST00000369406 HMGB1P09429 215 aaKnown RBP16.69■□□□□ 0.26
HMGCS2-201ENST00000369406 IL27Q8NEV9 243 aa16.69■□□□□ 0.26
HMGCS2-201ENST00000369406 NCOA7Q8NI08 942 aa16.69■□□□□ 0.26
HMGCS2-201ENST00000369406 FBXW7Q969H0 707 aa16.69■□□□□ 0.26
HMGCS2-201ENST00000369406 ZSCAN31Q96LW9 406 aaPredicted RBP16.69■□□□□ 0.26
HMGCS2-201ENST00000369406 CWC22Q9HCG8 908 aaKnown RBP16.69■□□□□ 0.26
HMGCS2-201ENST00000369406 SH2B1Q9NRF2 756 aaPredicted RBP16.69■□□□□ 0.26
HMGCS2-201ENST00000369406 BRPF3Q9ULD4 1205 aa16.69■□□□□ 0.26
HMGCS2-201ENST00000369406 PPARAQ07869 468 aa16.69■□□□□ 0.26
HMGCS2-201ENST00000369406 SLC4A8Q2Y0W8 1093 aa16.69■□□□□ 0.26
HMGCS2-201ENST00000369406 DCP1AQ9NPI6 582 aaPredicted RBP16.69■□□□□ 0.26
HMGCS2-201ENST00000369406 MROH7-TTC4A0A0A0MT08 1334 aa16.69■□□□□ 0.26
HMGCS2-201ENST00000369406 MINDY4BA8MYZ0 360 aa16.68■□□□□ 0.26
HMGCS2-201ENST00000369406 SCRN1Q12765 414 aa16.68■□□□□ 0.26
HMGCS2-201ENST00000369406 ANKRD1Q15327 319 aa16.68■□□□□ 0.26
HMGCS2-201ENST00000369406 AOC3Q16853 763 aa16.68■□□□□ 0.26
HMGCS2-201ENST00000369406 CTR9Q6PD62 1173 aa16.68■□□□□ 0.26
HMGCS2-201ENST00000369406 RAB11FIP4Q86YS3 637 aa16.68■□□□□ 0.26
HMGCS2-201ENST00000369406 F8W031 263 aaPredicted RBP16.68■□□□□ 0.26
HMGCS2-201ENST00000369406 GTF3C6Q969F1 213 aa16.68■□□□□ 0.26
HMGCS2-201ENST00000369406 SGIP1Q9BQI5 828 aa16.68■□□□□ 0.26
HMGCS2-201ENST00000369406 NACAP1Q9BZK3 213 aa16.68■□□□□ 0.26
HMGCS2-201ENST00000369406 MKRN1Q9UHC7 482 aaKnown RBP16.68■□□□□ 0.26
HMGCS2-201ENST00000369406 JAK2O60674 1132 aa16.67■□□□□ 0.26
HMGCS2-201ENST00000369406 AKNAD1Q5T1N1 836 aa16.67■□□□□ 0.26
HMGCS2-201ENST00000369406 NCOA5Q9HCD5 579 aaKnown RBP16.67■□□□□ 0.26
HMGCS2-201ENST00000369406 FER1L6Q2WGJ9 1857 aa16.67■□□□□ 0.26
HMGCS2-201ENST00000369406 USP17L12C9JPN9 530 aa16.67■□□□□ 0.26
HMGCS2-201ENST00000369406 USP17L21D6R901 530 aa16.67■□□□□ 0.26
HMGCS2-201ENST00000369406 GJB2P29033 226 aa16.67■□□□□ 0.26
HMGCS2-201ENST00000369406 MCM5P33992 734 aa16.67■□□□□ 0.26
HMGCS2-201ENST00000369406 TTLL6Q8N841 843 aa16.67■□□□□ 0.26
HMGCS2-201ENST00000369406 STAG1Q8WVM7 1258 aa16.67■□□□□ 0.26
HMGCS2-201ENST00000369406 MTFR1LQ9H019 292 aa16.67■□□□□ 0.26
HMGCS2-201ENST00000369406 PPFIA3O75145 1194 aa16.66■□□□□ 0.26
HMGCS2-201ENST00000369406 KDM4AO75164 1064 aa16.66■□□□□ 0.26
HMGCS2-201ENST00000369406 CTDNEP1O95476 244 aa16.66■□□□□ 0.26
HMGCS2-201ENST00000369406 BTDP43251 543 aa16.66■□□□□ 0.26
HMGCS2-201ENST00000369406 RALYLQ86SE5 291 aaKnown RBP16.66■□□□□ 0.26
HMGCS2-201ENST00000369406 ZSWIM5Q9P217 1185 aa16.66■□□□□ 0.26
HMGCS2-201ENST00000369406 ECE2O60344 883 aa16.66■□□□□ 0.26
HMGCS2-201ENST00000369406 BRD1O95696 1058 aa16.66■□□□□ 0.26
HMGCS2-201ENST00000369406 USP17L8P0C7I0 530 aa16.66■□□□□ 0.26
HMGCS2-201ENST00000369406 PDIA3P30101 505 aaKnown RBP16.66■□□□□ 0.26
HMGCS2-201ENST00000369406 CCT2P78371 535 aaKnown RBP16.66■□□□□ 0.26
HMGCS2-201ENST00000369406 FGD1P98174 961 aa16.66■□□□□ 0.26
HMGCS2-201ENST00000369406 FBXL16Q8N461 479 aa16.66■□□□□ 0.26
HMGCS2-201ENST00000369406 CRNKL1Q9BZJ0 848 aaKnown RBP16.66■□□□□ 0.26
HMGCS2-201ENST00000369406 ANAPC4Q9UJX5 808 aa16.66■□□□□ 0.26
HMGCS2-201ENST00000369406 HPS5Q9UPZ3 1129 aa16.66■□□□□ 0.26
HMGCS2-201ENST00000369406 PCDHAC2Q9Y5I4 1007 aa16.66■□□□□ 0.26
HMGCS2-201ENST00000369406 GAKO14976 1311 aa16.66■□□□□ 0.26
HMGCS2-201ENST00000369406 YDJCA8MPS7 323 aa16.65■□□□□ 0.26
HMGCS2-201ENST00000369406 PFKFB2O60825 505 aa16.65■□□□□ 0.26
HMGCS2-201ENST00000369406 RHBDL3P58872 404 aa16.65■□□□□ 0.26
HMGCS2-201ENST00000369406 RRP12Q5JTH9 1297 aaKnown RBP16.65■□□□□ 0.26
HMGCS2-201ENST00000369406 EYA3Q99504 573 aa16.65■□□□□ 0.26
HMGCS2-201ENST00000369406 ZKSCAN3Q9BRR0 538 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms