RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 SPECC1LQ69YQ0 1117 aa21.44■■□□□ 1.02
PRDM1-202ENST00000369091 GPHNQ9NQX3 736 aaPredicted RBP21.44■■□□□ 1.02
PRDM1-202ENST00000369091 DONSONQ9NYP3 566 aa21.44■■□□□ 1.02
PRDM1-202ENST00000369091 RAB11FIP4Q86YS3 637 aa21.43■■□□□ 1.02
PRDM1-202ENST00000369091 MED4Q9NPJ6 270 aa21.43■■□□□ 1.02
PRDM1-202ENST00000369091 KCNQ3O43525 872 aa21.43■■□□□ 1.02
PRDM1-202ENST00000369091 PRPF6O94906 941 aaKnown RBP21.43■■□□□ 1.02
PRDM1-202ENST00000369091 CMA1P23946 247 aa21.43■■□□□ 1.02
PRDM1-202ENST00000369091 OLFM4Q6UX06 510 aa21.43■■□□□ 1.02
PRDM1-202ENST00000369091 FAM212AQ96EL1 285 aa21.43■■□□□ 1.02
PRDM1-202ENST00000369091 MAP3K2Q9Y2U5 619 aa21.43■■□□□ 1.02
PRDM1-202ENST00000369091 IGSF1Q8N6C5 1336 aa21.43■■□□□ 1.02
PRDM1-202ENST00000369091 ACEP12821 1306 aa21.42■■□□□ 1.02
PRDM1-202ENST00000369091 KIF5CO60282 957 aa21.42■■□□□ 1.02
PRDM1-202ENST00000369091 ABL1P00519 1130 aa21.42■■□□□ 1.02
PRDM1-202ENST00000369091 BMP6P22004 513 aa21.42■■□□□ 1.02
PRDM1-202ENST00000369091 TRMT44Q8IYL2 757 aaKnown RBP21.42■■□□□ 1.02
PRDM1-202ENST00000369091 SLC35F6Q8N357 371 aa21.42■■□□□ 1.02
PRDM1-202ENST00000369091 IGSF22Q8N9C0 903 aa21.42■■□□□ 1.02
PRDM1-202ENST00000369091 GDAP1L1Q96MZ0 367 aa21.42■■□□□ 1.02
PRDM1-202ENST00000369091 CDC5LQ99459 802 aaKnown RBP21.42■■□□□ 1.02
PRDM1-202ENST00000369091 C19orf44Q9H6X5 657 aa21.42■■□□□ 1.02
PRDM1-202ENST00000369091 ANO1Q5XXA6 986 aa21.42■■□□□ 1.02
PRDM1-202ENST00000369091 C8orf76Q96K31 380 aa21.42■■□□□ 1.02
PRDM1-202ENST00000369091 EHD4Q9H223 541 aa21.42■■□□□ 1.02
PRDM1-202ENST00000369091 ADGRG1Q9Y653 693 aa21.42■■□□□ 1.02
PRDM1-202ENST00000369091 ATP6V1AP38606 617 aa21.42■■□□□ 1.02
PRDM1-202ENST00000369091 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.42■■□□□ 1.02
PRDM1-202ENST00000369091 FOXP4Q8IVH2 680 aaPredicted RBP21.42■■□□□ 1.02
PRDM1-202ENST00000369091 KAZALD1Q96I82 304 aa21.42■■□□□ 1.02
PRDM1-202ENST00000369091 TEX13AQ9BXU3 409 aaPredicted RBP21.42■■□□□ 1.02
PRDM1-202ENST00000369091 FOXN1O15353 648 aa21.41■■□□□ 1.02
PRDM1-202ENST00000369091 METTL16Q86W50 562 aaKnown RBP21.41■■□□□ 1.02
PRDM1-202ENST00000369091 EXOSC10Q01780 885 aaKnown RBP21.41■■□□□ 1.02
PRDM1-202ENST00000369091 FMR1Q06787 632 aaKnown RBP eCLIP21.41■■□□□ 1.02
PRDM1-202ENST00000369091 CPLX3Q8WVH0 158 aa21.41■■□□□ 1.02
PRDM1-202ENST00000369091 FAM169AQ9Y6X4 670 aa21.41■■□□□ 1.02
PRDM1-202ENST00000369091 METP08581 1390 aa21.4■■□□□ 1.02
PRDM1-202ENST00000369091 CTAGE15A4D2H0 777 aa21.4■■□□□ 1.02
PRDM1-202ENST00000369091 CTAGE8P0CG41 777 aa21.4■■□□□ 1.02
PRDM1-202ENST00000369091 AMPHP49418 695 aa21.4■■□□□ 1.02
PRDM1-202ENST00000369091 SYNE3Q6ZMZ3 975 aa21.4■■□□□ 1.02
PRDM1-202ENST00000369091 CTAGE6Q86UF2 777 aa21.4■■□□□ 1.02
PRDM1-202ENST00000369091 CTAGE4Q8IX94 777 aa21.4■■□□□ 1.02
PRDM1-202ENST00000369091 ACBD3Q9H3P7 528 aa21.4■■□□□ 1.02
PRDM1-202ENST00000369091 CCDC9Q9Y3X0 531 aaKnown RBP21.4■■□□□ 1.02
PRDM1-202ENST00000369091 NCAPH2Q6IBW4 605 aa21.4■■□□□ 1.02
PRDM1-202ENST00000369091 SHC4Q6S5L8 630 aa21.4■■□□□ 1.02
PRDM1-202ENST00000369091 GBP3Q9H0R5 595 aa21.4■■□□□ 1.02
PRDM1-202ENST00000369091 CDHR2Q9BYE9 1310 aa21.39■■□□□ 1.02
PRDM1-202ENST00000369091 LAMA4Q16363 1823 aa21.39■■□□□ 1.02
PRDM1-202ENST00000369091 CTAGE9A4FU28 777 aa21.39■■□□□ 1.01
PRDM1-202ENST00000369091 NFE2L3Q9Y4A8 694 aa21.39■■□□□ 1.01
PRDM1-202ENST00000369091 PCDHA5Q9Y5H7 936 aa21.39■■□□□ 1.01
PRDM1-202ENST00000369091 AKAP17AQ02040 695 aaKnown RBP21.39■■□□□ 1.01
PRDM1-202ENST00000369091 DDX46Q7L014 1031 aaKnown RBP21.39■■□□□ 1.01
PRDM1-202ENST00000369091 SMARCC1Q92922 1105 aaPredicted RBP21.39■■□□□ 1.01
PRDM1-202ENST00000369091 KAT14Q9H8E8 782 aa21.39■■□□□ 1.01
PRDM1-202ENST00000369091 RAI14Q9P0K7 980 aa21.39■■□□□ 1.01
PRDM1-202ENST00000369091 NCAPD2Q15021 1401 aa21.38■■□□□ 1.01
PRDM1-202ENST00000369091 EIF4A1P60842 406 aaKnown RBP21.38■■□□□ 1.01
PRDM1-202ENST00000369091 ZNF827Q17R98 1081 aa21.38■■□□□ 1.01
PRDM1-202ENST00000369091 MCMDC2Q4G0Z9 681 aa21.38■■□□□ 1.01
PRDM1-202ENST00000369091 PROSER3Q2NL68 480 aa21.38■■□□□ 1.01
PRDM1-202ENST00000369091 HPCAL4Q9UM19 191 aa21.38■■□□□ 1.01
PRDM1-202ENST00000369091 FLT4P35916 1363 aa21.38■■□□□ 1.01
PRDM1-202ENST00000369091 LONRF3Q496Y0 759 aa21.37■■□□□ 1.01
PRDM1-202ENST00000369091 ACRBPQ8NEB7 543 aa21.37■■□□□ 1.01
PRDM1-202ENST00000369091 AKR1B15C9JRZ8 316 aaPredicted RBP21.37■■□□□ 1.01
PRDM1-202ENST00000369091 HMGB1P09429 215 aaKnown RBP21.37■■□□□ 1.01
PRDM1-202ENST00000369091 AARSP49588 968 aaKnown RBP eCLIP21.37■■□□□ 1.01
PRDM1-202ENST00000369091 GSPT2Q8IYD1 628 aaKnown RBP21.37■■□□□ 1.01
PRDM1-202ENST00000369091 ZNF622Q969S3 477 aaKnown RBP eCLIP21.37■■□□□ 1.01
PRDM1-202ENST00000369091 LTV1Q96GA3 475 aaPredicted RBP21.37■■□□□ 1.01
PRDM1-202ENST00000369091 AGXT2Q9BYV1 514 aa21.37■■□□□ 1.01
PRDM1-202ENST00000369091 KCNG1Q9UIX4 513 aa21.37■■□□□ 1.01
PRDM1-202ENST00000369091 DBNLQ9UJU6 430 aaKnown RBP21.37■■□□□ 1.01
PRDM1-202ENST00000369091 HPSEQ9Y251 543 aa21.37■■□□□ 1.01
PRDM1-202ENST00000369091 USP31Q70CQ4 1352 aa21.37■■□□□ 1.01
PRDM1-202ENST00000369091 E7EWF7 191 aa21.36■■□□□ 1.01
PRDM1-202ENST00000369091 TEX33O43247 280 aa21.36■■□□□ 1.01
PRDM1-202ENST00000369091 USHBP1Q8N6Y0 703 aa21.36■■□□□ 1.01
PRDM1-202ENST00000369091 SAMSN1Q9NSI8 373 aaKnown RBP21.36■■□□□ 1.01
PRDM1-202ENST00000369091 ARHGEF25Q86VW2 580 aa21.36■■□□□ 1.01
PRDM1-202ENST00000369091 ZC3H4Q9UPT8 1303 aaKnown RBP21.35■■□□□ 1.01
PRDM1-202ENST00000369091 FMN2Q9NZ56 1722 aa21.35■■□□□ 1.01
PRDM1-202ENST00000369091 GGCXP38435 758 aa21.35■■□□□ 1.01
PRDM1-202ENST00000369091 SBNO1A3KN83 1393 aa21.35■■□□□ 1.01
PRDM1-202ENST00000369091 ZMYND10O75800 440 aa21.35■■□□□ 1.01
PRDM1-202ENST00000369091 ZNF18P17022 549 aa21.35■■□□□ 1.01
PRDM1-202ENST00000369091 KIF23Q02241 960 aaPredicted RBP21.35■■□□□ 1.01
PRDM1-202ENST00000369091 RBL2Q08999 1139 aa21.35■■□□□ 1.01
PRDM1-202ENST00000369091 FAM107BQ9H098 131 aa21.35■■□□□ 1.01
PRDM1-202ENST00000369091 SLC39A14Q15043 492 aa21.34■■□□□ 1.01
PRDM1-202ENST00000369091 ZNF274Q96GC6 653 aaPredicted RBP21.34■■□□□ 1.01
PRDM1-202ENST00000369091 NAPGQ99747 312 aaPredicted RBP21.34■■□□□ 1.01
PRDM1-202ENST00000369091 CCDC196A0A1B0GTZ2 297 aa21.34■■□□□ 1.01
PRDM1-202ENST00000369091 EBAG9O00559 213 aa21.34■■□□□ 1.01
PRDM1-202ENST00000369091 SPECC1Q5M775 1068 aa21.34■■□□□ 1.01
PRDM1-202ENST00000369091 TTC19Q6DKK2 380 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms