RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 VPS33BQ9H267 617 aa28.4■■■□□ 2.14
SNX3-203ENST00000368979 PDRG1Q9NUG6 133 aa28.4■■■□□ 2.14
SNX3-203ENST00000368979 FKBP1AP62942 108 aaKnown RBP28.39■■■□□ 2.14
SNX3-203ENST00000368979 SDR42E1Q8WUS8 393 aa28.39■■■□□ 2.14
SNX3-203ENST00000368979 FAM163AQ96GL9 167 aaPredicted RBP28.39■■■□□ 2.14
SNX3-203ENST00000368979 PSME4Q14997 1843 aa28.39■■■□□ 2.13
SNX3-203ENST00000368979 AK2P54819 239 aa28.38■■■□□ 2.13
SNX3-203ENST00000368979 PPP4CP60510 307 aa28.38■■■□□ 2.13
SNX3-203ENST00000368979 STRIP1Q5VSL9 837 aa28.38■■■□□ 2.13
SNX3-203ENST00000368979 NBPF3Q9H094 633 aa28.38■■■□□ 2.13
SNX3-203ENST00000368979 ALDH8A1Q9H2A2 487 aaPredicted RBP28.38■■■□□ 2.13
SNX3-203ENST00000368979 KCNQ5Q9NR82 932 aa28.38■■■□□ 2.13
SNX3-203ENST00000368979 GAKO14976 1311 aa28.38■■■□□ 2.13
SNX3-203ENST00000368979 COL4A5P29400 1685 aa28.38■■■□□ 2.13
SNX3-203ENST00000368979 HMGB1P09429 215 aaKnown RBP28.38■■■□□ 2.13
SNX3-203ENST00000368979 GIMAP6Q6P9H5 292 aa28.38■■■□□ 2.13
SNX3-203ENST00000368979 SLF2Q8IX21 1173 aa28.38■■■□□ 2.13
SNX3-203ENST00000368979 CRNKL1Q9BZJ0 848 aaKnown RBP28.38■■■□□ 2.13
SNX3-203ENST00000368979 TDO2P48775 406 aa28.37■■■□□ 2.13
SNX3-203ENST00000368979 BAG3O95817 575 aa28.36■■■□□ 2.13
SNX3-203ENST00000368979 DACT2Q5SW24 774 aa28.36■■■□□ 2.13
SNX3-203ENST00000368979 CERS3Q8IU89 383 aa28.36■■■□□ 2.13
SNX3-203ENST00000368979 MXD3Q9BW11 206 aa28.36■■■□□ 2.13
SNX3-203ENST00000368979 ZNF277Q9NRM2 450 aaPredicted RBP28.36■■■□□ 2.13
SNX3-203ENST00000368979 ARFGEF1Q9Y6D6 1849 aa28.35■■■□□ 2.13
SNX3-203ENST00000368979 GPR75-ASB3A0A0A6YYF3 556 aa28.35■■■□□ 2.13
SNX3-203ENST00000368979 TBC1D10CQ8IV04 446 aa28.35■■■□□ 2.13
SNX3-203ENST00000368979 NLGN2Q8NFZ4 835 aa28.35■■■□□ 2.13
SNX3-203ENST00000368979 TMX3Q96JJ7 454 aa28.35■■■□□ 2.13
SNX3-203ENST00000368979 USP17L3A6NCW0 530 aa28.34■■■□□ 2.13
SNX3-203ENST00000368979 USP17L4A6NCW7 530 aa28.34■■■□□ 2.13
SNX3-203ENST00000368979 YDJCA8MPS7 323 aa28.34■■■□□ 2.13
SNX3-203ENST00000368979 USP17L1Q7RTZ2 530 aa28.34■■■□□ 2.13
SNX3-203ENST00000368979 NOL10Q9BSC4 688 aaKnown RBP28.34■■■□□ 2.13
SNX3-203ENST00000368979 ATP8A2Q9NTI2 1148 aa28.34■■■□□ 2.13
SNX3-203ENST00000368979 BTDP43251 543 aa28.33■■■□□ 2.13
SNX3-203ENST00000368979 DHX32Q7L7V1 743 aaKnown RBP28.33■■■□□ 2.13
SNX3-203ENST00000368979 LAMB1P07942 1786 aa28.33■■■□□ 2.13
SNX3-203ENST00000368979 NOL8Q76FK4 1167 aaKnown RBP28.33■■■□□ 2.13
SNX3-203ENST00000368979 LARGE2Q8N3Y3 721 aa28.33■■■□□ 2.13
SNX3-203ENST00000368979 SPRYD3Q8NCJ5 442 aa28.33■■■□□ 2.13
SNX3-203ENST00000368979 DCP1AQ9NPI6 582 aaPredicted RBP28.33■■■□□ 2.13
SNX3-203ENST00000368979 TTF2Q9UNY4 1162 aaKnown RBP28.33■■■□□ 2.13
SNX3-203ENST00000368979 BCS1LQ9Y276 419 aa28.33■■■□□ 2.13
SNX3-203ENST00000368979 DAGLAQ9Y4D2 1042 aa28.33■■■□□ 2.13
SNX3-203ENST00000368979 EXOSC10Q01780 885 aaKnown RBP28.32■■■□□ 2.12
SNX3-203ENST00000368979 SH3RF3Q8TEJ3 882 aaPredicted RBP28.32■■■□□ 2.12
SNX3-203ENST00000368979 TCEANC2Q96MN5 208 aa28.32■■■□□ 2.12
SNX3-203ENST00000368979 TAOK3Q9H2K8 898 aa28.32■■■□□ 2.12
SNX3-203ENST00000368979 LIMCH1Q9UPQ0 1083 aa28.32■■■□□ 2.12
SNX3-203ENST00000368979 BAZ2AQ9UIF9 1905 aaKnown RBP28.31■■■□□ 2.12
SNX3-203ENST00000368979 CDK5RAP2Q96SN8 1893 aa28.31■■■□□ 2.12
SNX3-203ENST00000368979 ADAMTSL1Q8N6G6 1762 aa28.31■■■□□ 2.12
SNX3-203ENST00000368979 IARSP41252 1262 aaKnown RBP28.31■■■□□ 2.12
SNX3-203ENST00000368979 ANKRD1Q15327 319 aa28.31■■■□□ 2.12
SNX3-203ENST00000368979 MB21D2Q8IYB1 491 aaPredicted RBP28.31■■■□□ 2.12
SNX3-203ENST00000368979 NCOA7Q8NI08 942 aa28.31■■■□□ 2.12
SNX3-203ENST00000368979 ANAPC4Q9UJX5 808 aa28.31■■■□□ 2.12
SNX3-203ENST00000368979 NAV1Q8NEY1 1877 aa28.3■■■□□ 2.12
SNX3-203ENST00000368979 F8W031 263 aaPredicted RBP28.3■■■□□ 2.12
SNX3-203ENST00000368979 NFKBIEO00221 500 aa28.3■■■□□ 2.12
SNX3-203ENST00000368979 PPARAQ07869 468 aa28.3■■■□□ 2.12
SNX3-203ENST00000368979 CUL4AQ13619 759 aa28.3■■■□□ 2.12
SNX3-203ENST00000368979 TOB2Q14106 344 aaPredicted RBP28.3■■■□□ 2.12
SNX3-203ENST00000368979 SLKQ9H2G2 1235 aaPredicted RBP28.3■■■□□ 2.12
SNX3-203ENST00000368979 MKRN1Q9UHC7 482 aaKnown RBP28.3■■■□□ 2.12
SNX3-203ENST00000368979 PLCG2P16885 1265 aa28.29■■■□□ 2.12
SNX3-203ENST00000368979 CTDSPL2Q05D32 466 aa28.29■■■□□ 2.12
SNX3-203ENST00000368979 DDX60LQ5H9U9 1706 aaKnown RBP28.29■■■□□ 2.12
SNX3-203ENST00000368979 LTBP3Q9NS15 1303 aa28.29■■■□□ 2.12
SNX3-203ENST00000368979 HSP90AA1P07900 732 aaKnown RBP28.28■■■□□ 2.12
SNX3-203ENST00000368979 RHBDL3P58872 404 aa28.28■■■□□ 2.12
SNX3-203ENST00000368979 CTR9Q6PD62 1173 aa28.28■■■□□ 2.12
SNX3-203ENST00000368979 HHIPL2Q6UWX4 724 aa28.28■■■□□ 2.12
SNX3-203ENST00000368979 STAG1Q8WVM7 1258 aa28.28■■■□□ 2.12
SNX3-203ENST00000368979 FOCADQ5VW36 1801 aa28.28■■■□□ 2.12
SNX3-203ENST00000368979 NEDD4P46934 1319 aa28.28■■■□□ 2.12
SNX3-203ENST00000368979 DDIT3P35638 169 aa28.28■■■□□ 2.12
SNX3-203ENST00000368979 AKNAD1Q5T1N1 836 aa28.28■■■□□ 2.12
SNX3-203ENST00000368979 Q6ZUG5 572 aa28.28■■■□□ 2.12
SNX3-203ENST00000368979 RALYLQ86SE5 291 aaKnown RBP28.28■■■□□ 2.12
SNX3-203ENST00000368979 MRIQ9BWK5 157 aa28.28■■■□□ 2.12
SNX3-203ENST00000368979 AGXT2Q9BYV1 514 aa28.28■■■□□ 2.12
SNX3-203ENST00000368979 TACC3Q9Y6A5 838 aa28.28■■■□□ 2.12
SNX3-203ENST00000368979 WDR19Q8NEZ3 1342 aa28.27■■■□□ 2.12
SNX3-203ENST00000368979 TRDNQ13061 729 aa28.27■■■□□ 2.12
SNX3-203ENST00000368979 SBK1Q52WX2 424 aa28.27■■■□□ 2.12
SNX3-203ENST00000368979 NIM1KQ8IY84 436 aa28.27■■■□□ 2.12
SNX3-203ENST00000368979 ZSCAN31Q96LW9 406 aaPredicted RBP28.27■■■□□ 2.12
SNX3-203ENST00000368979 LARP6Q9BRS8 491 aaKnown RBP28.27■■■□□ 2.12
SNX3-203ENST00000368979 ARPP21Q9UBL0 812 aaPredicted RBP28.27■■■□□ 2.12
SNX3-203ENST00000368979 USP5P45974 858 aa28.26■■■□□ 2.11
SNX3-203ENST00000368979 SCNN1DP51172 638 aa28.26■■■□□ 2.11
SNX3-203ENST00000368979 HDLBPQ00341 1268 aaKnown RBP28.26■■■□□ 2.11
SNX3-203ENST00000368979 KIAA0825Q8IV33 1275 aa28.26■■■□□ 2.11
SNX3-203ENST00000368979 FBXL16Q8N461 479 aa28.26■■■□□ 2.11
SNX3-203ENST00000368979 TEKT1Q969V4 418 aa28.26■■■□□ 2.11
SNX3-203ENST00000368979 TPCN1Q9ULQ1 816 aa28.26■■■□□ 2.11
SNX3-203ENST00000368979 MINDY4BA8MYZ0 360 aa28.25■■■□□ 2.11
SNX3-203ENST00000368979 USP17L12C9JPN9 530 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms