RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 RGS12O14924 1447 aa11.59□□□□□ -0.55
SCNM1-202ENST00000368905 NCOA3Q9Y6Q9 1424 aa11.59□□□□□ -0.55
SCNM1-202ENST00000368905 FOXO3O43524 673 aa11.59□□□□□ -0.55
SCNM1-202ENST00000368905 SETSIPP0DME0 302 aa11.59□□□□□ -0.55
SCNM1-202ENST00000368905 PTK7Q13308 1070 aa11.59□□□□□ -0.55
SCNM1-202ENST00000368905 ESCO1Q5FWF5 840 aa11.59□□□□□ -0.55
SCNM1-202ENST00000368905 ZNF496Q96IT1 587 aaPredicted RBP11.59□□□□□ -0.55
SCNM1-202ENST00000368905 XIRP1Q702N8 1843 aaKnown RBP11.59□□□□□ -0.55
SCNM1-202ENST00000368905 TMEM110-MUSTN1A8MSY1 372 aa11.59□□□□□ -0.55
SCNM1-202ENST00000368905 ACBD5Q5T8D3 534 aaPredicted RBP11.59□□□□□ -0.55
SCNM1-202ENST00000368905 BRSK2Q8IWQ3 736 aa11.59□□□□□ -0.55
SCNM1-202ENST00000368905 PHC3Q8NDX5 983 aa11.59□□□□□ -0.55
SCNM1-202ENST00000368905 TBC1D31Q96DN5 1066 aa11.59□□□□□ -0.55
SCNM1-202ENST00000368905 RBM33Q96EV2 1170 aaKnown RBP11.59□□□□□ -0.55
SCNM1-202ENST00000368905 LZTS2Q9BRK4 669 aa11.59□□□□□ -0.55
SCNM1-202ENST00000368905 GTPBP4Q9BZE4 634 aaKnown RBP11.59□□□□□ -0.55
SCNM1-202ENST00000368905 TRIM6Q9C030 488 aaPredicted RBP11.59□□□□□ -0.55
SCNM1-202ENST00000368905 TSPY26PQ9H489 355 aa11.59□□□□□ -0.55
SCNM1-202ENST00000368905 DCAF16Q9NXF7 216 aa11.59□□□□□ -0.55
SCNM1-202ENST00000368905 LTN1O94822 1766 aa11.58□□□□□ -0.56
SCNM1-202ENST00000368905 ORC4O43929 436 aa11.58□□□□□ -0.56
SCNM1-202ENST00000368905 PSMA3P25788 255 aa11.58□□□□□ -0.56
SCNM1-202ENST00000368905 GNL2Q13823 731 aaKnown RBP11.58□□□□□ -0.56
SCNM1-202ENST00000368905 RASA3Q14644 834 aa11.58□□□□□ -0.56
SCNM1-202ENST00000368905 KRT24Q2M2I5 525 aa11.58□□□□□ -0.56
SCNM1-202ENST00000368905 ZFPM2Q8WW38 1151 aa11.58□□□□□ -0.56
SCNM1-202ENST00000368905 TBC1D20Q96BZ9 403 aa11.58□□□□□ -0.56
SCNM1-202ENST00000368905 PHRF1Q9P1Y6 1649 aaKnown RBP11.57□□□□□ -0.56
SCNM1-202ENST00000368905 CDC45O75419 566 aa11.57□□□□□ -0.56
SCNM1-202ENST00000368905 CCDC15Q0P6D6 951 aa11.57□□□□□ -0.56
SCNM1-202ENST00000368905 AMOTQ4VCS5 1084 aa11.57□□□□□ -0.56
SCNM1-202ENST00000368905 TMEM164Q5U3C3 297 aa11.57□□□□□ -0.56
SCNM1-202ENST00000368905 CEP85Q6P2H3 762 aa11.57□□□□□ -0.56
SCNM1-202ENST00000368905 MNS1Q8NEH6 495 aa11.57□□□□□ -0.56
SCNM1-202ENST00000368905 APPL2Q8NEU8 664 aa11.57□□□□□ -0.56
SCNM1-202ENST00000368905 SYAP1Q96A49 352 aaPredicted RBP11.57□□□□□ -0.56
SCNM1-202ENST00000368905 RNPC3Q96LT9 517 aaKnown RBP11.57□□□□□ -0.56
SCNM1-202ENST00000368905 MSH6P52701 1360 aa11.57□□□□□ -0.56
SCNM1-202ENST00000368905 GTPBP10A4D1E9 387 aaKnown RBP11.57□□□□□ -0.56
SCNM1-202ENST00000368905 GNAI3P08754 354 aa11.57□□□□□ -0.56
SCNM1-202ENST00000368905 MDM2Q00987 491 aaPredicted RBP11.57□□□□□ -0.56
SCNM1-202ENST00000368905 CTR9Q6PD62 1173 aa11.57□□□□□ -0.56
SCNM1-202ENST00000368905 IFNL3Q8IZI9 196 aa11.57□□□□□ -0.56
SCNM1-202ENST00000368905 STK11IPQ8N1F8 1099 aa11.57□□□□□ -0.56
SCNM1-202ENST00000368905 BHMTQ93088 406 aa11.57□□□□□ -0.56
SCNM1-202ENST00000368905 LTV1Q96GA3 475 aaPredicted RBP11.57□□□□□ -0.56
SCNM1-202ENST00000368905 TSPYL1Q9H0U9 437 aa11.57□□□□□ -0.56
SCNM1-202ENST00000368905 HOXC10Q9NYD6 342 aa11.57□□□□□ -0.56
SCNM1-202ENST00000368905 MIS18AQ9NYP9 233 aa11.57□□□□□ -0.56
SCNM1-202ENST00000368905 TFIP11Q9UBB9 837 aaKnown RBP11.57□□□□□ -0.56
SCNM1-202ENST00000368905 NFAT5O94916 1531 aa11.57□□□□□ -0.56
SCNM1-202ENST00000368905 OAS2P29728 719 aaKnown RBP11.56□□□□□ -0.56
SCNM1-202ENST00000368905 FAM133BQ5BKY9 247 aaKnown RBP11.56□□□□□ -0.56
SCNM1-202ENST00000368905 KLHL23Q8NBE8 558 aa11.56□□□□□ -0.56
SCNM1-202ENST00000368905 E2F7Q96AV8 911 aa11.56□□□□□ -0.56
SCNM1-202ENST00000368905 SLX1AQ9BQ83 275 aa11.56□□□□□ -0.56
SCNM1-202ENST00000368905 RIC8AQ9NPQ8 531 aa11.56□□□□□ -0.56
SCNM1-202ENST00000368905 ATP10DQ9P241 1426 aa11.56□□□□□ -0.56
SCNM1-202ENST00000368905 CCP110O43303 1012 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 GNAI2P04899 355 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 HOXB7P09629 217 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 STIP1P31948 543 aaKnown RBP11.55□□□□□ -0.56
SCNM1-202ENST00000368905 ALFQ53S48 1182 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 SNX32Q86XE0 403 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 STAG2Q8N3U4 1231 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 GIMAP1Q8WWP7 306 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 NELL1Q92832 810 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 SNX21Q969T3 373 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 SERINC2Q96SA4 455 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 HOMER2Q9NSB8 354 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 RABL2AQ9UBK7 228 aaPredicted RBP11.55□□□□□ -0.56
SCNM1-202ENST00000368905 XPO7Q9UIA9 1087 aaKnown RBP11.55□□□□□ -0.56
SCNM1-202ENST00000368905 DCCP43146 1447 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 LILRB3O75022 631 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 XBP1P17861 261 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 NFX1Q12986 1120 aaKnown RBP11.55□□□□□ -0.56
SCNM1-202ENST00000368905 FXNQ16595 210 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 PLEKHO1Q53GL0 409 aaPredicted RBP11.55□□□□□ -0.56
SCNM1-202ENST00000368905 PLEKHG4Q58EX7 1191 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 PDXDC2PQ6P474 469 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 SLC4A10Q6U841 1118 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 C11orf74Q86VG3 221 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 TEKT1Q969V4 418 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 GINM1Q9NU53 330 aa11.55□□□□□ -0.56
SCNM1-202ENST00000368905 PXDNLA1KZ92 1463 aa11.54□□□□□ -0.56
SCNM1-202ENST00000368905 TSPAN6O43657 245 aa11.54□□□□□ -0.56
SCNM1-202ENST00000368905 FKBP5Q13451 457 aaPredicted RBP11.54□□□□□ -0.56
SCNM1-202ENST00000368905 PLEKHM2Q8IWE5 1019 aa11.54□□□□□ -0.56
SCNM1-202ENST00000368905 TMEM87AQ8NBN3 555 aa11.54□□□□□ -0.56
SCNM1-202ENST00000368905 IL17REQ8NFR9 667 aa11.54□□□□□ -0.56
SCNM1-202ENST00000368905 RPGRQ92834 1020 aaKnown RBP11.54□□□□□ -0.56
SCNM1-202ENST00000368905 MEIS3Q99687 375 aa11.54□□□□□ -0.56
SCNM1-202ENST00000368905 C19orf44Q9H6X5 657 aa11.54□□□□□ -0.56
SCNM1-202ENST00000368905 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.54□□□□□ -0.56
SCNM1-202ENST00000368905 DONSONQ9NYP3 566 aa11.54□□□□□ -0.56
SCNM1-202ENST00000368905 PAXBP1Q9Y5B6 917 aa11.54□□□□□ -0.56
SCNM1-202ENST00000368905 KIF1AQ12756 1690 aa11.54□□□□□ -0.56
SCNM1-202ENST00000368905 C19orf81C9J6K1 198 aa11.53□□□□□ -0.56
SCNM1-202ENST00000368905 PRRT4C9JH25 899 aa11.53□□□□□ -0.56
SCNM1-202ENST00000368905 TTC22Q5TAA0 569 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms