RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 NAA16Q6N069 864 aaPredicted RBP22.69■■□□□ 1.22
LMNA-204ENST00000368298 PPP2R3BQ9Y5P8 575 aa22.69■■□□□ 1.22
LMNA-204ENST00000368298 ADM5C9JUS6 153 aa22.68■■□□□ 1.22
LMNA-204ENST00000368298 IDH1O75874 414 aaKnown RBP22.68■■□□□ 1.22
LMNA-204ENST00000368298 MAP4K4O95819 1239 aaPredicted RBP22.68■■□□□ 1.22
LMNA-204ENST00000368298 TSHZ3Q63HK5 1081 aa22.68■■□□□ 1.22
LMNA-204ENST00000368298 CDC42EP5Q6NZY7 148 aa22.68■■□□□ 1.22
LMNA-204ENST00000368298 EDC3Q96F86 508 aaKnown RBP22.68■■□□□ 1.22
LMNA-204ENST00000368298 TNFAIP1Q13829 316 aa22.67■■□□□ 1.22
LMNA-204ENST00000368298 DEFB129Q9H1M3 183 aa22.67■■□□□ 1.22
LMNA-204ENST00000368298 OSBPL3Q9H4L5 887 aa22.67■■□□□ 1.22
LMNA-204ENST00000368298 PPP4CP60510 307 aa22.66■■□□□ 1.22
LMNA-204ENST00000368298 FMR1Q06787 632 aaKnown RBP eCLIP22.66■■□□□ 1.221e-9■■■□□ 18.3
LMNA-204ENST00000368298 CST9Q5W186 159 aa22.66■■□□□ 1.22
LMNA-204ENST00000368298 BTDP43251 543 aa22.66■■□□□ 1.22
LMNA-204ENST00000368298 HTRA3P83110 453 aa22.66■■□□□ 1.22
LMNA-204ENST00000368298 ADGRA1Q86SQ6 560 aa22.66■■□□□ 1.22
LMNA-204ENST00000368298 FAM83AQ86UY5 434 aa22.66■■□□□ 1.22
LMNA-204ENST00000368298 PLEKHM2Q8IWE5 1019 aa22.66■■□□□ 1.22
LMNA-204ENST00000368298 VEZTQ9HBM0 779 aa22.66■■□□□ 1.22
LMNA-204ENST00000368298 USP40Q9NVE5 1235 aa22.66■■□□□ 1.22
LMNA-204ENST00000368298 TMOD2Q9NZR1 351 aa22.66■■□□□ 1.22
LMNA-204ENST00000368298 RHBDL3P58872 404 aa22.65■■□□□ 1.22
LMNA-204ENST00000368298 SLC9C2Q5TAH2 1124 aa22.65■■□□□ 1.22
LMNA-204ENST00000368298 DLK2Q6UY11 383 aa22.65■■□□□ 1.22
LMNA-204ENST00000368298 CENPQQ7L2Z9 268 aaPredicted RBP22.65■■□□□ 1.22
LMNA-204ENST00000368298 MAGEB6Q8N7X4 407 aa22.65■■□□□ 1.22
LMNA-204ENST00000368298 CDCA5Q96FF9 252 aa22.65■■□□□ 1.22
LMNA-204ENST00000368298 IDI2Q9BXS1 227 aa22.65■■□□□ 1.22
LMNA-204ENST00000368298 SCAF8Q9UPN6 1271 aaKnown RBP22.65■■□□□ 1.22
LMNA-204ENST00000368298 TMEM88BA6NKF7 163 aa22.64■■□□□ 1.21
LMNA-204ENST00000368298 CYP7A1P22680 504 aa22.64■■□□□ 1.21
LMNA-204ENST00000368298 TNNI2P48788 182 aa22.64■■□□□ 1.21
LMNA-204ENST00000368298 RASA3Q14644 834 aa22.64■■□□□ 1.21
LMNA-204ENST00000368298 KBTBD3Q8NAB2 608 aa22.64■■□□□ 1.21
LMNA-204ENST00000368298 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.64■■□□□ 1.213e-7■■■■□ 19.4
LMNA-204ENST00000368298 TSHZ2Q9NRE2 1034 aa22.64■■□□□ 1.21
LMNA-204ENST00000368298 CNTNAP1P78357 1384 aa22.64■■□□□ 1.21
LMNA-204ENST00000368298 RFX7Q2KHR2 1363 aa22.64■■□□□ 1.21
LMNA-204ENST00000368298 TCRBV5S4A2TA0A5A2 114 aa22.63■■□□□ 1.21
LMNA-204ENST00000368298 NPM3O75607 178 aaKnown RBP22.63■■□□□ 1.21
LMNA-204ENST00000368298 BAG3O95817 575 aa22.63■■□□□ 1.21
LMNA-204ENST00000368298 PDE6AP16499 860 aa22.63■■□□□ 1.21
LMNA-204ENST00000368298 CERS3Q8IU89 383 aa22.63■■□□□ 1.21
LMNA-204ENST00000368298 CREBZFQ9NS37 354 aa22.63■■□□□ 1.21
LMNA-204ENST00000368298 MYH7P12883 1935 aa22.63■■□□□ 1.21
LMNA-204ENST00000368298 TCP10L2B9ZVM9 353 aa22.62■■□□□ 1.21
LMNA-204ENST00000368298 CELF2O95319 508 aaKnown RBP22.62■■□□□ 1.21
LMNA-204ENST00000368298 PLCG2P16885 1265 aa22.62■■□□□ 1.21
LMNA-204ENST00000368298 ADD2P35612 726 aa22.62■■□□□ 1.21
LMNA-204ENST00000368298 CACNB3P54284 484 aa22.62■■□□□ 1.21
LMNA-204ENST00000368298 TEPSINQ96N21 525 aa22.62■■□□□ 1.21
LMNA-204ENST00000368298 WDHD1O75717 1129 aaPredicted RBP22.61■■□□□ 1.21
LMNA-204ENST00000368298 PDE4AP27815 886 aa22.61■■□□□ 1.21
LMNA-204ENST00000368298 DNAJC5GQ8N7S2 189 aa22.61■■□□□ 1.21
LMNA-204ENST00000368298 NOL10Q9BSC4 688 aaKnown RBP22.61■■□□□ 1.21
LMNA-204ENST00000368298 FAM198AQ9UFP1 575 aa22.61■■□□□ 1.21
LMNA-204ENST00000368298 RPAP1Q9BWH6 1393 aaPredicted RBP22.61■■□□□ 1.21
LMNA-204ENST00000368298 ENTPD3O75355 529 aa22.6■■□□□ 1.21
LMNA-204ENST00000368298 NFIAQ12857 509 aa22.6■■□□□ 1.21
LMNA-204ENST00000368298 UBE3CQ15386 1083 aa22.6■■□□□ 1.21
LMNA-204ENST00000368298 PRAMEF18Q5VWM3 479 aa22.6■■□□□ 1.21
LMNA-204ENST00000368298 ZSCAN25Q6NSZ9 544 aa22.6■■□□□ 1.21
LMNA-204ENST00000368298 FAM151AQ8WW52 585 aa22.6■■□□□ 1.21
LMNA-204ENST00000368298 AATFQ9NY61 560 aaKnown RBP eCLIP22.6■■□□□ 1.21
LMNA-204ENST00000368298 ZNF532Q9HCE3 1301 aa22.6■■□□□ 1.21
LMNA-204ENST00000368298 SUPT20HL1Q3ZLR7 823 aa22.6■■□□□ 1.21
LMNA-204ENST00000368298 TICAM2Q86XR7 235 aa22.6■■□□□ 1.21
LMNA-204ENST00000368298 FKBP1BP68106 108 aa22.59■■□□□ 1.21
LMNA-204ENST00000368298 TMEM39BQ9GZU3 492 aa22.59■■□□□ 1.21
LMNA-204ENST00000368298 ZFYP08048 801 aaPredicted RBP22.58■■□□□ 1.2
LMNA-204ENST00000368298 NF2P35240 595 aa22.58■■□□□ 1.2
LMNA-204ENST00000368298 SH3RF3Q8TEJ3 882 aaPredicted RBP22.58■■□□□ 1.2
LMNA-204ENST00000368298 EVI5LQ96CN4 794 aa22.58■■□□□ 1.2
LMNA-204ENST00000368298 RIOK1Q9BRS2 568 aaKnown RBP22.58■■□□□ 1.2
LMNA-204ENST00000368298 ZNF408Q9H9D4 720 aa22.58■■□□□ 1.2
LMNA-204ENST00000368298 GBA2Q9HCG7 927 aaPredicted RBP22.58■■□□□ 1.2
LMNA-204ENST00000368298 TLL2Q9Y6L7 1015 aa22.58■■□□□ 1.2
LMNA-204ENST00000368298 RGS3P49796 1198 aa22.57■■□□□ 1.2
LMNA-204ENST00000368298 LRRFIP1Q32MZ4 808 aaKnown RBP22.57■■□□□ 1.2
LMNA-204ENST00000368298 NBPF12Q5TAG4 269 aaPredicted RBP22.57■■□□□ 1.2
LMNA-204ENST00000368298 C2orf69Q8N8R5 385 aa22.57■■□□□ 1.2
LMNA-204ENST00000368298 DDX4Q9NQI0 724 aaKnown RBP22.57■■□□□ 1.2
LMNA-204ENST00000368298 FOCADQ5VW36 1801 aa22.57■■□□□ 1.2
LMNA-204ENST00000368298 SSC5DA1L4H1 1573 aa22.57■■□□□ 1.2
LMNA-204ENST00000368298 CDK5RAP2Q96SN8 1893 aa22.57■■□□□ 1.2
LMNA-204ENST00000368298 PAPPA2Q9BXP8 1791 aa22.56■■□□□ 1.2
LMNA-204ENST00000368298 DYNLL1P63167 89 aaKnown RBP22.56■■□□□ 1.2
LMNA-204ENST00000368298 SAPCD2Q86UD0 394 aa22.56■■□□□ 1.2
LMNA-204ENST00000368298 TEX11Q8IYF3 940 aa22.56■■□□□ 1.2
LMNA-204ENST00000368298 MIGA1Q8NAN2 632 aa22.56■■□□□ 1.2
LMNA-204ENST00000368298 HHIPL1Q96JK4 782 aa22.56■■□□□ 1.2
LMNA-204ENST00000368298 COL2A1P02458 1487 aaPredicted RBP22.56■■□□□ 1.2
LMNA-204ENST00000368298 MAGEB6P1A0A0J9YX57 407 aa22.55■■□□□ 1.2
LMNA-204ENST00000368298 RNF113AO15541 343 aaKnown RBP22.55■■□□□ 1.2
LMNA-204ENST00000368298 TCP10Q12799 353 aa22.55■■□□□ 1.2
LMNA-204ENST00000368298 ATRNL1Q5VV63 1379 aa22.55■■□□□ 1.2
LMNA-204ENST00000368298 MAP3K11Q16584 847 aa22.54■■□□□ 1.2
LMNA-204ENST00000368298 CDAN1Q8IWY9 1227 aa22.54■■□□□ 1.2
LMNA-204ENST00000368298 ZFPM1Q8IX07 1006 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms