RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 ZBTB43O43298 467 aa16.55■□□□□ 0.24
CD48-201ENST00000368045 APPP05067 770 aa16.55■□□□□ 0.24
CD48-201ENST00000368045 KCNJ6P48051 423 aa16.55■□□□□ 0.24
CD48-201ENST00000368045 TRIM29Q14134 588 aa16.55■□□□□ 0.24
CD48-201ENST00000368045 DPCR1Q3MIW9 517 aa16.55■□□□□ 0.24
CD48-201ENST00000368045 CEP135Q66GS9 1140 aa16.55■□□□□ 0.24
CD48-201ENST00000368045 KRT40Q6A162 431 aa16.55■□□□□ 0.24
CD48-201ENST00000368045 SMAP1Q8IYB5 467 aaPredicted RBP16.55■□□□□ 0.24
CD48-201ENST00000368045 SYNE4Q8N205 404 aa16.55■□□□□ 0.24
CD48-201ENST00000368045 AIDAQ96BJ3 306 aa16.55■□□□□ 0.24
CD48-201ENST00000368045 CNNM2Q9H8M5 875 aa16.55■□□□□ 0.24
CD48-201ENST00000368045 HPSEQ9Y251 543 aa16.55■□□□□ 0.24
CD48-201ENST00000368045 DISP2A7MBM2 1401 aa16.55■□□□□ 0.24
CD48-201ENST00000368045 MYO1BO43795 1136 aa16.54■□□□□ 0.24
CD48-201ENST00000368045 SLC5A1P13866 664 aa16.54■□□□□ 0.24
CD48-201ENST00000368045 U2AF2P26368 475 aaKnown RBP eCLIP16.54■□□□□ 0.24
CD48-201ENST00000368045 IL6STP40189 918 aaPredicted RBP16.54■□□□□ 0.24
CD48-201ENST00000368045 PHKA1P46020 1223 aa16.54■□□□□ 0.24
CD48-201ENST00000368045 NYAP1Q6ZVC0 841 aa16.54■□□□□ 0.24
CD48-201ENST00000368045 VPS37DQ86XT2 251 aa16.54■□□□□ 0.24
CD48-201ENST00000368045 IGDCC4Q8TDY8 1250 aa16.54■□□□□ 0.24
CD48-201ENST00000368045 WASF1Q92558 559 aa16.54■□□□□ 0.24
CD48-201ENST00000368045 MTA3Q9BTC8 594 aa16.54■□□□□ 0.24
CD48-201ENST00000368045 TUBE1Q9UJT0 475 aa16.54■□□□□ 0.24
CD48-201ENST00000368045 ANKRD36CQ5JPF3 1778 aa16.54■□□□□ 0.24
CD48-201ENST00000368045 PATL2C9JE40 543 aaKnown RBP16.54■□□□□ 0.24
CD48-201ENST00000368045 IARSP41252 1262 aaKnown RBP16.54■□□□□ 0.24
CD48-201ENST00000368045 PTPN14Q15678 1187 aa16.54■□□□□ 0.24
CD48-201ENST00000368045 FILIP1Q7Z7B0 1213 aa16.54■□□□□ 0.24
CD48-201ENST00000368045 ELOA2Q8IYF1 753 aaPredicted RBP16.54■□□□□ 0.24
CD48-201ENST00000368045 ZNF34Q8IZ26 560 aa16.54■□□□□ 0.24
CD48-201ENST00000368045 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.54■□□□□ 0.24
CD48-201ENST00000368045 GOLGA8AA7E2F4 631 aa16.53■□□□□ 0.24
CD48-201ENST00000368045 NRDCO43847 1150 aa16.53■□□□□ 0.24
CD48-201ENST00000368045 SYKP43405 635 aa16.53■□□□□ 0.24
CD48-201ENST00000368045 MAP3K12Q12852 859 aa16.53■□□□□ 0.24
CD48-201ENST00000368045 GNL2Q13823 731 aaKnown RBP16.53■□□□□ 0.24
CD48-201ENST00000368045 PTPAQ15257 358 aa16.53■□□□□ 0.24
CD48-201ENST00000368045 TMEM67Q5HYA8 995 aa16.53■□□□□ 0.24
CD48-201ENST00000368045 NBPF11Q86T75 865 aa16.53■□□□□ 0.24
CD48-201ENST00000368045 RAB11FIP4Q86YS3 637 aa16.53■□□□□ 0.24
CD48-201ENST00000368045 LY9Q9HBG7 655 aa16.53■□□□□ 0.24
CD48-201ENST00000368045 ARAP2Q8WZ64 1704 aa16.52■□□□□ 0.24
CD48-201ENST00000368045 A0A087WWV3 80 aa16.52■□□□□ 0.24
CD48-201ENST00000368045 B4E1Z4 1266 aa16.52■□□□□ 0.24
CD48-201ENST00000368045 CUTAO60888 179 aa16.52■□□□□ 0.24
CD48-201ENST00000368045 WDHD1O75717 1129 aaPredicted RBP16.52■□□□□ 0.24
CD48-201ENST00000368045 TUBB4AP04350 444 aa16.52■□□□□ 0.24
CD48-201ENST00000368045 GNAT2P19087 354 aa16.52■□□□□ 0.24
CD48-201ENST00000368045 NTRK3Q16288 839 aa16.52■□□□□ 0.24
CD48-201ENST00000368045 NFXL1Q6ZNB6 911 aa16.52■□□□□ 0.24
CD48-201ENST00000368045 CCAR2Q8N163 923 aaKnown RBP16.52■□□□□ 0.24
CD48-201ENST00000368045 SPATA5Q8NB90 893 aa16.52■□□□□ 0.24
CD48-201ENST00000368045 KRT23Q9C075 422 aa16.52■□□□□ 0.24
CD48-201ENST00000368045 WWC3Q9ULE0 1092 aa16.52■□□□□ 0.24
CD48-201ENST00000368045 MROH7-TTC4A0A0A0MT08 1334 aa16.52■□□□□ 0.24
CD48-201ENST00000368045 CDC27P30260 824 aa16.51■□□□□ 0.23
CD48-201ENST00000368045 RCAN1P53805 252 aa16.51■□□□□ 0.23
CD48-201ENST00000368045 NCBP1Q09161 790 aaKnown RBP16.51■□□□□ 0.23
CD48-201ENST00000368045 ARID5BQ14865 1188 aa16.51■□□□□ 0.23
CD48-201ENST00000368045 NCAPHQ15003 741 aa16.51■□□□□ 0.23
CD48-201ENST00000368045 RESP18Q5W5W9 173 aa16.51■□□□□ 0.23
CD48-201ENST00000368045 DZIP3Q86Y13 1208 aaKnown RBP16.51■□□□□ 0.23
CD48-201ENST00000368045 ERCC4Q92889 916 aaPredicted RBP16.51■□□□□ 0.23
CD48-201ENST00000368045 MAP3K14Q99558 947 aa16.51■□□□□ 0.23
CD48-201ENST00000368045 GJB4Q9NTQ9 266 aa16.51■□□□□ 0.23
CD48-201ENST00000368045 ZBTB1Q9Y2K1 713 aa16.51■□□□□ 0.23
CD48-201ENST00000368045 TIAM2Q8IVF5 1701 aa16.51■□□□□ 0.23
CD48-201ENST00000368045 MYH3P11055 1940 aa16.51■□□□□ 0.23
CD48-201ENST00000368045 SMC2O95347 1197 aa16.51■□□□□ 0.23
CD48-201ENST00000368045 IFNAR1P17181 557 aa16.51■□□□□ 0.23
CD48-201ENST00000368045 HSPA2P54652 639 aa16.51■□□□□ 0.23
CD48-201ENST00000368045 SSRP1Q08945 709 aaKnown RBP16.51■□□□□ 0.23
CD48-201ENST00000368045 PPP4R3BQ5MIZ7 849 aa16.51■□□□□ 0.23
CD48-201ENST00000368045 MICU3Q86XE3 530 aa16.51■□□□□ 0.23
CD48-201ENST00000368045 IFNL3Q8IZI9 196 aa16.51■□□□□ 0.23
CD48-201ENST00000368045 SLC4A9Q96Q91 983 aa16.51■□□□□ 0.23
CD48-201ENST00000368045 NOL10Q9BSC4 688 aaKnown RBP16.51■□□□□ 0.23
CD48-201ENST00000368045 XPO4Q9C0E2 1151 aaKnown RBP16.51■□□□□ 0.23
CD48-201ENST00000368045 ZMYND15Q9H091 742 aa16.51■□□□□ 0.23
CD48-201ENST00000368045 NAPBQ9H115 298 aa16.51■□□□□ 0.23
CD48-201ENST00000368045 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.5■□□□□ 0.23
CD48-201ENST00000368045 PSDA5PKW4 1024 aaPredicted RBP16.5■□□□□ 0.23
CD48-201ENST00000368045 CBFA2T2O43439 604 aa16.5■□□□□ 0.23
CD48-201ENST00000368045 FMNL1O95466 1100 aaPredicted RBP16.5■□□□□ 0.23
CD48-201ENST00000368045 FEZ1Q99689 392 aa16.5■□□□□ 0.23
CD48-201ENST00000368045 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.5■□□□□ 0.23
CD48-201ENST00000368045 NACAP1Q9BZK3 213 aa16.5■□□□□ 0.23
CD48-201ENST00000368045 FAM217BQ9NTX9 383 aaPredicted RBP16.5■□□□□ 0.23
CD48-201ENST00000368045 IFNKQ9P0W0 207 aa16.5■□□□□ 0.23
CD48-201ENST00000368045 CGNQ9P2M7 1197 aaKnown RBP16.5■□□□□ 0.23
CD48-201ENST00000368045 SLC12A7Q9Y666 1083 aa16.5■□□□□ 0.23
CD48-201ENST00000368045 UBN2Q6ZU65 1347 aa16.5■□□□□ 0.23
CD48-201ENST00000368045 PNPLA7Q6ZV29 1317 aa16.5■□□□□ 0.23
CD48-201ENST00000368045 NHSL1Q5SYE7 1610 aa16.5■□□□□ 0.23
CD48-201ENST00000368045 FAM177BA6PVY3 158 aa16.49■□□□□ 0.23
CD48-201ENST00000368045 IFIT3O14879 490 aaKnown RBP16.49■□□□□ 0.23
CD48-201ENST00000368045 RANBP6O60518 1105 aaKnown RBP16.49■□□□□ 0.23
CD48-201ENST00000368045 MARCKSP29966 332 aaPredicted RBP16.49■□□□□ 0.23
CD48-201ENST00000368045 AKNAD1Q5T1N1 836 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms