RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 BCRP11274 1271 aa18.81■□□□□ 0.6
VAMP4-202ENST00000367740 ELNP15502 786 aa18.81■□□□□ 0.6
VAMP4-202ENST00000367740 CRKP46108 304 aa18.81■□□□□ 0.6
VAMP4-202ENST00000367740 PPATQ06203 517 aa18.81■□□□□ 0.6
VAMP4-202ENST00000367740 NEXNQ0ZGT2 675 aa18.81■□□□□ 0.6
VAMP4-202ENST00000367740 MOGSQ13724 837 aa18.81■□□□□ 0.6
VAMP4-202ENST00000367740 CAPN2P17655 700 aa18.8■□□□□ 0.6
VAMP4-202ENST00000367740 MAGEA10P43363 369 aaPredicted RBP18.8■□□□□ 0.6
VAMP4-202ENST00000367740 CACNB3P54284 484 aa18.8■□□□□ 0.6
VAMP4-202ENST00000367740 CASP7P55210 303 aa18.8■□□□□ 0.6
VAMP4-202ENST00000367740 CDH23Q9H251 3354 aa18.79■□□□□ 0.6
VAMP4-202ENST00000367740 RPTORQ8N122 1335 aa18.79■□□□□ 0.6
VAMP4-202ENST00000367740 NECAB2Q7Z6G3 386 aa18.79■□□□□ 0.6
VAMP4-202ENST00000367740 C8orf58Q8NAV2 365 aa18.79■□□□□ 0.6
VAMP4-202ENST00000367740 RUNDC1Q96C34 613 aa18.79■□□□□ 0.6
VAMP4-202ENST00000367740 PRDM6Q9NQX0 595 aa18.79■□□□□ 0.6
VAMP4-202ENST00000367740 KCNH4Q9UQ05 1017 aa18.79■□□□□ 0.6
VAMP4-202ENST00000367740 ANKRD18BA2A2Z9 1011 aa18.78■□□□□ 0.6
VAMP4-202ENST00000367740 SYN1P17600 705 aa18.78■□□□□ 0.6
VAMP4-202ENST00000367740 FLT3LGP49771 235 aa18.78■□□□□ 0.6
VAMP4-202ENST00000367740 PXYLP1Q8TE99 480 aa18.78■□□□□ 0.6
VAMP4-202ENST00000367740 DOCK3Q8IZD9 2030 aa18.78■□□□□ 0.6
VAMP4-202ENST00000367740 CYP2C8P10632 490 aa18.77■□□□□ 0.6
VAMP4-202ENST00000367740 INPP5BP32019 993 aa18.77■□□□□ 0.6
VAMP4-202ENST00000367740 GCKRQ14397 625 aa18.77■□□□□ 0.6
VAMP4-202ENST00000367740 GRIK5Q16478 980 aa18.77■□□□□ 0.6
VAMP4-202ENST00000367740 CCDC30Q5VVM6 783 aa18.77■□□□□ 0.6
VAMP4-202ENST00000367740 TDRD7Q8NHU6 1098 aaKnown RBP18.77■□□□□ 0.6
VAMP4-202ENST00000367740 GUCD1Q96NT3 240 aa18.77■□□□□ 0.6
VAMP4-202ENST00000367740 PARK7Q99497 189 aaKnown RBP18.77■□□□□ 0.6
VAMP4-202ENST00000367740 RPAP1Q9BWH6 1393 aaPredicted RBP18.77■□□□□ 0.6
VAMP4-202ENST00000367740 PTPRFP10586 1907 aa18.76■□□□□ 0.59
VAMP4-202ENST00000367740 IFT57Q9NWB7 429 aa18.76■□□□□ 0.59
VAMP4-202ENST00000367740 COL2A1P02458 1487 aaPredicted RBP18.76■□□□□ 0.59
VAMP4-202ENST00000367740 IRF5Q13568 498 aa18.75■□□□□ 0.59
VAMP4-202ENST00000367740 GPAT2Q6NUI2 795 aa18.75■□□□□ 0.59
VAMP4-202ENST00000367740 FAM83AQ86UY5 434 aa18.75■□□□□ 0.59
VAMP4-202ENST00000367740 DCAF15Q66K64 600 aa18.74■□□□□ 0.59
VAMP4-202ENST00000367740 HOOK2Q96ED9 719 aa18.74■□□□□ 0.59
VAMP4-202ENST00000367740 ZNF341Q9BYN7 854 aa18.74■□□□□ 0.59
VAMP4-202ENST00000367740 UBE2OQ9C0C9 1292 aaKnown RBP18.74■□□□□ 0.59
VAMP4-202ENST00000367740 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.74■□□□□ 0.59
VAMP4-202ENST00000367740 DNAH12Q6ZR08 3092 aa18.74■□□□□ 0.59
VAMP4-202ENST00000367740 GYG1P46976 350 aa18.73■□□□□ 0.59
VAMP4-202ENST00000367740 MIGA2Q7L4E1 593 aa18.73■□□□□ 0.59
VAMP4-202ENST00000367740 ANKLE1Q8NAG6 615 aa18.73■□□□□ 0.59
VAMP4-202ENST00000367740 TTC28Q96AY4 2481 aa18.73■□□□□ 0.59
VAMP4-202ENST00000367740 AK9Q5TCS8 1911 aa18.72■□□□□ 0.59
VAMP4-202ENST00000367740 PLIN1O60240 522 aa18.72■□□□□ 0.59
VAMP4-202ENST00000367740 GNAI1P63096 354 aa18.72■□□□□ 0.59
VAMP4-202ENST00000367740 IFIT5Q13325 482 aaKnown RBP18.72■□□□□ 0.59
VAMP4-202ENST00000367740 TSPYL6Q8N831 410 aa18.72■□□□□ 0.59
VAMP4-202ENST00000367740 POTEB2H3BUK9 544 aa18.71■□□□□ 0.59
VAMP4-202ENST00000367740 TNPO2O14787 897 aaKnown RBP18.71■□□□□ 0.59
VAMP4-202ENST00000367740 HIBADHP31937 336 aaKnown RBP18.71■□□□□ 0.59
VAMP4-202ENST00000367740 FOXO4P98177 505 aa18.71■□□□□ 0.59
VAMP4-202ENST00000367740 HDLBPQ00341 1268 aaKnown RBP18.71■□□□□ 0.59
VAMP4-202ENST00000367740 FKBP1CQ5VVH2 108 aa18.71■□□□□ 0.59
VAMP4-202ENST00000367740 FAM109BQ6ICB4 259 aaPredicted RBP18.71■□□□□ 0.59
VAMP4-202ENST00000367740 G2E3Q7L622 706 aa18.71■□□□□ 0.59
VAMP4-202ENST00000367740 ZNF112Q9UJU3 913 aa18.71■□□□□ 0.59
VAMP4-202ENST00000367740 TEKT1Q969V4 418 aa18.7■□□□□ 0.58
VAMP4-202ENST00000367740 ZNF594Q96JF6 807 aaPredicted RBP18.7■□□□□ 0.58
VAMP4-202ENST00000367740 FAM84BQ96KN1 310 aaPredicted RBP18.7■□□□□ 0.58
VAMP4-202ENST00000367740 ZDHHC15Q96MV8 337 aa18.7■□□□□ 0.58
VAMP4-202ENST00000367740 CHMP4AQ9BY43 222 aa18.7■□□□□ 0.58
VAMP4-202ENST00000367740 NBPF3Q9H094 633 aa18.7■□□□□ 0.58
VAMP4-202ENST00000367740 TMOD2Q9NZR1 351 aa18.7■□□□□ 0.58
VAMP4-202ENST00000367740 PHIPQ8WWQ0 1821 aa18.7■□□□□ 0.58
VAMP4-202ENST00000367740 DOCK2Q92608 1830 aa18.7■□□□□ 0.58
VAMP4-202ENST00000367740 NOL9Q5SY16 702 aaKnown RBP18.69■□□□□ 0.58
VAMP4-202ENST00000367740 FAM161BQ96MY7 647 aa18.69■□□□□ 0.58
VAMP4-202ENST00000367740 MYH16Q9H6N6 1097 aa18.69■□□□□ 0.58
VAMP4-202ENST00000367740 TAOK2Q9UL54 1235 aa18.69■□□□□ 0.58
VAMP4-202ENST00000367740 CHMP3Q9Y3E7 222 aa18.69■□□□□ 0.58
VAMP4-202ENST00000367740 APOBEC3HQ6NTF7 200 aaKnown RBP18.68■□□□□ 0.58
VAMP4-202ENST00000367740 LDHAL6AQ6ZMR3 332 aa18.68■□□□□ 0.58
VAMP4-202ENST00000367740 C11orf49Q9H6J7 331 aa18.68■□□□□ 0.58
VAMP4-202ENST00000367740 PLXNB2O15031 1838 aa18.67■□□□□ 0.58
VAMP4-202ENST00000367740 CXCL11O14625 94 aa18.67■□□□□ 0.58
VAMP4-202ENST00000367740 UBE4AQ14139 1066 aa18.67■□□□□ 0.58
VAMP4-202ENST00000367740 STK31Q9BXU1 1019 aa18.67■□□□□ 0.58
VAMP4-202ENST00000367740 CNNM1Q9NRU3 951 aa18.67■□□□□ 0.58
VAMP4-202ENST00000367740 IQSEC3Q9UPP2 1182 aaPredicted RBP18.67■□□□□ 0.58
VAMP4-202ENST00000367740 PFASO15067 1338 aa18.67■□□□□ 0.58
VAMP4-202ENST00000367740 MYH13Q9UKX3 1938 aa18.66■□□□□ 0.58
VAMP4-202ENST00000367740 A0A0G2JLL6 359 aaPredicted RBP18.66■□□□□ 0.58
VAMP4-202ENST00000367740 CHAF1AQ13111 956 aaPredicted RBP18.66■□□□□ 0.58
VAMP4-202ENST00000367740 PRRT2Q7Z6L0 340 aaPredicted RBP18.66■□□□□ 0.58
VAMP4-202ENST00000367740 LINS1Q8NG48 757 aa18.66■□□□□ 0.58
VAMP4-202ENST00000367740 ADAMTS8Q9UP79 889 aa18.66■□□□□ 0.58
VAMP4-202ENST00000367740 DOCK1Q14185 1865 aa18.66■□□□□ 0.58
VAMP4-202ENST00000367740 MAST2Q6P0Q8 1798 aa18.65■□□□□ 0.58
VAMP4-202ENST00000367740 HMGCRP04035 888 aa18.65■□□□□ 0.58
VAMP4-202ENST00000367740 COL9A1P20849 921 aa18.65■□□□□ 0.58
VAMP4-202ENST00000367740 WDR43Q15061 677 aaKnown RBP eCLIP18.65■□□□□ 0.58
VAMP4-202ENST00000367740 RALBP1Q15311 655 aa18.65■□□□□ 0.58
VAMP4-202ENST00000367740 CALD1Q05682 793 aaKnown RBP18.64■□□□□ 0.57
VAMP4-202ENST00000367740 TRIM32Q13049 653 aa18.64■□□□□ 0.57
VAMP4-202ENST00000367740 EPHA10Q5JZY3 1008 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms