RNA–Protein interactions for RNA: ENST00000367482.8

PRG4-201, Transcript of proteoglycan 4, humanhuman

TSL 5

Gene PRG4, Length 2,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRG4-201ENST00000367482 CCDC38Q502W7 563 aa12.56□□□□□ -0.4
PRG4-201ENST00000367482 RNF187Q5TA31 235 aaPredicted RBP12.56□□□□□ -0.4
PRG4-201ENST00000367482 DNAAF2Q9NVR5 837 aaKnown RBP12.56□□□□□ -0.4
PRG4-201ENST00000367482 PUF60Q9UHX1 559 aaKnown RBP12.56□□□□□ -0.4
PRG4-201ENST00000367482 C15orf41Q9Y2V0 281 aa12.56□□□□□ -0.4
PRG4-201ENST00000367482 ATP6V1G1O75348 118 aa12.55□□□□□ -0.4
PRG4-201ENST00000367482 LINGO3P0C6S8 592 aa12.55□□□□□ -0.4
PRG4-201ENST00000367482 RUFY3Q7L099 469 aa12.55□□□□□ -0.4
PRG4-201ENST00000367482 TAX1BP1Q86VP1 789 aa12.55□□□□□ -0.4
PRG4-201ENST00000367482 APLFQ8IW19 511 aaPredicted RBP12.55□□□□□ -0.4
PRG4-201ENST00000367482 COG1Q8WTW3 980 aa12.55□□□□□ -0.4
PRG4-201ENST00000367482 TSPYL2Q9H2G4 693 aaPredicted RBP12.55□□□□□ -0.4
PRG4-201ENST00000367482 ZNF518AQ6AHZ1 1483 aa12.55□□□□□ -0.4
PRG4-201ENST00000367482 A6NHS1 94 aa12.55□□□□□ -0.4
PRG4-201ENST00000367482 RHOXF2BP0C7M4 288 aa12.55□□□□□ -0.4
PRG4-201ENST00000367482 HSPA4P34932 840 aa12.55□□□□□ -0.4
PRG4-201ENST00000367482 GGCXP38435 758 aa12.55□□□□□ -0.4
PRG4-201ENST00000367482 AK2P54819 239 aa12.55□□□□□ -0.4
PRG4-201ENST00000367482 RHOXF2Q9BQY4 288 aa12.55□□□□□ -0.4
PRG4-201ENST00000367482 BUB1BO60566 1050 aaPredicted RBP12.54□□□□□ -0.4
PRG4-201ENST00000367482 ZNF24P17028 368 aa12.54□□□□□ -0.4
PRG4-201ENST00000367482 BLMHQ13867 455 aa12.54□□□□□ -0.4
PRG4-201ENST00000367482 CRELD2Q6UXH1 353 aaPredicted RBP12.54□□□□□ -0.4
PRG4-201ENST00000367482 CUL5Q93034 780 aa12.54□□□□□ -0.4
PRG4-201ENST00000367482 BPIFA3Q9BQP9 254 aa12.54□□□□□ -0.4
PRG4-201ENST00000367482 RABEP2Q9H5N1 569 aa12.54□□□□□ -0.4
PRG4-201ENST00000367482 ZNF777Q9ULD5 760 aaPredicted RBP12.54□□□□□ -0.4
PRG4-201ENST00000367482 MAGEA10P43363 369 aaPredicted RBP12.54□□□□□ -0.4
PRG4-201ENST00000367482 CCDC15Q0P6D6 951 aa12.54□□□□□ -0.4
PRG4-201ENST00000367482 PGBD1Q96JS3 809 aa12.54□□□□□ -0.4
PRG4-201ENST00000367482 FMNL2Q96PY5 1086 aa12.54□□□□□ -0.4
PRG4-201ENST00000367482 ARPC5LQ9BPX5 153 aa12.54□□□□□ -0.4
PRG4-201ENST00000367482 RIPOR2Q9Y4F9 1068 aa12.54□□□□□ -0.4
PRG4-201ENST00000367482 NAT1P18440 290 aa12.53□□□□□ -0.4
PRG4-201ENST00000367482 MYO1EQ12965 1108 aa12.53□□□□□ -0.4
PRG4-201ENST00000367482 SH2B1Q9NRF2 756 aaPredicted RBP12.53□□□□□ -0.4
PRG4-201ENST00000367482 TUBGCP6Q96RT7 1819 aa12.53□□□□□ -0.4
PRG4-201ENST00000367482 CTAGE15A4D2H0 777 aa12.53□□□□□ -0.4
PRG4-201ENST00000367482 GOLGA8KD6RF30 607 aa12.53□□□□□ -0.4
PRG4-201ENST00000367482 CTAGE8P0CG41 777 aa12.53□□□□□ -0.4
PRG4-201ENST00000367482 PDCP20941 246 aa12.53□□□□□ -0.4
PRG4-201ENST00000367482 SFMBT2Q5VUG0 894 aa12.53□□□□□ -0.4
PRG4-201ENST00000367482 CTAGE6Q86UF2 777 aa12.53□□□□□ -0.4
PRG4-201ENST00000367482 FAM114A1Q8IWE2 563 aa12.53□□□□□ -0.4
PRG4-201ENST00000367482 CTAGE4Q8IX94 777 aa12.53□□□□□ -0.4
PRG4-201ENST00000367482 RIN2Q8WYP3 895 aaPredicted RBP12.53□□□□□ -0.4
PRG4-201ENST00000367482 ZSCAN31Q96LW9 406 aaPredicted RBP12.53□□□□□ -0.4
PRG4-201ENST00000367482 PHACTR1Q9C0D0 580 aa12.53□□□□□ -0.4
PRG4-201ENST00000367482 GIGYF1O75420 1035 aaPredicted RBP12.52□□□□□ -0.4
PRG4-201ENST00000367482 LUC7L3O95232 432 aaKnown RBP12.52□□□□□ -0.4
PRG4-201ENST00000367482 SSBP05455 408 aaKnown RBP eCLIP12.52□□□□□ -0.4
PRG4-201ENST00000367482 GJA8P48165 433 aa12.52□□□□□ -0.4
PRG4-201ENST00000367482 SCNN1BP51168 640 aa12.52□□□□□ -0.4
PRG4-201ENST00000367482 PIP4K2BP78356 416 aa12.52□□□□□ -0.4
PRG4-201ENST00000367482 TMED1Q13445 227 aa12.52□□□□□ -0.4
PRG4-201ENST00000367482 NAA35Q5VZE5 725 aa12.52□□□□□ -0.4
PRG4-201ENST00000367482 ANKRD44Q8N8A2 993 aa12.52□□□□□ -0.4
PRG4-201ENST00000367482 CCHCR1Q8TD31 782 aa12.52□□□□□ -0.4
PRG4-201ENST00000367482 CFAP53Q96M91 514 aa12.52□□□□□ -0.4
PRG4-201ENST00000367482 JAKMIP1Q96N16 626 aaKnown RBP12.52□□□□□ -0.4
PRG4-201ENST00000367482 NUP58Q9BVL2 599 aa12.52□□□□□ -0.4
PRG4-201ENST00000367482 MYO1AQ9UBC5 1043 aa12.52□□□□□ -0.4
PRG4-201ENST00000367482 XRCC4Q13426 336 aa12.52□□□□□ -0.41
PRG4-201ENST00000367482 AKNAD1Q5T1N1 836 aa12.52□□□□□ -0.41
PRG4-201ENST00000367482 TMEM139Q8IV31 216 aa12.52□□□□□ -0.41
PRG4-201ENST00000367482 CCAR1Q8IX12 1150 aaKnown RBP12.52□□□□□ -0.41
PRG4-201ENST00000367482 INCENPQ9NQS7 918 aa12.52□□□□□ -0.41
PRG4-201ENST00000367482 AGPSO00116 658 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 CREB3O43889 395 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 PFKFB2O60825 505 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 HMMRO75330 724 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 KIF4AO95239 1232 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 ATP4AP20648 1035 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 MKRN4PQ13434 485 aaPredicted RBP12.51□□□□□ -0.41
PRG4-201ENST00000367482 MYBPC3Q14896 1274 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 ME3Q16798 604 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 WHAMMP3Q1A5X7 153 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 GNPTABQ3T906 1256 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 CCDC121Q6ZUS5 278 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 CCDC83Q8IWF9 413 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 UBA5Q9GZZ9 404 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 NOD2Q9HC29 1040 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 ZFATQ9P243 1243 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 CDK13Q14004 1512 aaKnown RBP12.51□□□□□ -0.41
PRG4-201ENST00000367482 SYNJ2O15056 1496 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 KIF3BO15066 747 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 SMIM24O75264 130 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 SASH1O94885 1247 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 PDE1AP54750 535 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 DYNC1I2Q13409 638 aaKnown RBP12.51□□□□□ -0.41
PRG4-201ENST00000367482 LARP1BQ659C4 914 aaKnown RBP12.51□□□□□ -0.41
PRG4-201ENST00000367482 C6orf89Q6UWU4 347 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 EXOC8Q8IYI6 725 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 STAMBPL1Q96FJ0 436 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 HAUS2Q9NVX0 235 aa12.51□□□□□ -0.41
PRG4-201ENST00000367482 ATP10DQ9P241 1426 aa12.5□□□□□ -0.41
PRG4-201ENST00000367482 TRAPPC8Q9Y2L5 1435 aa12.5□□□□□ -0.41
PRG4-201ENST00000367482 M0R2C6 588 aa12.5□□□□□ -0.41
PRG4-201ENST00000367482 ATP6V1G2O95670 118 aa12.5□□□□□ -0.41
PRG4-201ENST00000367482 MPP3Q13368 585 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms