RNA–Protein interactions for RNA: ENST00000367482.8

PRG4-201, Transcript of proteoglycan 4, humanhuman

TSL 5

Gene PRG4, Length 2,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRG4-201ENST00000367482 PELP1Q8IZL8 1130 aaKnown RBP19.89■□□□□ 0.77
PRG4-201ENST00000367482 MYT1Q01538 1121 aa19.49■□□□□ 0.71
PRG4-201ENST00000367482 HRCP23327 699 aa18.91■□□□□ 0.62
PRG4-201ENST00000367482 TTBK1Q5TCY1 1321 aaPredicted RBP18.65■□□□□ 0.58
PRG4-201ENST00000367482 SCAF1Q9H7N4 1312 aaKnown RBP18.34■□□□□ 0.53
PRG4-201ENST00000367482 PPARGC1BQ86YN6 1023 aaKnown RBP18.24■□□□□ 0.51
PRG4-201ENST00000367482 NISCHQ9Y2I1 1504 aa17.92■□□□□ 0.46
PRG4-201ENST00000367482 PRKCSHP14314 528 aaPredicted RBP17.91■□□□□ 0.46
PRG4-201ENST00000367482 PCGF6Q9BYE7 350 aa17.88■□□□□ 0.45
PRG4-201ENST00000367482 BCL11AQ9H165 835 aa17.83■□□□□ 0.44
PRG4-201ENST00000367482 ACIN1Q9UKV3 1341 aaKnown RBP17.67■□□□□ 0.42
PRG4-201ENST00000367482 ERICH6Q7L0X2 663 aa17.66■□□□□ 0.42
PRG4-201ENST00000367482 CENPBP07199 599 aaPredicted RBP17.62■□□□□ 0.41
PRG4-201ENST00000367482 FAM9AQ8IZU1 332 aaPredicted RBP17.61■□□□□ 0.41
PRG4-201ENST00000367482 ZEB1P37275 1124 aaPredicted RBP17.53■□□□□ 0.4
PRG4-201ENST00000367482 MYO15BQ96JP2 1530 aa17.53■□□□□ 0.4
PRG4-201ENST00000367482 APLP2Q06481 763 aa17.52■□□□□ 0.4
PRG4-201ENST00000367482 GTF3C3Q9Y5Q9 886 aa17.49■□□□□ 0.39
PRG4-201ENST00000367482 NEUROD1Q13562 356 aa17.48■□□□□ 0.39
PRG4-201ENST00000367482 DCAF1Q9Y4B6 1507 aa17.38■□□□□ 0.37
PRG4-201ENST00000367482 CCDC180Q9P1Z9 1646 aa17.35■□□□□ 0.37
PRG4-201ENST00000367482 ANP32EQ9BTT0 268 aa17.23■□□□□ 0.35
PRG4-201ENST00000367482 TRIM26Q12899 539 aaPredicted RBP17.21■□□□□ 0.35
PRG4-201ENST00000367482 CSRNP3Q8WYN3 585 aa16.98■□□□□ 0.31
PRG4-201ENST00000367482 CHIC1Q5VXU3 224 aa16.94■□□□□ 0.3
PRG4-201ENST00000367482 SLC24A1O60721 1099 aa16.81■□□□□ 0.28
PRG4-201ENST00000367482 DIEXFQ68CQ4 756 aaKnown RBP16.79■□□□□ 0.28
PRG4-201ENST00000367482 SUPT5HO00267 1087 aaKnown RBP16.72■□□□□ 0.27
PRG4-201ENST00000367482 CLSPNQ9HAW4 1339 aa16.67■□□□□ 0.26
PRG4-201ENST00000367482 TSHZ2Q9NRE2 1034 aa16.66■□□□□ 0.26
PRG4-201ENST00000367482 UBE2Q2Q8WVN8 375 aa16.53■□□□□ 0.24
PRG4-201ENST00000367482 ANO8Q9HCE9 1232 aaPredicted RBP16.52■□□□□ 0.24
PRG4-201ENST00000367482 LOC105371045A0A1W2PR82 267 aa16.49■□□□□ 0.23
PRG4-201ENST00000367482 TRIM41Q8WV44 630 aa16.49■□□□□ 0.23
PRG4-201ENST00000367482 YTHDC1Q96MU7 727 aaKnown RBP16.48■□□□□ 0.23
PRG4-201ENST00000367482 SUPT16HQ9Y5B9 1047 aaKnown RBP16.47■□□□□ 0.23
PRG4-201ENST00000367482 EIF5BO60841 1220 aaKnown RBP16.45■□□□□ 0.22
PRG4-201ENST00000367482 DAXXQ9UER7 740 aaPredicted RBP16.43■□□□□ 0.22
PRG4-201ENST00000367482 MYT1LQ9UL68 1186 aa16.38■□□□□ 0.21
PRG4-201ENST00000367482 SHROOM4Q9ULL8 1493 aa16.37■□□□□ 0.21
PRG4-201ENST00000367482 ERICH6BQ5W0A0 696 aa16.32■□□□□ 0.2
PRG4-201ENST00000367482 CCER1Q8TC90 406 aaPredicted RBP16.29■□□□□ 0.2
PRG4-201ENST00000367482 ZNF316A6NFI3 1004 aaPredicted RBP16.28■□□□□ 0.2
PRG4-201ENST00000367482 SALL2Q9Y467 1007 aaPredicted RBP16.23■□□□□ 0.19
PRG4-201ENST00000367482 MIER1Q8N108 512 aa16.22■□□□□ 0.19
PRG4-201ENST00000367482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.21■□□□□ 0.19
PRG4-201ENST00000367482 RBM19Q9Y4C8 960 aaKnown RBP16.16■□□□□ 0.18
PRG4-201ENST00000367482 DEKP35659 375 aaKnown RBP16.14■□□□□ 0.17
PRG4-201ENST00000367482 PKNOX2Q96KN3 472 aa16.1■□□□□ 0.17
PRG4-201ENST00000367482 MSH5O43196 834 aa16.09■□□□□ 0.17
PRG4-201ENST00000367482 CCDC136Q96JN2 1154 aa16.09■□□□□ 0.17
PRG4-201ENST00000367482 FANCIQ9NVI1 1328 aa16.01■□□□□ 0.15
PRG4-201ENST00000367482 PLEKHG5O94827 1062 aa15.99■□□□□ 0.15
PRG4-201ENST00000367482 PODXL2Q9NZ53 605 aa15.94■□□□□ 0.14
PRG4-201ENST00000367482 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.87■□□□□ 0.13
PRG4-201ENST00000367482 BCANQ96GW7 911 aa15.81■□□□□ 0.12
PRG4-201ENST00000367482 FKBP8Q14318 412 aa15.76■□□□□ 0.11
PRG4-201ENST00000367482 IL27Q8NEV9 243 aa15.75■□□□□ 0.11
PRG4-201ENST00000367482 NEFLP07196 543 aa15.67■□□□□ 0.1
PRG4-201ENST00000367482 RTN4Q9NQC3 1192 aaKnown RBP15.66■□□□□ 0.1
PRG4-201ENST00000367482 GLIPR1L2Q4G1C9 344 aa15.63■□□□□ 0.09
PRG4-201ENST00000367482 CDK11AQ9UQ88 783 aaPredicted RBP15.59■□□□□ 0.09
PRG4-201ENST00000367482 ITGAEP38570 1179 aa15.58■□□□□ 0.08
PRG4-201ENST00000367482 NBR1Q14596 966 aa15.56■□□□□ 0.08
PRG4-201ENST00000367482 NOP58Q9Y2X3 529 aaKnown RBP15.56■□□□□ 0.08
PRG4-201ENST00000367482 RTL5Q5HYW3 569 aaPredicted RBP15.56■□□□□ 0.08
PRG4-201ENST00000367482 C11orf95C9JLR9 678 aaPredicted RBP15.54■□□□□ 0.08
PRG4-201ENST00000367482 ZMYND15Q9H091 742 aa15.52■□□□□ 0.07
PRG4-201ENST00000367482 RSPH6AQ9H0K4 717 aa15.49■□□□□ 0.07
PRG4-201ENST00000367482 ZCCHC6Q5VYS8 1495 aaKnown RBP15.45■□□□□ 0.06
PRG4-201ENST00000367482 VSIG10Q8N0Z9 540 aa15.42■□□□□ 0.06
PRG4-201ENST00000367482 WRNQ14191 1432 aaPredicted RBP eCLIP15.41■□□□□ 0.06
PRG4-201ENST00000367482 WASHC2AQ641Q2 1341 aa15.41■□□□□ 0.06
PRG4-201ENST00000367482 PAK3O75914 559 aaPredicted RBP15.39■□□□□ 0.05
PRG4-201ENST00000367482 WASHC2CQ9Y4E1 1318 aa15.39■□□□□ 0.05
PRG4-201ENST00000367482 TIMELESSQ9UNS1 1208 aa15.35■□□□□ 0.05
PRG4-201ENST00000367482 PDE4CQ08493 712 aa15.34■□□□□ 0.05
PRG4-201ENST00000367482 FGD1P98174 961 aa15.33■□□□□ 0.04
PRG4-201ENST00000367482 KCNH8Q96L42 1107 aa15.31■□□□□ 0.04
PRG4-201ENST00000367482 USP35Q9P2H5 1018 aa15.31■□□□□ 0.04
PRG4-201ENST00000367482 AAMPQ13685 434 aa15.28■□□□□ 0.04
PRG4-201ENST00000367482 PDIA4P13667 645 aaKnown RBP15.26■□□□□ 0.03
PRG4-201ENST00000367482 IPO9Q96P70 1041 aaKnown RBP15.25■□□□□ 0.03
PRG4-201ENST00000367482 BRPF3Q9ULD4 1205 aa15.25■□□□□ 0.03
PRG4-201ENST00000367482 RBM10P98175 930 aaKnown RBP15.24■□□□□ 0.03
PRG4-201ENST00000367482 EHMT2Q96KQ7 1210 aa15.24■□□□□ 0.03
PRG4-201ENST00000367482 A0A0U1RQG5 324 aaPredicted RBP15.24■□□□□ 0.03
PRG4-201ENST00000367482 ZBTB47Q9UFB7 747 aaPredicted RBP15.22■□□□□ 0.03
PRG4-201ENST00000367482 ANP32AP39687 249 aaKnown RBP15.21■□□□□ 0.03
PRG4-201ENST00000367482 FAM43AQ8N2R8 423 aa15.21■□□□□ 0.03
PRG4-201ENST00000367482 NEFMP07197 916 aa15.18■□□□□ 0.02
PRG4-201ENST00000367482 PPP4R2Q9NY27 417 aa15.18■□□□□ 0.02
PRG4-201ENST00000367482 RRP9O43818 475 aaKnown RBP15.15■□□□□ 0.02
PRG4-201ENST00000367482 CCER2I3L3R5 266 aa15.12■□□□□ 0.01
PRG4-201ENST00000367482 HSP90AA2PQ14568 343 aaPredicted RBP15.11■□□□□ 0.01
PRG4-201ENST00000367482 TRIM52Q96A61 297 aa15.1■□□□□ 0.01
PRG4-201ENST00000367482 BCL11BQ9C0K0 894 aaPredicted RBP15.09■□□□□ 0.01
PRG4-201ENST00000367482 GSE1Q14687 1217 aa15.09■□□□□ 0.01
PRG4-201ENST00000367482 PPM1GO15355 546 aaPredicted RBP15.07■□□□□ 0
PRG4-201ENST00000367482 HNRNPUL2Q1KMD3 747 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms