RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 ZNF423Q2M1K9 1284 aa3.65□□□□□ -1.83
MIR539-201ENST00000365690 XKR5Q6UX68 686 aa3.65□□□□□ -1.83
MIR539-201ENST00000365690 NUDT16Q96DE0 195 aaKnown RBP3.65□□□□□ -1.83
MIR539-201ENST00000365690 GGNBP2Q9H3C7 697 aa3.65□□□□□ -1.83
MIR539-201ENST00000365690 MKNK2Q9HBH9 465 aa3.65□□□□□ -1.83
MIR539-201ENST00000365690 PARD6AQ9NPB6 346 aa3.65□□□□□ -1.83
MIR539-201ENST00000365690 A6NHS1 94 aa3.64□□□□□ -1.83
MIR539-201ENST00000365690 METTL12A8MUP2 240 aa3.64□□□□□ -1.83
MIR539-201ENST00000365690 PEAR1Q5VY43 1037 aaPredicted RBP3.64□□□□□ -1.83
MIR539-201ENST00000365690 ATG14Q6ZNE5 492 aa3.64□□□□□ -1.83
MIR539-201ENST00000365690 FAM214BQ7L5A3 538 aa3.64□□□□□ -1.83
MIR539-201ENST00000365690 ZNF438Q7Z4V0 828 aa3.64□□□□□ -1.83
MIR539-201ENST00000365690 ATCAYQ86WG3 371 aa3.64□□□□□ -1.83
MIR539-201ENST00000365690 WWC1Q8IX03 1113 aa3.64□□□□□ -1.83
MIR539-201ENST00000365690 FBXO15Q8NCQ5 510 aaPredicted RBP3.64□□□□□ -1.83
MIR539-201ENST00000365690 TRIM56Q9BRZ2 755 aaKnown RBP3.64□□□□□ -1.83
MIR539-201ENST00000365690 LATS2Q9NRM7 1088 aa3.64□□□□□ -1.83
MIR539-201ENST00000365690 AP4E1Q9UPM8 1137 aa3.64□□□□□ -1.83
MIR539-201ENST00000365690 TMEM265A0A087WTH1 108 aa3.63□□□□□ -1.83
MIR539-201ENST00000365690 EREGO14944 169 aa3.63□□□□□ -1.83
MIR539-201ENST00000365690 PRMT3O60678 531 aa3.63□□□□□ -1.83
MIR539-201ENST00000365690 NAA30Q147X3 362 aaPredicted RBP3.63□□□□□ -1.83
MIR539-201ENST00000365690 SKOR2Q2VWA4 1001 aaPredicted RBP3.63□□□□□ -1.83
MIR539-201ENST00000365690 HEXIM2Q96MH2 286 aaKnown RBP3.63□□□□□ -1.83
MIR539-201ENST00000365690 DIRC2Q96SL1 478 aa3.63□□□□□ -1.83
MIR539-201ENST00000365690 WDR18Q9BV38 432 aa3.63□□□□□ -1.83
MIR539-201ENST00000365690 PPP1R12CQ9BZL4 782 aa3.63□□□□□ -1.83
MIR539-201ENST00000365690 NSUN3Q9H649 340 aaKnown RBP3.63□□□□□ -1.83
MIR539-201ENST00000365690 SMG5Q9UPR3 1016 aaKnown RBP3.63□□□□□ -1.83
MIR539-201ENST00000365690 ADAMTS20P59510 1910 aa3.62□□□□□ -1.83
MIR539-201ENST00000365690 ETV2O00321 342 aaPredicted RBP3.62□□□□□ -1.83
MIR539-201ENST00000365690 AOC2O75106 756 aa3.62□□□□□ -1.83
MIR539-201ENST00000365690 AFMP43652 599 aa3.62□□□□□ -1.83
MIR539-201ENST00000365690 ZP2Q05996 745 aa3.62□□□□□ -1.83
MIR539-201ENST00000365690 FAM69CQ0P6D2 419 aa3.62□□□□□ -1.83
MIR539-201ENST00000365690 POU4F3Q15319 338 aa3.62□□□□□ -1.83
MIR539-201ENST00000365690 CIAPIN1Q6FI81 312 aa3.62□□□□□ -1.83
MIR539-201ENST00000365690 MPZL3Q6UWV2 235 aa3.62□□□□□ -1.83
MIR539-201ENST00000365690 ASAP3Q8TDY4 903 aa3.62□□□□□ -1.83
MIR539-201ENST00000365690 GLMNQ92990 594 aa3.62□□□□□ -1.83
MIR539-201ENST00000365690 KIRREL1Q96J84 757 aa3.62□□□□□ -1.83
MIR539-201ENST00000365690 DUSP23Q9BVJ7 150 aa3.62□□□□□ -1.83
MIR539-201ENST00000365690 VRTNQ9H8Y1 702 aa3.62□□□□□ -1.83
MIR539-201ENST00000365690 STIM2Q9P246 746 aa3.62□□□□□ -1.83
MIR539-201ENST00000365690 TMPRSS2O15393 492 aa3.61□□□□□ -1.83
MIR539-201ENST00000365690 TMEM253P0C7T8 217 aa3.61□□□□□ -1.83
MIR539-201ENST00000365690 GLDCP23378 1020 aa3.61□□□□□ -1.83
MIR539-201ENST00000365690 LINC00310P59036 64 aa3.61□□□□□ -1.83
MIR539-201ENST00000365690 TMEM67Q5HYA8 995 aa3.61□□□□□ -1.83
MIR539-201ENST00000365690 FAM200AQ8TCP9 573 aa3.61□□□□□ -1.83
MIR539-201ENST00000365690 KCNC2Q96PR1 638 aa3.61□□□□□ -1.83
MIR539-201ENST00000365690 MKNK1Q9BUB5 465 aa3.61□□□□□ -1.83
MIR539-201ENST00000365690 TMPRSS5Q9H3S3 457 aa3.61□□□□□ -1.83
MIR539-201ENST00000365690 PSPNO60542 156 aa3.6□□□□□ -1.83
MIR539-201ENST00000365690 ITIH2P19823 946 aa3.6□□□□□ -1.83
MIR539-201ENST00000365690 PCDH1Q08174 1060 aa3.6□□□□□ -1.83
MIR539-201ENST00000365690 IKZF1Q13422 519 aa3.6□□□□□ -1.83
MIR539-201ENST00000365690 CYFIP1Q7L576 1253 aa3.6□□□□□ -1.83
MIR539-201ENST00000365690 SPACA3Q8IXA5 215 aa3.6□□□□□ -1.83
MIR539-201ENST00000365690 WDR89Q96FK6 387 aaPredicted RBP3.6□□□□□ -1.83
MIR539-201ENST00000365690 IRF2BPLQ9H1B7 796 aa3.6□□□□□ -1.83
MIR539-201ENST00000365690 RAD18Q9NS91 495 aa3.6□□□□□ -1.83
MIR539-201ENST00000365690 SNX11Q9Y5W9 270 aa3.6□□□□□ -1.83
MIR539-201ENST00000365690 NUAK1O60285 661 aa3.59□□□□□ -1.83
MIR539-201ENST00000365690 CYP11A1P05108 521 aa3.59□□□□□ -1.83
MIR539-201ENST00000365690 SYN1P17600 705 aa3.59□□□□□ -1.83
MIR539-201ENST00000365690 BMP7P18075 431 aa3.59□□□□□ -1.83
MIR539-201ENST00000365690 LMOD1P29536 600 aaPredicted RBP3.59□□□□□ -1.83
MIR539-201ENST00000365690 NKPD1Q17RQ9 610 aa3.59□□□□□ -1.83
MIR539-201ENST00000365690 SPRED3Q2MJR0 410 aa3.59□□□□□ -1.83
MIR539-201ENST00000365690 DISC1Q9NRI5 854 aa3.59□□□□□ -1.83
MIR539-201ENST00000365690 PCDHGC5Q9Y5F6 944 aa3.59□□□□□ -1.83
MIR539-201ENST00000365690 SYNGAP1Q96PV0 1343 aa3.59□□□□□ -1.83
MIR539-201ENST00000365690 TCAF2A6NFQ2 919 aa3.58□□□□□ -1.84
MIR539-201ENST00000365690 GRIA4P48058 902 aa3.58□□□□□ -1.84
MIR539-201ENST00000365690 FNBP4Q8N3X1 1017 aaPredicted RBP3.58□□□□□ -1.84
MIR539-201ENST00000365690 EDEM1Q92611 657 aa3.58□□□□□ -1.84
MIR539-201ENST00000365690 PMEPA1Q969W9 287 aa3.58□□□□□ -1.84
MIR539-201ENST00000365690 FANCD2OSQ96PS1 177 aa3.58□□□□□ -1.84
MIR539-201ENST00000365690 A0A096LPE4 126 aa3.57□□□□□ -1.84
MIR539-201ENST00000365690 A0A1W2PPZ6 126 aa3.57□□□□□ -1.84
MIR539-201ENST00000365690 RAD21O60216 631 aa3.57□□□□□ -1.84
MIR539-201ENST00000365690 TRIM13O60858 407 aa3.57□□□□□ -1.84
MIR539-201ENST00000365690 PDGFAP04085 211 aa3.57□□□□□ -1.84
MIR539-201ENST00000365690 NEFMP07197 916 aa3.57□□□□□ -1.84
MIR539-201ENST00000365690 LIG1P18858 919 aa3.57□□□□□ -1.84
MIR539-201ENST00000365690 NFIXQ14938 502 aa3.57□□□□□ -1.84
MIR539-201ENST00000365690 SWI5Q1ZZU3 235 aa3.57□□□□□ -1.84
MIR539-201ENST00000365690 PRRT2Q7Z6L0 340 aaPredicted RBP3.57□□□□□ -1.84
MIR539-201ENST00000365690 SMYD4Q8IYR2 804 aaPredicted RBP3.57□□□□□ -1.84
MIR539-201ENST00000365690 ABTB2Q8N961 1025 aa3.57□□□□□ -1.84
MIR539-201ENST00000365690 CXorf38Q8TB03 319 aa3.57□□□□□ -1.84
MIR539-201ENST00000365690 ASB11Q8WXH4 323 aa3.57□□□□□ -1.84
MIR539-201ENST00000365690 TCF12Q99081 682 aa3.57□□□□□ -1.84
MIR539-201ENST00000365690 CLEC4MQ9H2X3 399 aaPredicted RBP3.57□□□□□ -1.84
MIR539-201ENST00000365690 ZCCHC4Q9H5U6 513 aa3.57□□□□□ -1.84
MIR539-201ENST00000365690 DCP1AQ9NPI6 582 aaPredicted RBP3.57□□□□□ -1.84
MIR539-201ENST00000365690 RTEL1Q9NZ71 1219 aa3.57□□□□□ -1.84
MIR539-201ENST00000365690 CXXC1Q9P0U4 656 aaPredicted RBP3.57□□□□□ -1.84
MIR539-201ENST00000365690 ACIN1Q9UKV3 1341 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms