RNA–Protein interactions for RNA: ENST00000361987.5

CNTF-201, Transcript of ciliary neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTF, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTF-201ENST00000361987 VEZTQ9HBM0 779 aa15.22■□□□□ 0.03
CNTF-201ENST00000361987 GGA3Q9NZ52 723 aa15.22■□□□□ 0.03
CNTF-201ENST00000361987 SCAF8Q9UPN6 1271 aaKnown RBP15.22■□□□□ 0.03
CNTF-201ENST00000361987 MYH2Q9UKX2 1941 aa15.21■□□□□ 0.03
CNTF-201ENST00000361987 GPR75-ASB3A0A0A6YYF3 556 aa15.21■□□□□ 0.03
CNTF-201ENST00000361987 BAG3O95817 575 aa15.21■□□□□ 0.03
CNTF-201ENST00000361987 USP40Q9NVE5 1235 aa15.21■□□□□ 0.03
CNTF-201ENST00000361987 TCRBV5S4A2TA0A5A2 114 aa15.2■□□□□ 0.02
CNTF-201ENST00000361987 RNF113AO15541 343 aaKnown RBP15.2■□□□□ 0.02
CNTF-201ENST00000361987 CACNB3P54284 484 aa15.2■□□□□ 0.02
CNTF-201ENST00000361987 UBE3CQ15386 1083 aa15.2■□□□□ 0.02
CNTF-201ENST00000361987 MAP1SQ66K74 1059 aaPredicted RBP15.2■□□□□ 0.02
CNTF-201ENST00000361987 CDC42EP5Q6NZY7 148 aa15.2■□□□□ 0.02
CNTF-201ENST00000361987 TMED8Q6PL24 325 aaPredicted RBP15.2■□□□□ 0.02
CNTF-201ENST00000361987 ZNF70Q9UC06 446 aaPredicted RBP15.2■□□□□ 0.02
CNTF-201ENST00000361987 TOMM70O94826 608 aa15.2■□□□□ 0.02
CNTF-201ENST00000361987 ZFYP08048 801 aaPredicted RBP15.2■□□□□ 0.02
CNTF-201ENST00000361987 SDSP20132 328 aa15.2■□□□□ 0.02
CNTF-201ENST00000361987 TMOD2Q9NZR1 351 aa15.2■□□□□ 0.02
CNTF-201ENST00000361987 PGAP2Q9UHJ9 254 aa15.2■□□□□ 0.02
CNTF-201ENST00000361987 TCP10L2B9ZVM9 353 aa15.19■□□□□ 0.02
CNTF-201ENST00000361987 DYNLL1P63167 89 aaKnown RBP15.19■□□□□ 0.02
CNTF-201ENST00000361987 SPDYE2Q495Y8 402 aa15.19■□□□□ 0.02
CNTF-201ENST00000361987 KRT26Q7Z3Y9 468 aa15.19■□□□□ 0.02
CNTF-201ENST00000361987 SULF1Q8IWU6 871 aa15.19■□□□□ 0.02
CNTF-201ENST00000361987 ADAMTSL1Q8N6G6 1762 aa15.19■□□□□ 0.02
CNTF-201ENST00000361987 MAGEB6P1A0A0J9YX57 407 aa15.18■□□□□ 0.02
CNTF-201ENST00000361987 CHADLQ6NUI6 762 aa15.18■□□□□ 0.02
CNTF-201ENST00000361987 PUS7LQ9H0K6 701 aaKnown RBP15.18■□□□□ 0.02
CNTF-201ENST00000361987 DOCK2Q92608 1830 aa15.18■□□□□ 0.02
CNTF-201ENST00000361987 PLCG2P16885 1265 aa15.18■□□□□ 0.02
CNTF-201ENST00000361987 RHBDL3P58872 404 aa15.18■□□□□ 0.02
CNTF-201ENST00000361987 PPP4CP60510 307 aa15.18■□□□□ 0.02
CNTF-201ENST00000361987 USP48Q86UV5 1035 aa15.18■□□□□ 0.02
CNTF-201ENST00000361987 SMC1BQ8NDV3 1235 aa15.18■□□□□ 0.02
CNTF-201ENST00000361987 SH3RF3Q8TEJ3 882 aaPredicted RBP15.18■□□□□ 0.02
CNTF-201ENST00000361987 TCP10Q12799 353 aa15.17■□□□□ 0.02
CNTF-201ENST00000361987 CDC37L1Q7L3B6 337 aa15.17■□□□□ 0.02
CNTF-201ENST00000361987 APOBEC3FQ8IUX4 373 aaKnown RBP15.17■□□□□ 0.02
CNTF-201ENST00000361987 APPBP2Q92624 585 aa15.17■□□□□ 0.02
CNTF-201ENST00000361987 OSBP2Q969R2 916 aa15.17■□□□□ 0.02
CNTF-201ENST00000361987 AIDAQ96BJ3 306 aa15.17■□□□□ 0.02
CNTF-201ENST00000361987 GLIS2Q9BZE0 524 aaPredicted RBP15.17■□□□□ 0.02
CNTF-201ENST00000361987 PITPNM2Q9BZ72 1349 aa15.17■□□□□ 0.02
CNTF-201ENST00000361987 POLR2AP24928 1970 aaKnown RBP15.17■□□□□ 0.02
CNTF-201ENST00000361987 NFIAQ12857 509 aa15.16■□□□□ 0.02
CNTF-201ENST00000361987 PICALMQ13492 652 aa15.16■□□□□ 0.02
CNTF-201ENST00000361987 TNFAIP1Q13829 316 aa15.16■□□□□ 0.02
CNTF-201ENST00000361987 BMP2KLQ5H9B9 411 aa15.16■□□□□ 0.02
CNTF-201ENST00000361987 DLK2Q6UY11 383 aa15.16■□□□□ 0.02
CNTF-201ENST00000361987 TEX11Q8IYF3 940 aa15.16■□□□□ 0.02
CNTF-201ENST00000361987 RIOK1Q9BRS2 568 aaKnown RBP15.16■□□□□ 0.02
CNTF-201ENST00000361987 DEFB129Q9H1M3 183 aa15.16■□□□□ 0.02
CNTF-201ENST00000361987 ARMT1Q9H993 441 aa15.16■□□□□ 0.02
CNTF-201ENST00000361987 ADM5C9JUS6 153 aa15.16■□□□□ 0.02
CNTF-201ENST00000361987 MBD4O95243 580 aa15.16■□□□□ 0.02
CNTF-201ENST00000361987 PRAMEF18Q5VWM3 479 aa15.16■□□□□ 0.02
CNTF-201ENST00000361987 CERS3Q8IU89 383 aa15.16■□□□□ 0.02
CNTF-201ENST00000361987 LCORLQ8N3X6 602 aa15.16■□□□□ 0.02
CNTF-201ENST00000361987 RBM46Q8TBY0 533 aaKnown RBP15.16■□□□□ 0.02
CNTF-201ENST00000361987 TGFBRAP1Q8WUH2 860 aa15.16■□□□□ 0.02
CNTF-201ENST00000361987 FAM227BQ96M60 508 aa15.16■□□□□ 0.02
CNTF-201ENST00000361987 SEC62Q99442 399 aaKnown RBP15.16■□□□□ 0.02
CNTF-201ENST00000361987 DIAPH3Q9NSV4 1193 aa15.16■□□□□ 0.02
CNTF-201ENST00000361987 WDHD1O75717 1129 aaPredicted RBP15.15■□□□□ 0.02
CNTF-201ENST00000361987 TNNI2P48788 182 aa15.15■□□□□ 0.02
CNTF-201ENST00000361987 RASA3Q14644 834 aa15.15■□□□□ 0.02
CNTF-201ENST00000361987 ZMYM1Q5SVZ6 1142 aa15.15■□□□□ 0.02
CNTF-201ENST00000361987 CWC27Q6UX04 472 aaKnown RBP15.15■□□□□ 0.02
CNTF-201ENST00000361987 TICAM2Q86XR7 235 aa15.15■□□□□ 0.02
CNTF-201ENST00000361987 MAST2Q6P0Q8 1798 aa15.15■□□□□ 0.02
CNTF-201ENST00000361987 M0R2C6 588 aa15.14■□□□□ 0.01
CNTF-201ENST00000361987 HIP1O00291 1037 aa15.14■□□□□ 0.01
CNTF-201ENST00000361987 TRAF5O00463 557 aa15.14■□□□□ 0.01
CNTF-201ENST00000361987 USP5P45974 858 aa15.14■□□□□ 0.01
CNTF-201ENST00000361987 NMIQ13287 307 aaPredicted RBP15.14■□□□□ 0.01
CNTF-201ENST00000361987 FKBP1CQ5VVH2 108 aa15.14■□□□□ 0.01
CNTF-201ENST00000361987 IDI2Q9BXS1 227 aa15.14■□□□□ 0.01
CNTF-201ENST00000361987 CRNKL1Q9BZJ0 848 aaKnown RBP15.14■□□□□ 0.01
CNTF-201ENST00000361987 MYH7P12883 1935 aa15.14■□□□□ 0.01
CNTF-201ENST00000361987 GPAA1O43292 621 aa15.14■□□□□ 0.01
CNTF-201ENST00000361987 ITGBL1O95965 494 aaPredicted RBP15.14■□□□□ 0.01
CNTF-201ENST00000361987 TMEM39BQ9GZU3 492 aa15.14■□□□□ 0.01
CNTF-201ENST00000361987 DDX4Q9NQI0 724 aaKnown RBP15.14■□□□□ 0.01
CNTF-201ENST00000361987 HELLSQ9NRZ9 838 aa15.14■□□□□ 0.01
CNTF-201ENST00000361987 FAM198AQ9UFP1 575 aa15.14■□□□□ 0.01
CNTF-201ENST00000361987 A0A0D9SFI3 127 aa15.13■□□□□ 0.01
CNTF-201ENST00000361987 FMR1Q06787 632 aaKnown RBP eCLIP15.13■□□□□ 0.01
CNTF-201ENST00000361987 MCMDC2Q4G0Z9 681 aa15.13■□□□□ 0.01
CNTF-201ENST00000361987 FAM83AQ86UY5 434 aa15.13■□□□□ 0.01
CNTF-201ENST00000361987 MAPKAPK5Q8IW41 473 aa15.13■□□□□ 0.01
CNTF-201ENST00000361987 ZSCAN29Q8IWY8 852 aaPredicted RBP15.13■□□□□ 0.01
CNTF-201ENST00000361987 ZFPM1Q8IX07 1006 aa15.13■□□□□ 0.01
CNTF-201ENST00000361987 SDR42E1Q8WUS8 393 aa15.13■□□□□ 0.01
CNTF-201ENST00000361987 STRBPQ96SI9 672 aaKnown RBP15.13■□□□□ 0.01
CNTF-201ENST00000361987 RFX7Q2KHR2 1363 aa15.13■□□□□ 0.01
CNTF-201ENST00000361987 PRKAB2O43741 272 aa15.12■□□□□ 0.01
CNTF-201ENST00000361987 FSTL1Q12841 308 aa15.12■□□□□ 0.01
CNTF-201ENST00000361987 CCDC129Q6ZRS4 1044 aa15.12■□□□□ 0.01
CNTF-201ENST00000361987 SLC4A4Q9Y6R1 1079 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms