RNA–Protein interactions for RNA: ENST00000359353.9

DDX42-201, Transcript of DEAD-box helicase 42, humanhuman

TSL 5 BASIC

Gene DDX42, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-201ENST00000359353 NRDCO43847 1150 aa27.76■■■□□ 2.03
DDX42-201ENST00000359353 H2AFXP16104 143 aaPredicted RBP27.76■■■□□ 2.03
DDX42-201ENST00000359353 MYL5Q02045 173 aa27.76■■■□□ 2.03
DDX42-201ENST00000359353 FBXL16Q8N461 479 aa27.76■■■□□ 2.03
DDX42-201ENST00000359353 ANGEL1Q9UNK9 670 aaKnown RBP27.76■■■□□ 2.03
DDX42-201ENST00000359353 MYO5AQ9Y4I1 1855 aaKnown RBP27.76■■■□□ 2.03
DDX42-201ENST00000359353 SEC31AO94979 1220 aaKnown RBP27.76■■■□□ 2.03
DDX42-201ENST00000359353 GRIN1Q05586 938 aa27.76■■■□□ 2.03
DDX42-201ENST00000359353 PTPAQ15257 358 aa27.76■■■□□ 2.03
DDX42-201ENST00000359353 TRIM65Q6PJ69 517 aa27.76■■■□□ 2.03
DDX42-201ENST00000359353 NFXL1Q6ZNB6 911 aa27.76■■■□□ 2.03
DDX42-201ENST00000359353 CARD6Q9BX69 1037 aa27.76■■■□□ 2.03
DDX42-201ENST00000359353 PCDHA5Q9Y5H7 936 aa27.76■■■□□ 2.03
DDX42-201ENST00000359353 BMP6P22004 513 aa27.75■■■□□ 2.03
DDX42-201ENST00000359353 GPTP24298 496 aa27.75■■■□□ 2.03
DDX42-201ENST00000359353 TRMT44Q8IYL2 757 aaKnown RBP27.75■■■□□ 2.03
DDX42-201ENST00000359353 INTS13Q9NVM9 706 aa27.75■■■□□ 2.03
DDX42-201ENST00000359353 RANBP6O60518 1105 aaKnown RBP27.74■■■□□ 2.03
DDX42-201ENST00000359353 TOP1P11387 765 aaKnown RBP27.74■■■□□ 2.03
DDX42-201ENST00000359353 ATP2B1P20020 1258 aa27.74■■■□□ 2.03
DDX42-201ENST00000359353 METTL24Q5JXM2 366 aa27.74■■■□□ 2.03
DDX42-201ENST00000359353 GRAMD1CQ8IYS0 662 aa27.74■■■□□ 2.03
DDX42-201ENST00000359353 FHOD1Q9Y613 1164 aa27.74■■■□□ 2.03
DDX42-201ENST00000359353 APOA5Q6Q788 366 aa27.74■■■□□ 2.03
DDX42-201ENST00000359353 CMTR1Q8N1G2 835 aaKnown RBP27.74■■■□□ 2.03
DDX42-201ENST00000359353 CHMP4CQ96CF2 233 aa27.74■■■□□ 2.03
DDX42-201ENST00000359353 FAM53CQ9NYF3 392 aa27.74■■■□□ 2.03
DDX42-201ENST00000359353 TUBE1Q9UJT0 475 aa27.74■■■□□ 2.03
DDX42-201ENST00000359353 ZMYM6O95789 1325 aa27.73■■■□□ 2.03
DDX42-201ENST00000359353 A0A0U1RQG5 324 aaPredicted RBP27.73■■■□□ 2.03
DDX42-201ENST00000359353 IKBKBO14920 756 aa27.73■■■□□ 2.03
DDX42-201ENST00000359353 ZFYP08048 801 aaPredicted RBP27.73■■■□□ 2.03
DDX42-201ENST00000359353 CNNM3Q8NE01 707 aa27.73■■■□□ 2.03
DDX42-201ENST00000359353 HPSEQ9Y251 543 aa27.73■■■□□ 2.03
DDX42-201ENST00000359353 LMTK3Q96Q04 1460 aa27.73■■■□□ 2.03
DDX42-201ENST00000359353 ZBTB22O15209 634 aa27.73■■■□□ 2.03
DDX42-201ENST00000359353 ADKP55263 362 aaKnown RBP27.72■■■□□ 2.03
DDX42-201ENST00000359353 REXO1L1PQ8IX06 675 aa27.72■■■□□ 2.03
DDX42-201ENST00000359353 MNS1Q8NEH6 495 aa27.72■■■□□ 2.03
DDX42-201ENST00000359353 UBXN4Q92575 508 aa27.72■■■□□ 2.03
DDX42-201ENST00000359353 MAP3K14Q99558 947 aa27.72■■■□□ 2.03
DDX42-201ENST00000359353 PIH1D3Q9NQM4 214 aaKnown RBP27.72■■■□□ 2.03
DDX42-201ENST00000359353 KAT6BQ8WYB5 2073 aa27.72■■■□□ 2.03
DDX42-201ENST00000359353 IFIT5Q13325 482 aaKnown RBP27.72■■■□□ 2.03
DDX42-201ENST00000359353 SLC26A6Q9BXS9 759 aa27.72■■■□□ 2.03
DDX42-201ENST00000359353 AKAP2Q9Y2D5 859 aa27.72■■■□□ 2.03
DDX42-201ENST00000359353 C4AP0C0L4 1744 aa27.72■■■□□ 2.03
DDX42-201ENST00000359353 C4BP0C0L5 1744 aa27.72■■■□□ 2.03
DDX42-201ENST00000359353 LRRFIP1Q32MZ4 808 aaKnown RBP27.71■■■□□ 2.03
DDX42-201ENST00000359353 CPDO75976 1380 aa27.71■■■□□ 2.03
DDX42-201ENST00000359353 SH2B2O14492 632 aaPredicted RBP27.71■■■□□ 2.03
DDX42-201ENST00000359353 GUCY1A2P33402 732 aa27.71■■■□□ 2.03
DDX42-201ENST00000359353 VSTM4Q8IW00 320 aa27.71■■■□□ 2.03
DDX42-201ENST00000359353 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.71■■■□□ 2.03
DDX42-201ENST00000359353 KCNH3Q9ULD8 1083 aa27.71■■■□□ 2.03
DDX42-201ENST00000359353 KCNJ14Q9UNX9 436 aa27.71■■■□□ 2.03
DDX42-201ENST00000359353 PNMA6AP0CW24 399 aaPredicted RBP27.71■■■□□ 2.03
DDX42-201ENST00000359353 OLFM4Q6UX06 510 aa27.71■■■□□ 2.03
DDX42-201ENST00000359353 ZKSCAN3Q9BRR0 538 aa27.71■■■□□ 2.03
DDX42-201ENST00000359353 DNAJC5Q9H3Z4 198 aa27.71■■■□□ 2.03
DDX42-201ENST00000359353 WWC3Q9ULE0 1092 aa27.71■■■□□ 2.03
DDX42-201ENST00000359353 NUP188Q5SRE5 1749 aa27.7■■■□□ 2.03
DDX42-201ENST00000359353 PRR29P0C7W0 189 aa27.7■■■□□ 2.02
DDX42-201ENST00000359353 CTDSPL2Q05D32 466 aa27.7■■■□□ 2.02
DDX42-201ENST00000359353 ADAMTSL3P82987 1691 aa27.7■■■□□ 2.02
DDX42-201ENST00000359353 GOLGA8AA7E2F4 631 aa27.7■■■□□ 2.02
DDX42-201ENST00000359353 SNAP23O00161 211 aa27.7■■■□□ 2.02
DDX42-201ENST00000359353 POLR3GO15318 223 aaPredicted RBP27.7■■■□□ 2.02
DDX42-201ENST00000359353 IARSP41252 1262 aaKnown RBP27.7■■■□□ 2.02
DDX42-201ENST00000359353 LDHAL6AQ6ZMR3 332 aa27.7■■■□□ 2.02
DDX42-201ENST00000359353 HELBQ8NG08 1087 aaPredicted RBP27.7■■■□□ 2.02
DDX42-201ENST00000359353 WDR24Q96S15 920 aa27.7■■■□□ 2.02
DDX42-201ENST00000359353 DESI2Q9BSY9 194 aa27.7■■■□□ 2.02
DDX42-201ENST00000359353 C19orf44Q9H6X5 657 aa27.7■■■□□ 2.02
DDX42-201ENST00000359353 TOM1L2Q6ZVM7 507 aa27.69■■■□□ 2.02
DDX42-201ENST00000359353 GREM2Q9H772 168 aa27.69■■■□□ 2.02
DDX42-201ENST00000359353 UBN2Q6ZU65 1347 aa27.69■■■□□ 2.02
DDX42-201ENST00000359353 ZNF532Q9HCE3 1301 aa27.69■■■□□ 2.02
DDX42-201ENST00000359353 BTBD18B2RXH4 712 aa27.69■■■□□ 2.02
DDX42-201ENST00000359353 ZBTB43O43298 467 aa27.69■■■□□ 2.02
DDX42-201ENST00000359353 FMR1Q06787 632 aaKnown RBP eCLIP27.69■■■□□ 2.025e-6■■■□□ 15.4
DDX42-201ENST00000359353 BMS1Q14692 1282 aaKnown RBP27.69■■■□□ 2.02
DDX42-201ENST00000359353 RESP18Q5W5W9 173 aa27.69■■■□□ 2.02
DDX42-201ENST00000359353 KRBA2Q6ZNG9 492 aa27.69■■■□□ 2.02
DDX42-201ENST00000359353 LAMB4A4D0S4 1761 aa27.69■■■□□ 2.02
DDX42-201ENST00000359353 VWA3AA6NCI4 1184 aa27.68■■■□□ 2.02
DDX42-201ENST00000359353 ADD2P35612 726 aa27.68■■■□□ 2.02
DDX42-201ENST00000359353 PLA2G4AP47712 749 aa27.68■■■□□ 2.02
DDX42-201ENST00000359353 TCIRG1Q13488 830 aa27.68■■■□□ 2.02
DDX42-201ENST00000359353 ZCRB1Q8TBF4 217 aaKnown RBP27.68■■■□□ 2.02
DDX42-201ENST00000359353 CCDC102BQ68D86 513 aa27.68■■■□□ 2.02
DDX42-201ENST00000359353 TOGARAM2Q6ZUX3 1019 aa27.68■■■□□ 2.02
DDX42-201ENST00000359353 ISCA1Q9BUE6 129 aa27.68■■■□□ 2.02
DDX42-201ENST00000359353 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.68■■■□□ 2.02
DDX42-201ENST00000359353 FAM217BQ9NTX9 383 aaPredicted RBP27.68■■■□□ 2.02
DDX42-201ENST00000359353 PARP3Q9Y6F1 533 aa27.68■■■□□ 2.02
DDX42-201ENST00000359353 ALS2Q96Q42 1657 aa27.67■■■□□ 2.02
DDX42-201ENST00000359353 TMEM67Q5HYA8 995 aa27.67■■■□□ 2.02
DDX42-201ENST00000359353 RRP12Q5JTH9 1297 aaKnown RBP27.67■■■□□ 2.02
DDX42-201ENST00000359353 TMEM139Q8IV31 216 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms