RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 TMEM87BQ96K49 555 aa14.03□□□□□ -0.16
COL20A1-201ENST00000358894 VAT1LQ9HCJ6 419 aa14.03□□□□□ -0.16
COL20A1-201ENST00000358894 REREQ9P2R6 1566 aa14.02□□□□□ -0.16
COL20A1-201ENST00000358894 PCCAP05165 728 aaPredicted RBP14.02□□□□□ -0.16
COL20A1-201ENST00000358894 PDE6AP16499 860 aa14.02□□□□□ -0.16
COL20A1-201ENST00000358894 CASQ1P31415 396 aa14.02□□□□□ -0.16
COL20A1-201ENST00000358894 NDUFA8P51970 172 aa14.02□□□□□ -0.16
COL20A1-201ENST00000358894 MYL5Q02045 173 aa14.02□□□□□ -0.16
COL20A1-201ENST00000358894 RESTQ13127 1097 aa14.02□□□□□ -0.16
COL20A1-201ENST00000358894 KIF4BQ2VIQ3 1234 aa14.02□□□□□ -0.16
COL20A1-201ENST00000358894 ADALQ6DHV7 355 aa14.02□□□□□ -0.16
COL20A1-201ENST00000358894 NBPF5PQ86XG9 351 aaPredicted RBP14.02□□□□□ -0.16
COL20A1-201ENST00000358894 PUS7LQ9H0K6 701 aaKnown RBP14.02□□□□□ -0.16
COL20A1-201ENST00000358894 KCNH3Q9ULD8 1083 aa14.02□□□□□ -0.16
COL20A1-201ENST00000358894 HEG1Q9ULI3 1381 aa14.02□□□□□ -0.16
COL20A1-201ENST00000358894 DIP2AQ14689 1571 aa14.02□□□□□ -0.16
COL20A1-201ENST00000358894 SYNE4Q8N205 404 aa14.02□□□□□ -0.17
COL20A1-201ENST00000358894 SPATA5Q8NB90 893 aa14.02□□□□□ -0.17
COL20A1-201ENST00000358894 NCAPD2Q15021 1401 aa14.02□□□□□ -0.17
COL20A1-201ENST00000358894 H7C1W4 665 aa14.02□□□□□ -0.17
COL20A1-201ENST00000358894 C11orf57Q6ZUT1 292 aaPredicted RBP14.02□□□□□ -0.17
COL20A1-201ENST00000358894 FBXO18Q8NFZ0 1043 aa14.02□□□□□ -0.17
COL20A1-201ENST00000358894 KRT222Q8N1A0 295 aa14.01□□□□□ -0.17
COL20A1-201ENST00000358894 CCDC24Q8N4L8 307 aa14.01□□□□□ -0.17
COL20A1-201ENST00000358894 NUP88Q99567 741 aaPredicted RBP14.01□□□□□ -0.17
COL20A1-201ENST00000358894 KIAA1468Q9P260 1216 aa14.01□□□□□ -0.17
COL20A1-201ENST00000358894 ZBTB1Q9Y2K1 713 aa14.01□□□□□ -0.17
COL20A1-201ENST00000358894 TANGO6Q9C0B7 1094 aa14.01□□□□□ -0.17
COL20A1-201ENST00000358894 YEATS4O95619 227 aa14.01□□□□□ -0.17
COL20A1-201ENST00000358894 PFKFB1P16118 471 aa14.01□□□□□ -0.17
COL20A1-201ENST00000358894 PDE4BQ07343 736 aa14.01□□□□□ -0.17
COL20A1-201ENST00000358894 NGLY1Q96IV0 654 aa14.01□□□□□ -0.17
COL20A1-201ENST00000358894 XPO4Q9C0E2 1151 aaKnown RBP14.01□□□□□ -0.17
COL20A1-201ENST00000358894 KAT14Q9H8E8 782 aa14.01□□□□□ -0.17
COL20A1-201ENST00000358894 POLR2DO15514 142 aaKnown RBP14.01□□□□□ -0.17
COL20A1-201ENST00000358894 GNAT2P19087 354 aa14.01□□□□□ -0.17
COL20A1-201ENST00000358894 FANCCQ00597 558 aa14.01□□□□□ -0.17
COL20A1-201ENST00000358894 AXDND1Q5T1B0 1012 aaPredicted RBP14.01□□□□□ -0.17
COL20A1-201ENST00000358894 KANK3Q6NY19 840 aa14.01□□□□□ -0.17
COL20A1-201ENST00000358894 PGBD1Q96JS3 809 aa14.01□□□□□ -0.17
COL20A1-201ENST00000358894 CRNKL1Q9BZJ0 848 aaKnown RBP14.01□□□□□ -0.17
COL20A1-201ENST00000358894 BCL2L12Q9HB09 334 aa14.01□□□□□ -0.17
COL20A1-201ENST00000358894 CARMIL3Q8ND23 1372 aa14□□□□□ -0.17
COL20A1-201ENST00000358894 WDR17Q8IZU2 1322 aa14□□□□□ -0.17
COL20A1-201ENST00000358894 NBPF26B4DH59 902 aa14□□□□□ -0.17
COL20A1-201ENST00000358894 N4BP3O15049 544 aa14□□□□□ -0.17
COL20A1-201ENST00000358894 EPS15P42566 896 aa14□□□□□ -0.17
COL20A1-201ENST00000358894 NBPF14Q5TI25 921 aa14□□□□□ -0.17
COL20A1-201ENST00000358894 NBPF10Q6P3W6 841 aaKnown RBP14□□□□□ -0.17
COL20A1-201ENST00000358894 NBPF15Q8N660 670 aa14□□□□□ -0.17
COL20A1-201ENST00000358894 KAZALD1Q96I82 304 aa14□□□□□ -0.17
COL20A1-201ENST00000358894 GPR108Q9NPR9 543 aa14□□□□□ -0.17
COL20A1-201ENST00000358894 KIF5CO60282 957 aa14□□□□□ -0.17
COL20A1-201ENST00000358894 SLU7O95391 586 aaKnown RBP14□□□□□ -0.17
COL20A1-201ENST00000358894 UBA7P41226 1012 aa14□□□□□ -0.17
COL20A1-201ENST00000358894 AIFM3Q96NN9 605 aa14□□□□□ -0.17
COL20A1-201ENST00000358894 CCDC12Q8WUD4 166 aaPredicted RBP14□□□□□ -0.17
COL20A1-201ENST00000358894 USP42Q9H9J4 1324 aaKnown RBP13.99□□□□□ -0.17
COL20A1-201ENST00000358894 KRT18P05783 430 aaKnown RBP13.99□□□□□ -0.17
COL20A1-201ENST00000358894 GTF2A1P52655 376 aaPredicted RBP13.99□□□□□ -0.17
COL20A1-201ENST00000358894 PNOCQ13519 176 aa13.99□□□□□ -0.17
COL20A1-201ENST00000358894 GIGYF2Q6Y7W6 1299 aaKnown RBP13.99□□□□□ -0.17
COL20A1-201ENST00000358894 CLIC6Q96NY7 704 aa13.99□□□□□ -0.17
COL20A1-201ENST00000358894 NLRP3Q96P20 1036 aa13.99□□□□□ -0.17
COL20A1-201ENST00000358894 DIP2BQ9P265 1576 aa13.99□□□□□ -0.17
COL20A1-201ENST00000358894 RICTORQ6R327 1708 aa13.99□□□□□ -0.17
COL20A1-201ENST00000358894 SNAP23O00161 211 aa13.99□□□□□ -0.17
COL20A1-201ENST00000358894 PDE8BO95263 885 aa13.99□□□□□ -0.17
COL20A1-201ENST00000358894 RRAGBQ5VZM2 374 aa13.99□□□□□ -0.17
COL20A1-201ENST00000358894 KIAA1524Q8TCG1 905 aa13.99□□□□□ -0.17
COL20A1-201ENST00000358894 RCOR1Q9UKL0 485 aa13.99□□□□□ -0.17
COL20A1-201ENST00000358894 CIAO1O76071 339 aa13.99□□□□□ -0.17
COL20A1-201ENST00000358894 KIF5BP33176 963 aa13.99□□□□□ -0.17
COL20A1-201ENST00000358894 BCAMP50895 628 aa13.99□□□□□ -0.17
COL20A1-201ENST00000358894 PDIA6Q15084 440 aa13.99□□□□□ -0.17
COL20A1-201ENST00000358894 ZNF174Q15697 407 aa13.99□□□□□ -0.17
COL20A1-201ENST00000358894 UTP14CQ5TAP6 766 aaKnown RBP13.99□□□□□ -0.17
COL20A1-201ENST00000358894 CACTINQ8WUQ7 758 aaKnown RBP13.99□□□□□ -0.17
COL20A1-201ENST00000358894 CCDC102AQ96A19 550 aa13.99□□□□□ -0.17
COL20A1-201ENST00000358894 V9GY48 417 aaPredicted RBP13.99□□□□□ -0.17
COL20A1-201ENST00000358894 MAP3K15Q6ZN16 1313 aa13.99□□□□□ -0.17
COL20A1-201ENST00000358894 STOX1Q6ZVD7 989 aa13.98□□□□□ -0.17
COL20A1-201ENST00000358894 TDRD7Q8NHU6 1098 aaKnown RBP13.98□□□□□ -0.17
COL20A1-201ENST00000358894 RIMBP3CA6NJZ7 1639 aa13.98□□□□□ -0.17
COL20A1-201ENST00000358894 RIMBP3BA6NNM3 1639 aa13.98□□□□□ -0.17
COL20A1-201ENST00000358894 RIMBP3Q9UFD9 1639 aa13.98□□□□□ -0.17
COL20A1-201ENST00000358894 VWA3AA6NCI4 1184 aa13.98□□□□□ -0.17
COL20A1-201ENST00000358894 KARSQ15046 597 aaKnown RBP13.98□□□□□ -0.17
COL20A1-201ENST00000358894 AKNAD1Q5T1N1 836 aa13.98□□□□□ -0.17
COL20A1-201ENST00000358894 KIAA1328Q86T90 577 aa13.98□□□□□ -0.17
COL20A1-201ENST00000358894 MCM9Q9NXL9 1143 aa13.98□□□□□ -0.17
COL20A1-201ENST00000358894 BTBD18B2RXH4 712 aa13.98□□□□□ -0.17
COL20A1-201ENST00000358894 NLRP12P59046 1061 aa13.98□□□□□ -0.17
COL20A1-201ENST00000358894 DPCR1Q3MIW9 517 aa13.98□□□□□ -0.17
COL20A1-201ENST00000358894 RILPL1Q5EBL4 403 aa13.98□□□□□ -0.17
COL20A1-201ENST00000358894 TRMT44Q8IYL2 757 aaKnown RBP13.98□□□□□ -0.17
COL20A1-201ENST00000358894 IFNL3Q8IZI9 196 aa13.98□□□□□ -0.17
COL20A1-201ENST00000358894 SDR42E1Q8WUS8 393 aa13.98□□□□□ -0.17
COL20A1-201ENST00000358894 SETDB2Q96T68 719 aa13.98□□□□□ -0.17
COL20A1-201ENST00000358894 SEC63Q9UGP8 760 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms