RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 CCZ1BP86790 482 aa9.96□□□□□ -0.82
RFX3-202ENST00000358730 CCZ1P86791 482 aaPredicted RBP9.96□□□□□ -0.82
RFX3-202ENST00000358730 PPP4R3BQ5MIZ7 849 aa9.96□□□□□ -0.82
RFX3-202ENST00000358730 AXDND1Q5T1B0 1012 aaPredicted RBP9.96□□□□□ -0.82
RFX3-202ENST00000358730 NFXL1Q6ZNB6 911 aa9.96□□□□□ -0.82
RFX3-202ENST00000358730 CCDC112Q8NEF3 446 aa9.96□□□□□ -0.82
RFX3-202ENST00000358730 SENP2Q9HC62 589 aa9.96□□□□□ -0.82
RFX3-202ENST00000358730 LRP5O75197 1615 aa9.96□□□□□ -0.82
RFX3-202ENST00000358730 ARAP2Q8WZ64 1704 aa9.96□□□□□ -0.82
RFX3-202ENST00000358730 ZBTB43O43298 467 aa9.96□□□□□ -0.82
RFX3-202ENST00000358730 PDE8AO60658 829 aa9.96□□□□□ -0.82
RFX3-202ENST00000358730 CYP19A1P11511 503 aaPredicted RBP9.96□□□□□ -0.82
RFX3-202ENST00000358730 CMA1P23946 247 aa9.96□□□□□ -0.82
RFX3-202ENST00000358730 ARID4AP29374 1257 aaPredicted RBP9.96□□□□□ -0.82
RFX3-202ENST00000358730 CDC27P30260 824 aa9.96□□□□□ -0.82
RFX3-202ENST00000358730 PUM3Q15397 648 aaKnown RBP9.96□□□□□ -0.82
RFX3-202ENST00000358730 CEP135Q66GS9 1140 aa9.96□□□□□ -0.82
RFX3-202ENST00000358730 KRT40Q6A162 431 aa9.96□□□□□ -0.82
RFX3-202ENST00000358730 HELBQ8NG08 1087 aaPredicted RBP9.96□□□□□ -0.82
RFX3-202ENST00000358730 ANKRD7Q92527 254 aa9.96□□□□□ -0.82
RFX3-202ENST00000358730 BPIFA3Q9BQP9 254 aa9.96□□□□□ -0.82
RFX3-202ENST00000358730 PAXBP1Q9Y5B6 917 aa9.96□□□□□ -0.82
RFX3-202ENST00000358730 GOLGA8AA7E2F4 631 aa9.95□□□□□ -0.82
RFX3-202ENST00000358730 WDHD1O75717 1129 aaPredicted RBP9.95□□□□□ -0.82
RFX3-202ENST00000358730 UQCRFS1P1P0C7P4 283 aa9.95□□□□□ -0.82
RFX3-202ENST00000358730 GSDMDP57764 484 aa9.95□□□□□ -0.82
RFX3-202ENST00000358730 SLC39A14Q15043 492 aa9.95□□□□□ -0.82
RFX3-202ENST00000358730 NBPF11Q86T75 865 aa9.95□□□□□ -0.82
RFX3-202ENST00000358730 SYTL4Q96C24 671 aaPredicted RBP9.95□□□□□ -0.82
RFX3-202ENST00000358730 TMEM87BQ96K49 555 aa9.95□□□□□ -0.82
RFX3-202ENST00000358730 SLC4A9Q96Q91 983 aa9.95□□□□□ -0.82
RFX3-202ENST00000358730 MYL10Q9BUA6 226 aa9.95□□□□□ -0.82
RFX3-202ENST00000358730 TCRBV5S4A2TA0A5A2 114 aa9.95□□□□□ -0.82
RFX3-202ENST00000358730 NLRP12P59046 1061 aa9.95□□□□□ -0.82
RFX3-202ENST00000358730 TPM4P67936 248 aa9.95□□□□□ -0.82
RFX3-202ENST00000358730 NCBP1Q09161 790 aaKnown RBP9.95□□□□□ -0.82
RFX3-202ENST00000358730 TRIM29Q14134 588 aa9.95□□□□□ -0.82
RFX3-202ENST00000358730 TMEM67Q5HYA8 995 aa9.95□□□□□ -0.82
RFX3-202ENST00000358730 LPIN2Q92539 896 aa9.95□□□□□ -0.82
RFX3-202ENST00000358730 BTG4Q9NY30 223 aa9.95□□□□□ -0.82
RFX3-202ENST00000358730 IFNKQ9P0W0 207 aa9.95□□□□□ -0.82
RFX3-202ENST00000358730 UBN2Q6ZU65 1347 aa9.95□□□□□ -0.82
RFX3-202ENST00000358730 BCL9O00512 1426 aa9.95□□□□□ -0.82
RFX3-202ENST00000358730 SYKP43405 635 aa9.94□□□□□ -0.82
RFX3-202ENST00000358730 PTPN14Q15678 1187 aa9.94□□□□□ -0.82
RFX3-202ENST00000358730 DZIP3Q86Y13 1208 aaKnown RBP9.94□□□□□ -0.82
RFX3-202ENST00000358730 JMYQ8N9B5 988 aa9.94□□□□□ -0.82
RFX3-202ENST00000358730 STRBPQ96SI9 672 aaKnown RBP9.94□□□□□ -0.82
RFX3-202ENST00000358730 XPO4Q9C0E2 1151 aaKnown RBP9.94□□□□□ -0.82
RFX3-202ENST00000358730 NAPBQ9H115 298 aa9.94□□□□□ -0.82
RFX3-202ENST00000358730 LY9Q9HBG7 655 aa9.94□□□□□ -0.82
RFX3-202ENST00000358730 TRMT1Q9NXH9 659 aaKnown RBP9.94□□□□□ -0.82
RFX3-202ENST00000358730 MBD4O95243 580 aa9.94□□□□□ -0.82
RFX3-202ENST00000358730 IARSP41252 1262 aaKnown RBP9.94□□□□□ -0.82
RFX3-202ENST00000358730 ISM2Q6H9L7 571 aa9.94□□□□□ -0.82
RFX3-202ENST00000358730 TMC6Q7Z403 805 aa9.94□□□□□ -0.82
RFX3-202ENST00000358730 MAGEB6Q8N7X4 407 aa9.94□□□□□ -0.82
RFX3-202ENST00000358730 SPATA5Q8NB90 893 aa9.94□□□□□ -0.82
RFX3-202ENST00000358730 EPB41L4AQ9HCS5 686 aaPredicted RBP9.94□□□□□ -0.82
RFX3-202ENST00000358730 INCENPQ9NQS7 918 aa9.94□□□□□ -0.82
RFX3-202ENST00000358730 DOCK2Q92608 1830 aa9.94□□□□□ -0.82
RFX3-202ENST00000358730 MROH5Q6ZUA9 1318 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 ZNF335Q9H4Z2 1342 aaPredicted RBP9.93□□□□□ -0.82
RFX3-202ENST00000358730 RANBP6O60518 1105 aaKnown RBP9.93□□□□□ -0.82
RFX3-202ENST00000358730 NYAP1Q6ZVC0 841 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 RGS22Q8NE09 1264 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 IGDCC4Q8TDY8 1250 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 OSBPL5Q9H0X9 879 aaPredicted RBP9.93□□□□□ -0.82
RFX3-202ENST00000358730 IMPACTQ9P2X3 320 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 PPP6R2O75170 966 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 SLC5A1P13866 664 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 CTDSPL2Q05D32 466 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 MAP3K12Q12852 859 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 RASGRF1Q13972 1273 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 SHC4Q6S5L8 630 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 SGMS1Q86VZ5 419 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 CCAR2Q8N163 923 aaKnown RBP9.93□□□□□ -0.82
RFX3-202ENST00000358730 SLC26A6Q9BXS9 759 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 SLC12A7Q9Y666 1083 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 NHSL1Q5SYE7 1610 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 SNAP23O00161 211 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 IFIT3O14879 490 aaKnown RBP9.93□□□□□ -0.82
RFX3-202ENST00000358730 FGFR2P21802 821 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 LMOD1P29536 600 aaPredicted RBP9.93□□□□□ -0.82
RFX3-202ENST00000358730 NCAPHQ15003 741 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 PTPAQ15257 358 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 NTRK3Q16288 839 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 IFNL3Q8IZI9 196 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 CCDC150Q8NCX0 1101 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 TIGD1Q96MW7 591 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 ARMT1Q9H993 441 aa9.93□□□□□ -0.82
RFX3-202ENST00000358730 TIAM2Q8IVF5 1701 aa9.92□□□□□ -0.82
RFX3-202ENST00000358730 SLIT2O94813 1529 aa9.92□□□□□ -0.82
RFX3-202ENST00000358730 ERVV-1B6SEH8 477 aa9.92□□□□□ -0.82
RFX3-202ENST00000358730 UBE2Q2LH0YL09 131 aa9.92□□□□□ -0.82
RFX3-202ENST00000358730 SFPQP23246 707 aaKnown RBP eCLIP9.92□□□□□ -0.82
RFX3-202ENST00000358730 CLIC6Q96NY7 704 aa9.92□□□□□ -0.82
RFX3-202ENST00000358730 MAP3K14Q99558 947 aa9.92□□□□□ -0.82
RFX3-202ENST00000358730 PRDM10Q9NQV6 1147 aa9.92□□□□□ -0.82
RFX3-202ENST00000358730 TOMM22Q9NS69 142 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms