RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 DCAF8Q5TAQ9 597 aa20.27■□□□□ 0.84
TPM1-205ENST00000357980 SOGA3Q5TF21 947 aa20.27■□□□□ 0.84
TPM1-205ENST00000357980 SLKQ9H2G2 1235 aaPredicted RBP20.27■□□□□ 0.84
TPM1-205ENST00000357980 LAMB1P07942 1786 aa20.26■□□□□ 0.83
TPM1-205ENST00000357980 DDIT3P35638 169 aa20.26■□□□□ 0.83
TPM1-205ENST00000357980 DALRD3Q5D0E6 543 aaKnown RBP20.26■□□□□ 0.83
TPM1-205ENST00000357980 NOL8Q76FK4 1167 aaKnown RBP20.26■□□□□ 0.83
TPM1-205ENST00000357980 TBC1D10CQ8IV04 446 aa20.26■□□□□ 0.83
TPM1-205ENST00000357980 FAM163AQ96GL9 167 aaPredicted RBP20.26■□□□□ 0.83
TPM1-205ENST00000357980 LDHCP07864 332 aa20.25■□□□□ 0.83
TPM1-205ENST00000357980 TDO2P48775 406 aa20.25■□□□□ 0.83
TPM1-205ENST00000357980 PPP4CP60510 307 aa20.25■□□□□ 0.83
TPM1-205ENST00000357980 CUL4AQ13619 759 aa20.25■□□□□ 0.83
TPM1-205ENST00000357980 GIMAP6Q6P9H5 292 aa20.25■□□□□ 0.83
TPM1-205ENST00000357980 TCEANC2Q96MN5 208 aa20.25■□□□□ 0.83
TPM1-205ENST00000357980 KCNQ5Q9NR82 932 aa20.25■□□□□ 0.83
TPM1-205ENST00000357980 PPP1R1BQ9UD71 204 aaPredicted RBP20.25■□□□□ 0.83
TPM1-205ENST00000357980 LIMCH1Q9UPQ0 1083 aa20.25■□□□□ 0.83
TPM1-205ENST00000357980 COL4A5P29400 1685 aa20.25■□□□□ 0.83
TPM1-205ENST00000357980 GAKO14976 1311 aa20.25■□□□□ 0.83
TPM1-205ENST00000357980 PPIP5K2O43314 1243 aa20.25■□□□□ 0.83
TPM1-205ENST00000357980 DHX32Q7L7V1 743 aaKnown RBP20.25■□□□□ 0.83
TPM1-205ENST00000357980 CRNKL1Q9BZJ0 848 aaKnown RBP20.25■□□□□ 0.83
TPM1-205ENST00000357980 FOCADQ5VW36 1801 aa20.24■□□□□ 0.83
TPM1-205ENST00000357980 FKBP1AP62942 108 aaKnown RBP20.24■□□□□ 0.83
TPM1-205ENST00000357980 EXOSC10Q01780 885 aaKnown RBP20.24■□□□□ 0.83
TPM1-205ENST00000357980 TOB2Q14106 344 aaPredicted RBP20.24■□□□□ 0.83
TPM1-205ENST00000357980 STRIP1Q5VSL9 837 aa20.24■□□□□ 0.83
TPM1-205ENST00000357980 FBXW7Q969H0 707 aa20.24■□□□□ 0.83
TPM1-205ENST00000357980 MXD3Q9BW11 206 aa20.24■□□□□ 0.83
TPM1-205ENST00000357980 ADAMTSL1Q8N6G6 1762 aa20.24■□□□□ 0.83
TPM1-205ENST00000357980 ARFGEF1Q9Y6D6 1849 aa20.24■□□□□ 0.83
TPM1-205ENST00000357980 NAV1Q8NEY1 1877 aa20.23■□□□□ 0.83
TPM1-205ENST00000357980 GPR75-ASB3A0A0A6YYF3 556 aa20.23■□□□□ 0.83
TPM1-205ENST00000357980 HSP90AA1P07900 732 aaKnown RBP20.23■□□□□ 0.83
TPM1-205ENST00000357980 ILDR2Q71H61 639 aa20.23■□□□□ 0.83
TPM1-205ENST00000357980 SLF2Q8IX21 1173 aa20.23■□□□□ 0.83
TPM1-205ENST00000357980 DDX60LQ5H9U9 1706 aaKnown RBP20.23■□□□□ 0.83
TPM1-205ENST00000357980 ANKRD1Q15327 319 aa20.23■□□□□ 0.83
TPM1-205ENST00000357980 DACT2Q5SW24 774 aa20.23■□□□□ 0.83
TPM1-205ENST00000357980 CERS3Q8IU89 383 aa20.23■□□□□ 0.83
TPM1-205ENST00000357980 MB21D2Q8IYB1 491 aaPredicted RBP20.23■□□□□ 0.83
TPM1-205ENST00000357980 LARP6Q9BRS8 491 aaKnown RBP20.23■□□□□ 0.83
TPM1-205ENST00000357980 VPS33BQ9H267 617 aa20.23■□□□□ 0.83
TPM1-205ENST00000357980 DCP1AQ9NPI6 582 aaPredicted RBP20.23■□□□□ 0.83
TPM1-205ENST00000357980 ATP8A2Q9NTI2 1148 aa20.23■□□□□ 0.83
TPM1-205ENST00000357980 YDJCA8MPS7 323 aa20.22■□□□□ 0.83
TPM1-205ENST00000357980 BAG3O95817 575 aa20.22■□□□□ 0.83
TPM1-205ENST00000357980 KLHL34Q8N239 644 aa20.22■□□□□ 0.83
TPM1-205ENST00000357980 AGXT2Q9BYV1 514 aa20.22■□□□□ 0.83
TPM1-205ENST00000357980 ANAPC4Q9UJX5 808 aa20.22■□□□□ 0.83
TPM1-205ENST00000357980 USP17L3A6NCW0 530 aa20.21■□□□□ 0.83
TPM1-205ENST00000357980 USP17L4A6NCW7 530 aa20.21■□□□□ 0.83
TPM1-205ENST00000357980 USP17L1Q7RTZ2 530 aa20.21■□□□□ 0.83
TPM1-205ENST00000357980 NCOA7Q8NI08 942 aa20.21■□□□□ 0.83
TPM1-205ENST00000357980 SH3RF3Q8TEJ3 882 aaPredicted RBP20.21■□□□□ 0.83
TPM1-205ENST00000357980 SPON1Q9HCB6 807 aa20.21■□□□□ 0.83
TPM1-205ENST00000357980 ZNF277Q9NRM2 450 aaPredicted RBP20.21■□□□□ 0.83
TPM1-205ENST00000357980 FOXD4L1Q9NU39 408 aa20.21■□□□□ 0.83
TPM1-205ENST00000357980 MKRN1Q9UHC7 482 aaKnown RBP20.21■□□□□ 0.83
TPM1-205ENST00000357980 TPCN1Q9ULQ1 816 aa20.21■□□□□ 0.83
TPM1-205ENST00000357980 DAGLAQ9Y4D2 1042 aa20.21■□□□□ 0.83
TPM1-205ENST00000357980 LARGE1O95461 756 aa20.2■□□□□ 0.82
TPM1-205ENST00000357980 BTDP43251 543 aa20.2■□□□□ 0.82
TPM1-205ENST00000357980 CTDSPL2Q05D32 466 aa20.2■□□□□ 0.82
TPM1-205ENST00000357980 FBXL16Q8N461 479 aa20.2■□□□□ 0.82
TPM1-205ENST00000357980 NOL10Q9BSC4 688 aaKnown RBP20.2■□□□□ 0.82
TPM1-205ENST00000357980 TTF2Q9UNY4 1162 aaKnown RBP20.2■□□□□ 0.82
TPM1-205ENST00000357980 TACC3Q9Y6A5 838 aa20.2■□□□□ 0.82
TPM1-205ENST00000357980 NEDD4P46934 1319 aa20.2■□□□□ 0.82
TPM1-205ENST00000357980 PPARAQ07869 468 aa20.2■□□□□ 0.82
TPM1-205ENST00000357980 AKNAD1Q5T1N1 836 aa20.2■□□□□ 0.82
TPM1-205ENST00000357980 Q6ZUG5 572 aa20.2■□□□□ 0.82
TPM1-205ENST00000357980 STAG1Q8WVM7 1258 aa20.2■□□□□ 0.82
TPM1-205ENST00000357980 INTS4Q96HW7 963 aaKnown RBP20.2■□□□□ 0.82
TPM1-205ENST00000357980 ZSCAN31Q96LW9 406 aaPredicted RBP20.2■□□□□ 0.82
TPM1-205ENST00000357980 SH2B1Q9NRF2 756 aaPredicted RBP20.2■□□□□ 0.82
TPM1-205ENST00000357980 WDR19Q8NEZ3 1342 aa20.19■□□□□ 0.82
TPM1-205ENST00000357980 ECM29Q5VYK3 1845 aa20.19■□□□□ 0.82
TPM1-205ENST00000357980 ANTXR2P58335 489 aa20.19■□□□□ 0.82
TPM1-205ENST00000357980 RHBDL3P58872 404 aa20.19■□□□□ 0.82
TPM1-205ENST00000357980 CTR9Q6PD62 1173 aa20.19■□□□□ 0.82
TPM1-205ENST00000357980 RALYLQ86SE5 291 aaKnown RBP20.19■□□□□ 0.82
TPM1-205ENST00000357980 NLGN2Q8NFZ4 835 aa20.19■□□□□ 0.82
TPM1-205ENST00000357980 NKX2-3Q8TAU0 364 aa20.19■□□□□ 0.82
TPM1-205ENST00000357980 LRRC2Q9BYS8 371 aa20.19■□□□□ 0.82
TPM1-205ENST00000357980 F8W031 263 aaPredicted RBP20.18■□□□□ 0.82
TPM1-205ENST00000357980 PLCG2P16885 1265 aa20.18■□□□□ 0.82
TPM1-205ENST00000357980 MCM5P33992 734 aa20.18■□□□□ 0.82
TPM1-205ENST00000357980 TRDNQ13061 729 aa20.18■□□□□ 0.82
TPM1-205ENST00000357980 ME3Q16798 604 aa20.18■□□□□ 0.82
TPM1-205ENST00000357980 LARGE2Q8N3Y3 721 aa20.18■□□□□ 0.82
TPM1-205ENST00000357980 SBK1Q52WX2 424 aa20.18■□□□□ 0.82
TPM1-205ENST00000357980 HHIPL2Q6UWX4 724 aa20.18■□□□□ 0.82
TPM1-205ENST00000357980 INCENPQ9NQS7 918 aa20.18■□□□□ 0.82
TPM1-205ENST00000357980 MINDY4BA8MYZ0 360 aa20.17■□□□□ 0.82
TPM1-205ENST00000357980 USP17L12C9JPN9 530 aa20.17■□□□□ 0.82
TPM1-205ENST00000357980 USP17L21D6R901 530 aa20.17■□□□□ 0.82
TPM1-205ENST00000357980 SMIM22K7EJ46 135 aa20.17■□□□□ 0.82
TPM1-205ENST00000357980 NFKBIEO00221 500 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms