RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 TICAM2Q86XR7 235 aa17.93■□□□□ 0.46
CCNE1-202ENST00000357943 MYH2Q9UKX2 1941 aa17.92■□□□□ 0.46
CCNE1-202ENST00000357943 VEGFAP15692 232 aaPredicted RBP17.92■□□□□ 0.46
CCNE1-202ENST00000357943 YY1P25490 414 aa17.92■□□□□ 0.46
CCNE1-202ENST00000357943 CHMLP26374 656 aa17.92■□□□□ 0.46
CCNE1-202ENST00000357943 CWC27Q6UX04 472 aaKnown RBP17.92■□□□□ 0.46
CCNE1-202ENST00000357943 RIOK1Q9BRS2 568 aaKnown RBP17.92■□□□□ 0.46
CCNE1-202ENST00000357943 TDRD3Q9H7E2 651 aaKnown RBP17.92■□□□□ 0.46
CCNE1-202ENST00000357943 DIAPH3Q9NSV4 1193 aa17.92■□□□□ 0.46
CCNE1-202ENST00000357943 ASTN2O75129 1339 aaPredicted RBP17.92■□□□□ 0.46
CCNE1-202ENST00000357943 MYH7P12883 1935 aa17.91■□□□□ 0.46
CCNE1-202ENST00000357943 M0R2C6 588 aa17.91■□□□□ 0.46
CCNE1-202ENST00000357943 HIP1O00291 1037 aa17.91■□□□□ 0.46
CCNE1-202ENST00000357943 RHBDL3P58872 404 aa17.91■□□□□ 0.46
CCNE1-202ENST00000357943 CDC42EP5Q6NZY7 148 aa17.91■□□□□ 0.46
CCNE1-202ENST00000357943 SCN4AP35499 1836 aa17.91■□□□□ 0.46
CCNE1-202ENST00000357943 AK9Q5TCS8 1911 aa17.91■□□□□ 0.46
CCNE1-202ENST00000357943 MAGEB6P1A0A0J9YX57 407 aa17.9■□□□□ 0.46
CCNE1-202ENST00000357943 CLRN2A0PK11 232 aa17.9■□□□□ 0.46
CCNE1-202ENST00000357943 BAG3O95817 575 aa17.9■□□□□ 0.46
CCNE1-202ENST00000357943 PPP4CP60510 307 aa17.9■□□□□ 0.46
CCNE1-202ENST00000357943 USP50Q70EL3 339 aaPredicted RBP17.9■□□□□ 0.46
CCNE1-202ENST00000357943 LCORLQ8N3X6 602 aa17.9■□□□□ 0.46
CCNE1-202ENST00000357943 IL25Q9H293 177 aa17.9■□□□□ 0.46
CCNE1-202ENST00000357943 MBD4O95243 580 aa17.9■□□□□ 0.46
CCNE1-202ENST00000357943 EAPPQ56P03 285 aaPredicted RBP17.9■□□□□ 0.46
CCNE1-202ENST00000357943 CCDC129Q6ZRS4 1044 aa17.9■□□□□ 0.46
CCNE1-202ENST00000357943 SH3RF3Q8TEJ3 882 aaPredicted RBP17.9■□□□□ 0.46
CCNE1-202ENST00000357943 AIDAQ96BJ3 306 aa17.9■□□□□ 0.46
CCNE1-202ENST00000357943 NOL10Q9BSC4 688 aaKnown RBP17.9■□□□□ 0.46
CCNE1-202ENST00000357943 ARMT1Q9H993 441 aa17.9■□□□□ 0.46
CCNE1-202ENST00000357943 GPBP1L1Q9HC44 474 aaPredicted RBP17.9■□□□□ 0.46
CCNE1-202ENST00000357943 HELLSQ9NRZ9 838 aa17.9■□□□□ 0.46
CCNE1-202ENST00000357943 USP40Q9NVE5 1235 aa17.9■□□□□ 0.46
CCNE1-202ENST00000357943 GPAA1O43292 621 aa17.89■□□□□ 0.45
CCNE1-202ENST00000357943 CDC45O75419 566 aa17.89■□□□□ 0.45
CCNE1-202ENST00000357943 POTEIP0CG38 1075 aa17.89■□□□□ 0.45
CCNE1-202ENST00000357943 POTEJP0CG39 1038 aa17.89■□□□□ 0.45
CCNE1-202ENST00000357943 CACNB3P54284 484 aa17.89■□□□□ 0.45
CCNE1-202ENST00000357943 MCMDC2Q4G0Z9 681 aa17.89■□□□□ 0.45
CCNE1-202ENST00000357943 ZNF589Q86UQ0 364 aaPredicted RBP17.89■□□□□ 0.45
CCNE1-202ENST00000357943 MYO1BO43795 1136 aa17.88■□□□□ 0.45
CCNE1-202ENST00000357943 SPDYE2Q495Y8 402 aa17.88■□□□□ 0.45
CCNE1-202ENST00000357943 PNMA8AQ86V59 439 aaPredicted RBP17.88■□□□□ 0.45
CCNE1-202ENST00000357943 ZNF70Q9UC06 446 aaPredicted RBP17.88■□□□□ 0.45
CCNE1-202ENST00000357943 SCAF8Q9UPN6 1271 aaKnown RBP17.88■□□□□ 0.45
CCNE1-202ENST00000357943 NFIAQ12857 509 aa17.87■□□□□ 0.45
CCNE1-202ENST00000357943 ANGEL2Q5VTE6 544 aaKnown RBP17.87■□□□□ 0.45
CCNE1-202ENST00000357943 STRBPQ96SI9 672 aaKnown RBP17.87■□□□□ 0.45
CCNE1-202ENST00000357943 GGA3Q9NZ52 723 aa17.87■□□□□ 0.45
CCNE1-202ENST00000357943 WDHD1O75717 1129 aaPredicted RBP17.87■□□□□ 0.45
CCNE1-202ENST00000357943 PLCG2P16885 1265 aa17.87■□□□□ 0.45
CCNE1-202ENST00000357943 TEX11Q8IYF3 940 aa17.87■□□□□ 0.45
CCNE1-202ENST00000357943 SDR42E1Q8WUS8 393 aa17.87■□□□□ 0.45
CCNE1-202ENST00000357943 VEZTQ9HBM0 779 aa17.87■□□□□ 0.45
CCNE1-202ENST00000357943 PRKAB2O43741 272 aa17.86■□□□□ 0.45
CCNE1-202ENST00000357943 ZNF784Q8NCA9 323 aaPredicted RBP17.86■□□□□ 0.45
CCNE1-202ENST00000357943 TGFBRAP1Q8WUH2 860 aa17.86■□□□□ 0.45
CCNE1-202ENST00000357943 DDX4Q9NQI0 724 aaKnown RBP17.86■□□□□ 0.45
CCNE1-202ENST00000357943 TCP10L2B9ZVM9 353 aa17.85■□□□□ 0.45
CCNE1-202ENST00000357943 SGSM2O43147 1006 aa17.85■□□□□ 0.45
CCNE1-202ENST00000357943 PICALMQ13492 652 aa17.85■□□□□ 0.45
CCNE1-202ENST00000357943 VPS53Q5VIR6 699 aa17.85■□□□□ 0.45
CCNE1-202ENST00000357943 CERS3Q8IU89 383 aa17.85■□□□□ 0.45
CCNE1-202ENST00000357943 ZC3H15Q8WU90 426 aaKnown RBP17.85■□□□□ 0.45
CCNE1-202ENST00000357943 RUFY2Q8WXA3 655 aa17.85■□□□□ 0.45
CCNE1-202ENST00000357943 CCDC171Q6TFL3 1326 aa17.85■□□□□ 0.45
CCNE1-202ENST00000357943 CASC1Q6TDU7 716 aa17.84■□□□□ 0.45
CCNE1-202ENST00000357943 ESYT1Q9BSJ8 1104 aa17.84■□□□□ 0.45
CCNE1-202ENST00000357943 IDI2Q9BXS1 227 aa17.84■□□□□ 0.45
CCNE1-202ENST00000357943 CRNKL1Q9BZJ0 848 aaKnown RBP17.84■□□□□ 0.45
CCNE1-202ENST00000357943 TMOD2Q9NZR1 351 aa17.84■□□□□ 0.45
CCNE1-202ENST00000357943 FAM198AQ9UFP1 575 aa17.84■□□□□ 0.45
CCNE1-202ENST00000357943 PGAP2Q9UHJ9 254 aa17.84■□□□□ 0.45
CCNE1-202ENST00000357943 CLEC11AQ9Y240 323 aa17.84■□□□□ 0.45
CCNE1-202ENST00000357943 SLC4A4Q9Y6R1 1079 aa17.84■□□□□ 0.45
CCNE1-202ENST00000357943 KIF3CO14782 793 aa17.83■□□□□ 0.45
CCNE1-202ENST00000357943 FOXP2O15409 715 aa17.83■□□□□ 0.45
CCNE1-202ENST00000357943 TCP10Q12799 353 aa17.83■□□□□ 0.45
CCNE1-202ENST00000357943 MAPKAPK5Q8IW41 473 aa17.83■□□□□ 0.45
CCNE1-202ENST00000357943 RAD50Q92878 1312 aa17.83■□□□□ 0.45
CCNE1-202ENST00000357943 USP5P45974 858 aa17.83■□□□□ 0.44
CCNE1-202ENST00000357943 ZFPM1Q8IX07 1006 aa17.83■□□□□ 0.44
CCNE1-202ENST00000357943 FLT1P17948 1338 aa17.83■□□□□ 0.44
CCNE1-202ENST00000357943 PITPNM2Q9BZ72 1349 aa17.83■□□□□ 0.44
CCNE1-202ENST00000357943 GSG1L2A8MUP6 293 aa17.82■□□□□ 0.44
CCNE1-202ENST00000357943 PATL2C9JE40 543 aaKnown RBP17.82■□□□□ 0.44
CCNE1-202ENST00000357943 HSPD1P10809 573 aaKnown RBP17.82■□□□□ 0.44
CCNE1-202ENST00000357943 GNAT2P19087 354 aa17.82■□□□□ 0.44
CCNE1-202ENST00000357943 FKBP1CQ5VVH2 108 aa17.82■□□□□ 0.44
CCNE1-202ENST00000357943 LDHDQ86WU2 507 aa17.82■□□□□ 0.44
CCNE1-202ENST00000357943 APOBEC3FQ8IUX4 373 aaKnown RBP17.82■□□□□ 0.44
CCNE1-202ENST00000357943 DCPSQ96C86 337 aaKnown RBP17.82■□□□□ 0.44
CCNE1-202ENST00000357943 EPB41L4AQ9HCS5 686 aaPredicted RBP17.82■□□□□ 0.44
CCNE1-202ENST00000357943 DCP1AQ9NPI6 582 aaPredicted RBP17.82■□□□□ 0.44
CCNE1-202ENST00000357943 MKRN1Q9UHC7 482 aaKnown RBP17.82■□□□□ 0.44
CCNE1-202ENST00000357943 CNTNAP1P78357 1384 aa17.82■□□□□ 0.44
CCNE1-202ENST00000357943 APPP05067 770 aa17.81■□□□□ 0.44
CCNE1-202ENST00000357943 MFAP1P55081 439 aaKnown RBP17.81■□□□□ 0.44
CCNE1-202ENST00000357943 RASA3Q14644 834 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms