RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 DPCR1Q3MIW9 517 aa12.28□□□□□ -0.44
CAPN3-205ENST00000357568 ELOA2Q8IYF1 753 aaPredicted RBP12.28□□□□□ -0.44
CAPN3-205ENST00000357568 FBXO18Q8NFZ0 1043 aa12.28□□□□□ -0.44
CAPN3-205ENST00000357568 HNRNPLLQ8WVV9 542 aaKnown RBP12.28□□□□□ -0.44
CAPN3-205ENST00000357568 RASSF4Q9H2L5 321 aa12.28□□□□□ -0.44
CAPN3-205ENST00000357568 ARFGAP3Q9NP61 516 aa12.28□□□□□ -0.44
CAPN3-205ENST00000357568 PALLDQ8WX93 1383 aa12.28□□□□□ -0.44
CAPN3-205ENST00000357568 FAM237AA0A1B0GTK4 181 aa12.28□□□□□ -0.44
CAPN3-205ENST00000357568 DTNBO60941 627 aa12.28□□□□□ -0.44
CAPN3-205ENST00000357568 CYP21A2P08686 494 aa12.28□□□□□ -0.44
CAPN3-205ENST00000357568 EIF2S2P20042 333 aaKnown RBP12.28□□□□□ -0.44
CAPN3-205ENST00000357568 OAS2P29728 719 aaKnown RBP12.28□□□□□ -0.44
CAPN3-205ENST00000357568 SMC1AQ14683 1233 aaKnown RBP12.28□□□□□ -0.44
CAPN3-205ENST00000357568 ZNF790Q6PG37 636 aa12.28□□□□□ -0.44
CAPN3-205ENST00000357568 TTC5Q8N0Z6 440 aa12.28□□□□□ -0.44
CAPN3-205ENST00000357568 DDX11Q96FC9 970 aa12.28□□□□□ -0.44
CAPN3-205ENST00000357568 BOLA2Q9H3K6 86 aa12.28□□□□□ -0.44
CAPN3-205ENST00000357568 TUBE1Q9UJT0 475 aa12.28□□□□□ -0.44
CAPN3-205ENST00000357568 ZNF609O15014 1411 aa12.28□□□□□ -0.44
CAPN3-205ENST00000357568 KAT6BQ8WYB5 2073 aa12.27□□□□□ -0.44
CAPN3-205ENST00000357568 LAMB4A4D0S4 1761 aa12.27□□□□□ -0.44
CAPN3-205ENST00000357568 CARMIL3Q8ND23 1372 aa12.27□□□□□ -0.44
CAPN3-205ENST00000357568 CCDC151A5D8V7 595 aa12.27□□□□□ -0.44
CAPN3-205ENST00000357568 CMA1P23946 247 aa12.27□□□□□ -0.44
CAPN3-205ENST00000357568 VSTM4Q8IW00 320 aa12.27□□□□□ -0.44
CAPN3-205ENST00000357568 KAZALD1Q96I82 304 aa12.27□□□□□ -0.44
CAPN3-205ENST00000357568 SUCLG2Q96I99 432 aa12.27□□□□□ -0.44
CAPN3-205ENST00000357568 COPRSQ9NQ92 184 aa12.27□□□□□ -0.44
CAPN3-205ENST00000357568 SPEF2Q9C093 1822 aa12.27□□□□□ -0.45
CAPN3-205ENST00000357568 APBA3O96018 575 aa12.27□□□□□ -0.45
CAPN3-205ENST00000357568 IVLP07476 585 aa12.27□□□□□ -0.45
CAPN3-205ENST00000357568 BAG6P46379 1132 aa12.27□□□□□ -0.45
CAPN3-205ENST00000357568 ZSCAN26Q16670 478 aa12.27□□□□□ -0.45
CAPN3-205ENST00000357568 UPF1Q92900 1129 aaKnown RBP eCLIP12.27□□□□□ -0.45
CAPN3-205ENST00000357568 CCDC8Q9H0W5 538 aaPredicted RBP12.27□□□□□ -0.45
CAPN3-205ENST00000357568 HELLSQ9NRZ9 838 aa12.27□□□□□ -0.45
CAPN3-205ENST00000357568 MRFAP1Q9Y605 127 aa12.27□□□□□ -0.45
CAPN3-205ENST00000357568 TJP1Q07157 1748 aa12.27□□□□□ -0.45
CAPN3-205ENST00000357568 C5P01031 1676 aa12.27□□□□□ -0.45
CAPN3-205ENST00000357568 MAP3K15Q6ZN16 1313 aa12.26□□□□□ -0.45
CAPN3-205ENST00000357568 NDUFA8P51970 172 aa12.26□□□□□ -0.45
CAPN3-205ENST00000357568 SLC27A3Q5K4L6 730 aa12.26□□□□□ -0.45
CAPN3-205ENST00000357568 PTF1AQ7RTS3 328 aa12.26□□□□□ -0.45
CAPN3-205ENST00000357568 SMARCE1Q969G3 411 aa12.26□□□□□ -0.45
CAPN3-205ENST00000357568 FMNL2Q96PY5 1086 aa12.26□□□□□ -0.45
CAPN3-205ENST00000357568 HAUS7Q99871 368 aa12.26□□□□□ -0.45
CAPN3-205ENST00000357568 CARD6Q9BX69 1037 aa12.26□□□□□ -0.45
CAPN3-205ENST00000357568 YY1AP1Q9H869 796 aa12.26□□□□□ -0.45
CAPN3-205ENST00000357568 ASAP1Q9ULH1 1129 aa12.26□□□□□ -0.45
CAPN3-205ENST00000357568 MAP2K7O14733 419 aa12.26□□□□□ -0.45
CAPN3-205ENST00000357568 URI1O94763 535 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-205ENST00000357568 TUBBP07437 444 aa12.26□□□□□ -0.45
CAPN3-205ENST00000357568 KRBA2Q6ZNG9 492 aa12.26□□□□□ -0.45
CAPN3-205ENST00000357568 GOLGA1Q92805 767 aa12.26□□□□□ -0.45
CAPN3-205ENST00000357568 BICC1Q9H694 974 aaKnown RBP12.26□□□□□ -0.45
CAPN3-205ENST00000357568 TLR7Q9NYK1 1049 aaKnown RBP12.26□□□□□ -0.45
CAPN3-205ENST00000357568 COL5A3P25940 1745 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-205ENST00000357568 STX10O60499 249 aa12.25□□□□□ -0.45
CAPN3-205ENST00000357568 MYL5Q02045 173 aa12.25□□□□□ -0.45
CAPN3-205ENST00000357568 CEBPZQ03701 1054 aaKnown RBP12.25□□□□□ -0.45
CAPN3-205ENST00000357568 STK38Q15208 465 aa12.25□□□□□ -0.45
CAPN3-205ENST00000357568 FUT8Q9BYC5 575 aa12.25□□□□□ -0.45
CAPN3-205ENST00000357568 TAF1LQ8IZX4 1826 aa12.25□□□□□ -0.45
CAPN3-205ENST00000357568 VWA3AA6NCI4 1184 aa12.25□□□□□ -0.45
CAPN3-205ENST00000357568 NPHP1O15259 732 aa12.25□□□□□ -0.45
CAPN3-205ENST00000357568 SPTLC2O15270 562 aa12.25□□□□□ -0.45
CAPN3-205ENST00000357568 SASH3O75995 380 aa12.25□□□□□ -0.45
CAPN3-205ENST00000357568 CASQ1P31415 396 aa12.25□□□□□ -0.45
CAPN3-205ENST00000357568 TMEM139Q8IV31 216 aa12.25□□□□□ -0.45
CAPN3-205ENST00000357568 TEX13AQ9BXU3 409 aaPredicted RBP12.25□□□□□ -0.45
CAPN3-205ENST00000357568 TRIM34Q9BYJ4 488 aa12.25□□□□□ -0.45
CAPN3-205ENST00000357568 DHX16O60231 1041 aaKnown RBP12.24□□□□□ -0.45
CAPN3-205ENST00000357568 USP5P45974 858 aa12.24□□□□□ -0.45
CAPN3-205ENST00000357568 PPP2R3AQ06190 1150 aa12.24□□□□□ -0.45
CAPN3-205ENST00000357568 TBX2Q13207 712 aaPredicted RBP12.24□□□□□ -0.45
CAPN3-205ENST00000357568 SLC39A6Q13433 755 aa12.24□□□□□ -0.45
CAPN3-205ENST00000357568 NEK11Q8NG66 645 aa12.24□□□□□ -0.45
CAPN3-205ENST00000357568 FTOQ9C0B1 505 aaKnown RBP eCLIP12.24□□□□□ -0.45
CAPN3-205ENST00000357568 HSD3B7Q9H2F3 369 aa12.24□□□□□ -0.45
CAPN3-205ENST00000357568 PPP2R2CQ9Y2T4 447 aa12.24□□□□□ -0.45
CAPN3-205ENST00000357568 DDX60Q8IY21 1712 aaKnown RBP12.24□□□□□ -0.45
CAPN3-205ENST00000357568 ZNF202O95125 648 aa12.24□□□□□ -0.45
CAPN3-205ENST00000357568 PDIA3P30101 505 aaKnown RBP12.24□□□□□ -0.45
CAPN3-205ENST00000357568 ACTN2P35609 894 aa12.24□□□□□ -0.45
CAPN3-205ENST00000357568 TXLNAP40222 546 aa12.24□□□□□ -0.45
CAPN3-205ENST00000357568 UBASH3AP57075 661 aa12.24□□□□□ -0.45
CAPN3-205ENST00000357568 SF3A1Q15459 793 aaKnown RBP12.24□□□□□ -0.45
CAPN3-205ENST00000357568 STOX1Q6ZVD7 989 aa12.24□□□□□ -0.45
CAPN3-205ENST00000357568 CAMKK2Q96RR4 588 aa12.24□□□□□ -0.45
CAPN3-205ENST00000357568 LOC102724428A0A0B4J2F2 783 aa12.24□□□□□ -0.45
CAPN3-205ENST00000357568 POLR3GO15318 223 aaPredicted RBP12.24□□□□□ -0.45
CAPN3-205ENST00000357568 TOP1P11387 765 aaKnown RBP12.24□□□□□ -0.45
CAPN3-205ENST00000357568 SIK1P57059 783 aa12.24□□□□□ -0.45
CAPN3-205ENST00000357568 NOM1Q5C9Z4 860 aaKnown RBP12.24□□□□□ -0.45
CAPN3-205ENST00000357568 KBTBD3Q8NAB2 608 aa12.24□□□□□ -0.45
CAPN3-205ENST00000357568 DDX21Q9NR30 783 aaKnown RBP eCLIP12.24□□□□□ -0.45
CAPN3-205ENST00000357568 WDR19Q8NEZ3 1342 aa12.23□□□□□ -0.45
CAPN3-205ENST00000357568 NUP188Q5SRE5 1749 aa12.23□□□□□ -0.45
CAPN3-205ENST00000357568 A0A1B0GVL5 298 aa12.23□□□□□ -0.45
CAPN3-205ENST00000357568 MYO1CO00159 1063 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms