RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 PAX7P23759 505 aa9.5□□□□□ -0.89
COMMD9-202ENST00000355500 KBTBD3Q8NAB2 608 aa9.5□□□□□ -0.89
COMMD9-202ENST00000355500 PIGBQ92521 554 aa9.5□□□□□ -0.89
COMMD9-202ENST00000355500 POM121Q96HA1 1249 aa9.5□□□□□ -0.89
COMMD9-202ENST00000355500 CYP46A1Q9Y6A2 500 aa9.5□□□□□ -0.89
COMMD9-202ENST00000355500 RBM47A0AV96 593 aaKnown RBP9.49□□□□□ -0.89
COMMD9-202ENST00000355500 TCF3P15923 654 aa9.49□□□□□ -0.89
COMMD9-202ENST00000355500 NAP1L1P55209 391 aaKnown RBP9.49□□□□□ -0.89
COMMD9-202ENST00000355500 NMIQ13287 307 aaPredicted RBP9.49□□□□□ -0.89
COMMD9-202ENST00000355500 CWC27Q6UX04 472 aaKnown RBP9.49□□□□□ -0.89
COMMD9-202ENST00000355500 ACSBG1Q96GR2 724 aa9.49□□□□□ -0.89
COMMD9-202ENST00000355500 DSCC1Q9BVC3 393 aa9.49□□□□□ -0.89
COMMD9-202ENST00000355500 LMBRD1Q9NUN5 540 aa9.49□□□□□ -0.89
COMMD9-202ENST00000355500 SERPINA10Q9UK55 444 aa9.49□□□□□ -0.89
COMMD9-202ENST00000355500 ZDHHC9Q9Y397 364 aa9.49□□□□□ -0.89
COMMD9-202ENST00000355500 ATP6V1DQ9Y5K8 247 aa9.49□□□□□ -0.89
COMMD9-202ENST00000355500 RIC1Q4ADV7 1423 aa9.49□□□□□ -0.89
COMMD9-202ENST00000355500 ZFYP08048 801 aaPredicted RBP9.49□□□□□ -0.89
COMMD9-202ENST00000355500 CYP19A1P11511 503 aaPredicted RBP9.49□□□□□ -0.89
COMMD9-202ENST00000355500 LMNB1P20700 586 aa9.49□□□□□ -0.89
COMMD9-202ENST00000355500 IRX5P78411 483 aaPredicted RBP9.49□□□□□ -0.89
COMMD9-202ENST00000355500 TFCP2Q12800 502 aa9.49□□□□□ -0.89
COMMD9-202ENST00000355500 TSR1Q2NL82 804 aaKnown RBP9.49□□□□□ -0.89
COMMD9-202ENST00000355500 CREB3L3Q68CJ9 461 aa9.49□□□□□ -0.89
COMMD9-202ENST00000355500 LMBR1LQ6UX01 489 aa9.49□□□□□ -0.89
COMMD9-202ENST00000355500 TTLL7Q6ZT98 887 aa9.49□□□□□ -0.89
COMMD9-202ENST00000355500 LARGE2Q8N3Y3 721 aa9.49□□□□□ -0.89
COMMD9-202ENST00000355500 ENOX1Q8TC92 643 aaKnown RBP9.49□□□□□ -0.89
COMMD9-202ENST00000355500 UBXN4Q92575 508 aa9.49□□□□□ -0.89
COMMD9-202ENST00000355500 FSD1Q9BTV5 496 aa9.49□□□□□ -0.89
COMMD9-202ENST00000355500 CARMIL3Q8ND23 1372 aa9.49□□□□□ -0.89
COMMD9-202ENST00000355500 ERICH4A6NGS2 130 aa9.48□□□□□ -0.89
COMMD9-202ENST00000355500 CAPN15O75808 1086 aa9.48□□□□□ -0.89
COMMD9-202ENST00000355500 RSPH1Q8WYR4 309 aa9.48□□□□□ -0.89
COMMD9-202ENST00000355500 ZNF219Q9P2Y4 722 aaPredicted RBP9.48□□□□□ -0.89
COMMD9-202ENST00000355500 DIS3Q9Y2L1 958 aaKnown RBP9.48□□□□□ -0.89
COMMD9-202ENST00000355500 RBM8AQ9Y5S9 174 aaKnown RBP9.48□□□□□ -0.89
COMMD9-202ENST00000355500 SLC27A2O14975 620 aa9.48□□□□□ -0.89
COMMD9-202ENST00000355500 NLGN1Q8N2Q7 840 aa9.48□□□□□ -0.89
COMMD9-202ENST00000355500 RANBP17Q9H2T7 1088 aaKnown RBP9.48□□□□□ -0.89
COMMD9-202ENST00000355500 SBF1O95248 1867 aa9.48□□□□□ -0.89
COMMD9-202ENST00000355500 MYH15Q9Y2K3 1946 aa9.48□□□□□ -0.89
COMMD9-202ENST00000355500 TIAM2Q8IVF5 1701 aa9.48□□□□□ -0.89
COMMD9-202ENST00000355500 TAF5LO75529 589 aa9.47□□□□□ -0.89
COMMD9-202ENST00000355500 MCMDC2Q4G0Z9 681 aa9.47□□□□□ -0.89
COMMD9-202ENST00000355500 DDX54Q8TDD1 881 aaKnown RBP9.47□□□□□ -0.89
COMMD9-202ENST00000355500 FAM210AQ96ND0 272 aa9.47□□□□□ -0.89
COMMD9-202ENST00000355500 PDGFDQ9GZP0 370 aaPredicted RBP9.47□□□□□ -0.89
COMMD9-202ENST00000355500 TLR7Q9NYK1 1049 aaKnown RBP9.47□□□□□ -0.89
COMMD9-202ENST00000355500 WDR19Q8NEZ3 1342 aa9.47□□□□□ -0.89
COMMD9-202ENST00000355500 A1BGP04217 495 aa9.47□□□□□ -0.89
COMMD9-202ENST00000355500 AK2P54819 239 aa9.47□□□□□ -0.89
COMMD9-202ENST00000355500 PTH1RQ03431 593 aa9.47□□□□□ -0.89
COMMD9-202ENST00000355500 NYAP1Q6ZVC0 841 aa9.47□□□□□ -0.89
COMMD9-202ENST00000355500 RASEFQ8IZ41 740 aa9.47□□□□□ -0.89
COMMD9-202ENST00000355500 ZGPATQ8N5A5 531 aaKnown RBP9.47□□□□□ -0.89
COMMD9-202ENST00000355500 CCDC8Q9H0W5 538 aaPredicted RBP9.47□□□□□ -0.89
COMMD9-202ENST00000355500 CXorf56Q9H5V9 222 aa9.47□□□□□ -0.89
COMMD9-202ENST00000355500 PDRG1Q9NUG6 133 aa9.47□□□□□ -0.89
COMMD9-202ENST00000355500 MYH14Q7Z406 1995 aaKnown RBP9.47□□□□□ -0.89
COMMD9-202ENST00000355500 LOC102724428A0A0B4J2F2 783 aa9.47□□□□□ -0.89
COMMD9-202ENST00000355500 CCDC172P0C7W6 258 aa9.47□□□□□ -0.89
COMMD9-202ENST00000355500 RPS6KB1P23443 525 aa9.47□□□□□ -0.89
COMMD9-202ENST00000355500 HOXD11P31277 338 aaPredicted RBP9.47□□□□□ -0.89
COMMD9-202ENST00000355500 SIK1P57059 783 aa9.47□□□□□ -0.89
COMMD9-202ENST00000355500 ZMYM1Q5SVZ6 1142 aa9.47□□□□□ -0.89
COMMD9-202ENST00000355500 AKAP11Q9UKA4 1901 aa9.46□□□□□ -0.89
COMMD9-202ENST00000355500 ZMYM6O95789 1325 aa9.46□□□□□ -0.89
COMMD9-202ENST00000355500 A0A0D9SFI3 127 aa9.46□□□□□ -0.89
COMMD9-202ENST00000355500 LETM1O95202 739 aaPredicted RBP9.46□□□□□ -0.89
COMMD9-202ENST00000355500 PDCP20941 246 aa9.46□□□□□ -0.89
COMMD9-202ENST00000355500 FLT3P36888 993 aa9.46□□□□□ -0.89
COMMD9-202ENST00000355500 PIP4K2AP48426 406 aaPredicted RBP9.46□□□□□ -0.89
COMMD9-202ENST00000355500 AGXT2Q9BYV1 514 aa9.46□□□□□ -0.89
COMMD9-202ENST00000355500 MKRN1Q9UHC7 482 aaKnown RBP9.46□□□□□ -0.89
COMMD9-202ENST00000355500 WDR90Q96KV7 1748 aa9.46□□□□□ -0.9
COMMD9-202ENST00000355500 ATP5J2-PTCD1G3V325 749 aa9.46□□□□□ -0.9
COMMD9-202ENST00000355500 PTCD1O75127 700 aaKnown RBP9.46□□□□□ -0.9
COMMD9-202ENST00000355500 RPS6KA4O75676 772 aa9.46□□□□□ -0.9
COMMD9-202ENST00000355500 CAPN2P17655 700 aa9.46□□□□□ -0.9
COMMD9-202ENST00000355500 CASTP20810 708 aaKnown RBP9.46□□□□□ -0.9
COMMD9-202ENST00000355500 SND1Q7KZF4 910 aaKnown RBP eCLIP9.46□□□□□ -0.9
COMMD9-202ENST00000355500 ZNF34Q8IZ26 560 aa9.46□□□□□ -0.9
COMMD9-202ENST00000355500 SYAP1Q96A49 352 aaPredicted RBP9.46□□□□□ -0.9
COMMD9-202ENST00000355500 JADE2Q9NQC1 790 aa9.46□□□□□ -0.9
COMMD9-202ENST00000355500 PAG1Q9NWQ8 432 aa9.46□□□□□ -0.9
COMMD9-202ENST00000355500 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.46□□□□□ -0.9
COMMD9-202ENST00000355500 TPM2P07951 284 aa9.45□□□□□ -0.9
COMMD9-202ENST00000355500 TGFB3P10600 412 aa9.45□□□□□ -0.9
COMMD9-202ENST00000355500 HMGN5P82970 282 aaKnown RBP9.45□□□□□ -0.9
COMMD9-202ENST00000355500 CCDC57Q2TAC2 916 aa9.45□□□□□ -0.9
COMMD9-202ENST00000355500 PARP10Q53GL7 1025 aa9.45□□□□□ -0.9
COMMD9-202ENST00000355500 PRPF40BQ6NWY9 871 aaKnown RBP9.45□□□□□ -0.9
COMMD9-202ENST00000355500 NLRP10Q86W26 655 aa9.45□□□□□ -0.9
COMMD9-202ENST00000355500 DNAJC10Q8IXB1 793 aa9.45□□□□□ -0.9
COMMD9-202ENST00000355500 NEUROD6Q96NK8 337 aa9.45□□□□□ -0.9
COMMD9-202ENST00000355500 MAP7D2Q96T17 732 aa9.45□□□□□ -0.9
COMMD9-202ENST00000355500 LLPHQ9BRT6 129 aaKnown RBP9.45□□□□□ -0.9
COMMD9-202ENST00000355500 NBPF3Q9H094 633 aa9.45□□□□□ -0.9
COMMD9-202ENST00000355500 SIL1Q9H173 461 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms