RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 UBXN1Q04323 297 aa8.96□□□□□ -0.98
HTT-201ENST00000355072 FSIP1Q8NA03 581 aa8.96□□□□□ -0.98
HTT-201ENST00000355072 BBOF1Q8ND07 529 aa8.96□□□□□ -0.98
HTT-201ENST00000355072 SDCCAG3Q96C92 435 aa8.96□□□□□ -0.98
HTT-201ENST00000355072 PPP1R9BQ96SB3 815 aa8.96□□□□□ -0.98
HTT-201ENST00000355072 TRIM6Q9C030 488 aaPredicted RBP8.96□□□□□ -0.98
HTT-201ENST00000355072 F13A1P00488 732 aa8.96□□□□□ -0.98
HTT-201ENST00000355072 MCTP2Q6DN12 878 aa8.96□□□□□ -0.98
HTT-201ENST00000355072 SDCCAG8Q86SQ7 713 aaPredicted RBP8.96□□□□□ -0.98
HTT-201ENST00000355072 PPP4R1Q8TF05 950 aa8.96□□□□□ -0.98
HTT-201ENST00000355072 GOLGA4Q13439 2230 aaKnown RBP8.96□□□□□ -0.98
HTT-201ENST00000355072 KCNH5Q8NCM2 988 aa8.96□□□□□ -0.98
HTT-201ENST00000355072 TEKT1Q969V4 418 aa8.96□□□□□ -0.98
HTT-201ENST00000355072 SETD1BQ9UPS6 1966 aaKnown RBP8.96□□□□□ -0.98
HTT-201ENST00000355072 COG7P83436 770 aa8.96□□□□□ -0.98
HTT-201ENST00000355072 CDC42BPAQ5VT25 1732 aa8.96□□□□□ -0.98
HTT-201ENST00000355072 PFDN1O60925 122 aa8.96□□□□□ -0.98
HTT-201ENST00000355072 IDEP14735 1019 aa8.96□□□□□ -0.98
HTT-201ENST00000355072 SRRM1Q8IYB3 904 aaKnown RBP8.96□□□□□ -0.98
HTT-201ENST00000355072 FBXW7Q969H0 707 aa8.96□□□□□ -0.98
HTT-201ENST00000355072 CNNM1Q9NRU3 951 aa8.96□□□□□ -0.98
HTT-201ENST00000355072 MICAL3Q7RTP6 2002 aa8.96□□□□□ -0.98
HTT-201ENST00000355072 IRX1P78414 480 aaPredicted RBP8.96□□□□□ -0.98
HTT-201ENST00000355072 ANKRD20A3Q5VUR7 823 aa8.96□□□□□ -0.98
HTT-201ENST00000355072 MMS22LQ6ZRQ5 1243 aa8.96□□□□□ -0.98
HTT-201ENST00000355072 MYH11P35749 1972 aa8.96□□□□□ -0.98
HTT-201ENST00000355072 STX10O60499 249 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 PBRM1Q86U86 1689 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 DCTN3O75935 186 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 NR1H3Q13133 447 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 VPS52Q8N1B4 723 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 ZNF449Q6P9G9 518 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 TEX13AQ9BXU3 409 aaPredicted RBP8.95□□□□□ -0.98
HTT-201ENST00000355072 ANKRD20A4Q4UJ75 823 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 ANKRD20A8PQ5CZ79 823 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 ANKRD20A2Q5SQ80 823 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 ANKRD20A1Q5TYW2 823 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 RETREG2Q8NC44 543 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 NDE1Q9NXR1 346 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 SCOCQ9UIL1 159 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 ST5P78524 1137 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 EPSTI1Q96J88 318 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 KIF2CQ99661 725 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 PSDA5PKW4 1024 aaPredicted RBP8.95□□□□□ -0.98
HTT-201ENST00000355072 ZNF213O14771 459 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 RASGRF2O14827 1237 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 MTIF2P46199 727 aaKnown RBP8.95□□□□□ -0.98
HTT-201ENST00000355072 LZICQ8WZA0 190 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 ZEB2O60315 1214 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 TYRO3Q06418 890 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 CUL1Q13616 776 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 PPP2R5AQ15172 486 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 BICD1Q96G01 975 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 CAMSAP1Q5T5Y3 1602 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 ZFXP17010 805 aaPredicted RBP8.95□□□□□ -0.98
HTT-201ENST00000355072 PDXDC1Q6P996 788 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 MFSD6Q6ZSS7 791 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 ECHDC1Q9NTX5 307 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 TRIM27P14373 513 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 MYH6P13533 1939 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 IARSP41252 1262 aaKnown RBP8.95□□□□□ -0.98
HTT-201ENST00000355072 METAP2P50579 478 aaKnown RBP eCLIP8.95□□□□□ -0.98
HTT-201ENST00000355072 KRR1Q13601 381 aaKnown RBP8.95□□□□□ -0.98
HTT-201ENST00000355072 NFE2L2Q16236 605 aa8.95□□□□□ -0.98
HTT-201ENST00000355072 BCRP11274 1271 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 PPP1R7Q15435 360 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 GSTA5Q7RTV2 222 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 MOV10L1Q9BXT6 1211 aaKnown RBP8.94□□□□□ -0.98
HTT-201ENST00000355072 DBF4Q9UBU7 674 aaPredicted RBP8.94□□□□□ -0.98
HTT-201ENST00000355072 GIPC1O14908 333 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 IGHMBP2P38935 993 aaKnown RBP8.94□□□□□ -0.98
HTT-201ENST00000355072 NONOQ15233 471 aaKnown RBP eCLIP8.94□□□□□ -0.98
HTT-201ENST00000355072 SCINQ9Y6U3 715 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 RAD21O60216 631 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 SMIM24O75264 130 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 TFIP11Q9UBB9 837 aaKnown RBP8.94□□□□□ -0.98
HTT-201ENST00000355072 SOX12O15370 315 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 NSD3Q9BZ95 1437 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 SERPINI1Q99574 410 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 COPG1Q9Y678 874 aaKnown RBP8.94□□□□□ -0.98
HTT-201ENST00000355072 PLCG2P16885 1265 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 EVCP57679 992 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 PPP1R9AQ9ULJ8 1098 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 PAIP2BQ9ULR5 123 aaKnown RBP8.94□□□□□ -0.98
HTT-201ENST00000355072 STARD3NLO95772 234 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 PNMA2Q9UL42 364 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 PRPF31Q8WWY3 499 aaKnown RBP8.94□□□□□ -0.98
HTT-201ENST00000355072 ANKRD2Q9GZV1 360 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 RTEL1-TNFRSF6BF6WH68 1400 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 GOLGA8TH3BQL2 631 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 BAG3O95817 575 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 GOLGA8HP0CJ92 632 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 VTI1AQ96AJ9 217 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 BABAM1Q9NWV8 329 aa8.94□□□□□ -0.98
HTT-201ENST00000355072 SLC8A3P57103 927 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 CATSPER1Q8NEC5 780 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 NEK11Q8NG66 645 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 PFDN6O15212 129 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 IFIT1P09914 478 aaKnown RBP8.93□□□□□ -0.98
HTT-201ENST00000355072 FKBP4Q02790 459 aaKnown RBP eCLIP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms