RNA–Protein interactions for RNA: ENST00000353487.6

SPPL3-201, Transcript of signal peptide peptidase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL3, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-201ENST00000353487 ZMYND10O75800 440 aa16.24■□□□□ 0.19
SPPL3-201ENST00000353487 TIMM10P62072 90 aa16.24■□□□□ 0.19
SPPL3-201ENST00000353487 TBC1D2BQ9UPU7 963 aa16.24■□□□□ 0.19
SPPL3-201ENST00000353487 OPA1O60313 960 aa16.24■□□□□ 0.19
SPPL3-201ENST00000353487 SPECC1LQ69YQ0 1117 aa16.24■□□□□ 0.19
SPPL3-201ENST00000353487 PFKFB1P16118 471 aa16.24■□□□□ 0.19
SPPL3-201ENST00000353487 ACTN3Q08043 901 aaPredicted RBP16.24■□□□□ 0.19
SPPL3-201ENST00000353487 PPRC1Q5VV67 1664 aaKnown RBP16.24■□□□□ 0.19
SPPL3-201ENST00000353487 FBXO18Q8NFZ0 1043 aa16.24■□□□□ 0.19
SPPL3-201ENST00000353487 PSMB7Q99436 277 aa16.24■□□□□ 0.19
SPPL3-201ENST00000353487 GJB4Q9NTQ9 266 aa16.24■□□□□ 0.19
SPPL3-201ENST00000353487 MAPK8IP1Q9UQF2 711 aa16.24■□□□□ 0.19
SPPL3-201ENST00000353487 IFIT3O14879 490 aaKnown RBP16.23■□□□□ 0.19
SPPL3-201ENST00000353487 CDC25BP30305 580 aa16.23■□□□□ 0.19
SPPL3-201ENST00000353487 STAMQ92783 540 aa16.23■□□□□ 0.19
SPPL3-201ENST00000353487 PPANQ9NQ55 473 aaKnown RBP16.23■□□□□ 0.19
SPPL3-201ENST00000353487 MYO1BO43795 1136 aa16.23■□□□□ 0.19
SPPL3-201ENST00000353487 CCDC57Q2TAC2 916 aa16.23■□□□□ 0.19
SPPL3-201ENST00000353487 VPS16Q9H269 839 aa16.23■□□□□ 0.19
SPPL3-201ENST00000353487 MLH3Q9UHC1 1453 aa16.23■□□□□ 0.19
SPPL3-201ENST00000353487 STIM1Q13586 685 aa16.23■□□□□ 0.19
SPPL3-201ENST00000353487 NEDD9Q14511 834 aa16.23■□□□□ 0.19
SPPL3-201ENST00000353487 LRRN4CLQ8ND94 238 aa16.23■□□□□ 0.19
SPPL3-201ENST00000353487 MAP4K1Q92918 833 aa16.23■□□□□ 0.19
SPPL3-201ENST00000353487 UBAC1Q9BSL1 405 aa16.23■□□□□ 0.19
SPPL3-201ENST00000353487 PIP4K2BP78356 416 aa16.22■□□□□ 0.19
SPPL3-201ENST00000353487 E4F1Q66K89 784 aaPredicted RBP16.22■□□□□ 0.19
SPPL3-201ENST00000353487 GOLPH3LQ9H4A5 285 aa16.22■□□□□ 0.19
SPPL3-201ENST00000353487 COBLO75128 1261 aa16.22■□□□□ 0.19
SPPL3-201ENST00000353487 ZC3H6P61129 1189 aaKnown RBP16.22■□□□□ 0.19
SPPL3-201ENST00000353487 ADALQ6DHV7 355 aa16.22■□□□□ 0.19
SPPL3-201ENST00000353487 CLIC6Q96NY7 704 aa16.22■□□□□ 0.19
SPPL3-201ENST00000353487 SLF1Q9BQI6 1058 aa16.22■□□□□ 0.19
SPPL3-201ENST00000353487 CNNM1Q9NRU3 951 aa16.22■□□□□ 0.19
SPPL3-201ENST00000353487 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.22■□□□□ 0.19
SPPL3-201ENST00000353487 SLC12A7Q9Y666 1083 aa16.22■□□□□ 0.19
SPPL3-201ENST00000353487 ABCC3O15438 1527 aa16.22■□□□□ 0.19
SPPL3-201ENST00000353487 A0A087WUV0 522 aaPredicted RBP16.22■□□□□ 0.19
SPPL3-201ENST00000353487 KCNQ3O43525 872 aa16.22■□□□□ 0.19
SPPL3-201ENST00000353487 KSR2Q6VAB6 950 aa16.22■□□□□ 0.19
SPPL3-201ENST00000353487 COPS6Q7L5N1 327 aa16.22■□□□□ 0.19
SPPL3-201ENST00000353487 PHKBQ93100 1093 aa16.22■□□□□ 0.19
SPPL3-201ENST00000353487 RNASE9P60153 205 aaKnown RBP16.21■□□□□ 0.19
SPPL3-201ENST00000353487 CCZ1BP86790 482 aa16.21■□□□□ 0.19
SPPL3-201ENST00000353487 CCZ1P86791 482 aaPredicted RBP16.21■□□□□ 0.19
SPPL3-201ENST00000353487 CCDC96Q2M329 555 aa16.21■□□□□ 0.19
SPPL3-201ENST00000353487 CCDC170Q8IYT3 715 aa16.21■□□□□ 0.19
SPPL3-201ENST00000353487 NCOA7Q8NI08 942 aa16.21■□□□□ 0.19
SPPL3-201ENST00000353487 LGR6Q9HBX8 967 aa16.21■□□□□ 0.19
SPPL3-201ENST00000353487 RRAGBQ5VZM2 374 aa16.21■□□□□ 0.19
SPPL3-201ENST00000353487 CC2D1AQ6P1N0 951 aaPredicted RBP16.21■□□□□ 0.19
SPPL3-201ENST00000353487 LMBR1LQ6UX01 489 aa16.21■□□□□ 0.19
SPPL3-201ENST00000353487 SUCLG2Q96I99 432 aa16.21■□□□□ 0.19
SPPL3-201ENST00000353487 KCNH3Q9ULD8 1083 aa16.21■□□□□ 0.19
SPPL3-201ENST00000353487 GOLGA6BA6NDN3 693 aa16.21■□□□□ 0.19
SPPL3-201ENST00000353487 POLR2DO15514 142 aaKnown RBP16.21■□□□□ 0.19
SPPL3-201ENST00000353487 CLTAP09496 248 aa16.21■□□□□ 0.19
SPPL3-201ENST00000353487 TMEM67Q5HYA8 995 aa16.21■□□□□ 0.19
SPPL3-201ENST00000353487 SND1Q7KZF4 910 aaKnown RBP eCLIP16.21■□□□□ 0.19
SPPL3-201ENST00000353487 EFCAB13Q8IY85 973 aa16.21■□□□□ 0.19
SPPL3-201ENST00000353487 XAGE3Q8WTP9 111 aa16.21■□□□□ 0.19
SPPL3-201ENST00000353487 RESTQ13127 1097 aa16.21■□□□□ 0.18
SPPL3-201ENST00000353487 NECTIN1Q15223 517 aa16.21■□□□□ 0.18
SPPL3-201ENST00000353487 TDRD12Q587J7 1177 aaKnown RBP16.21■□□□□ 0.18
SPPL3-201ENST00000353487 CFAP58Q5T655 872 aa16.21■□□□□ 0.18
SPPL3-201ENST00000353487 CTCFLQ8NI51 663 aaPredicted RBP16.21■□□□□ 0.18
SPPL3-201ENST00000353487 SELENOSQ9BQE4 189 aa16.21■□□□□ 0.18
SPPL3-201ENST00000353487 TRIM6Q9C030 488 aaPredicted RBP16.21■□□□□ 0.18
SPPL3-201ENST00000353487 KIDINS220Q9ULH0 1771 aa16.21■□□□□ 0.18
SPPL3-201ENST00000353487 ABCA9Q8IUA7 1624 aa16.2■□□□□ 0.18
SPPL3-201ENST00000353487 SSRP1Q08945 709 aaKnown RBP16.2■□□□□ 0.18
SPPL3-201ENST00000353487 NAA16Q6N069 864 aaPredicted RBP16.2■□□□□ 0.18
SPPL3-201ENST00000353487 FUCA2Q9BTY2 467 aa16.2■□□□□ 0.18
SPPL3-201ENST00000353487 MYL10Q9BUA6 226 aa16.2■□□□□ 0.18
SPPL3-201ENST00000353487 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.2■□□□□ 0.18
SPPL3-201ENST00000353487 MACROD2A1Z1Q3 448 aa16.2■□□□□ 0.18
SPPL3-201ENST00000353487 ARMCX5Q6P1M9 558 aa16.2■□□□□ 0.18
SPPL3-201ENST00000353487 NAPGQ99747 312 aaPredicted RBP16.2■□□□□ 0.18
SPPL3-201ENST00000353487 METP08581 1390 aa16.2■□□□□ 0.18
SPPL3-201ENST00000353487 E7EVH7 732 aa16.2■□□□□ 0.18
SPPL3-201ENST00000353487 MYSM1Q5VVJ2 828 aa16.2■□□□□ 0.18
SPPL3-201ENST00000353487 KCTD16Q68DU8 428 aa16.2■□□□□ 0.18
SPPL3-201ENST00000353487 NUTM2AQ8IVF1 878 aaPredicted RBP16.2■□□□□ 0.18
SPPL3-201ENST00000353487 AIDAQ96BJ3 306 aa16.2■□□□□ 0.18
SPPL3-201ENST00000353487 IRX2Q9BZI1 471 aaPredicted RBP16.2■□□□□ 0.18
SPPL3-201ENST00000353487 PAG1Q9NWQ8 432 aa16.2■□□□□ 0.18
SPPL3-201ENST00000353487 MINDY4BA8MYZ0 360 aa16.19■□□□□ 0.18
SPPL3-201ENST00000353487 TMEM232C9JQI7 657 aa16.19■□□□□ 0.18
SPPL3-201ENST00000353487 PPP1R7Q15435 360 aa16.19■□□□□ 0.18
SPPL3-201ENST00000353487 TADA2BQ86TJ2 420 aa16.19■□□□□ 0.18
SPPL3-201ENST00000353487 RABGGTAQ92696 567 aa16.19■□□□□ 0.18
SPPL3-201ENST00000353487 PRM3Q9NNZ6 103 aa16.19■□□□□ 0.18
SPPL3-201ENST00000353487 INO80Q9ULG1 1556 aaPredicted RBP16.19■□□□□ 0.18
SPPL3-201ENST00000353487 PRPF4BQ13523 1007 aaKnown RBP16.19■□□□□ 0.18
SPPL3-201ENST00000353487 BRD3Q15059 726 aa16.19■□□□□ 0.18
SPPL3-201ENST00000353487 RPUSD2Q8IZ73 545 aaKnown RBP16.19■□□□□ 0.18
SPPL3-201ENST00000353487 CYP21A2P08686 494 aa16.19■□□□□ 0.18
SPPL3-201ENST00000353487 TRIM21P19474 475 aaKnown RBP16.19■□□□□ 0.18
SPPL3-201ENST00000353487 PLA2G4AP47712 749 aa16.19■□□□□ 0.18
SPPL3-201ENST00000353487 IFT88Q13099 833 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms