RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 L2HGDHQ9H9P8 463 aa28.37■■■□□ 2.13
CPNE1-202ENST00000352393 MORC2Q9Y6X9 1032 aaPredicted RBP28.37■■■□□ 2.13
CPNE1-202ENST00000352393 SYKP43405 635 aa28.37■■■□□ 2.13
CPNE1-202ENST00000352393 FANCCQ00597 558 aa28.37■■■□□ 2.13
CPNE1-202ENST00000352393 KRT40Q6A162 431 aa28.37■■■□□ 2.13
CPNE1-202ENST00000352393 ZHX1Q9UKY1 873 aaPredicted RBP28.37■■■□□ 2.13
CPNE1-202ENST00000352393 CDHR2Q9BYE9 1310 aa28.37■■■□□ 2.13
CPNE1-202ENST00000352393 ANKRD36CQ5JPF3 1778 aa28.36■■■□□ 2.13
CPNE1-202ENST00000352393 KMT5BQ4FZB7 885 aa28.36■■■□□ 2.13
CPNE1-202ENST00000352393 METTL24Q5JXM2 366 aa28.36■■■□□ 2.13
CPNE1-202ENST00000352393 IL2RBP14784 551 aa28.36■■■□□ 2.13
CPNE1-202ENST00000352393 APOA5Q6Q788 366 aa28.36■■■□□ 2.13
CPNE1-202ENST00000352393 SHC4Q6S5L8 630 aa28.36■■■□□ 2.13
CPNE1-202ENST00000352393 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.36■■■□□ 2.13
CPNE1-202ENST00000352393 PRDM11Q9NQV5 511 aa28.36■■■□□ 2.13
CPNE1-202ENST00000352393 CHD4Q14839 1912 aa28.35■■■□□ 2.13
CPNE1-202ENST00000352393 LMOD1P29536 600 aaPredicted RBP28.35■■■□□ 2.13
CPNE1-202ENST00000352393 KIF6Q6ZMV9 814 aa28.35■■■□□ 2.13
CPNE1-202ENST00000352393 JMYQ8N9B5 988 aa28.35■■■□□ 2.13
CPNE1-202ENST00000352393 MAP3K14Q99558 947 aa28.35■■■□□ 2.13
CPNE1-202ENST00000352393 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.35■■■□□ 2.13
CPNE1-202ENST00000352393 V9GYY5 206 aaPredicted RBP28.35■■■□□ 2.13
CPNE1-202ENST00000352393 LRP6O75581 1613 aa28.35■■■□□ 2.13
CPNE1-202ENST00000352393 ELF2Q15723 593 aa28.34■■■□□ 2.13
CPNE1-202ENST00000352393 ARAP2Q8WZ64 1704 aa28.34■■■□□ 2.13
CPNE1-202ENST00000352393 CDC27P30260 824 aa28.34■■■□□ 2.13
CPNE1-202ENST00000352393 UBE3CQ15386 1083 aa28.34■■■□□ 2.13
CPNE1-202ENST00000352393 SLC9C2Q5TAH2 1124 aa28.34■■■□□ 2.13
CPNE1-202ENST00000352393 PIH1D3Q9NQM4 214 aaKnown RBP28.34■■■□□ 2.13
CPNE1-202ENST00000352393 ZNF330Q9Y3S2 320 aaPredicted RBP28.34■■■□□ 2.13
CPNE1-202ENST00000352393 ATP1A3P13637 1013 aa28.33■■■□□ 2.13
CPNE1-202ENST00000352393 TTF1Q15361 905 aaPredicted RBP28.33■■■□□ 2.13
CPNE1-202ENST00000352393 RESP18Q5W5W9 173 aa28.33■■■□□ 2.13
CPNE1-202ENST00000352393 VGLL2Q8N8G2 317 aa28.33■■■□□ 2.13
CPNE1-202ENST00000352393 NRDCO43847 1150 aa28.33■■■□□ 2.13
CPNE1-202ENST00000352393 SENP2Q9HC62 589 aa28.33■■■□□ 2.13
CPNE1-202ENST00000352393 ABCA3Q99758 1704 aa28.33■■■□□ 2.12
CPNE1-202ENST00000352393 TUBB4AP04350 444 aa28.32■■■□□ 2.12
CPNE1-202ENST00000352393 MYL5Q02045 173 aa28.32■■■□□ 2.12
CPNE1-202ENST00000352393 NTRK3Q16288 839 aa28.32■■■□□ 2.12
CPNE1-202ENST00000352393 FBXO38Q6PIJ6 1188 aa28.32■■■□□ 2.12
CPNE1-202ENST00000352393 CPLX2Q6PUV4 134 aaKnown RBP28.32■■■□□ 2.12
CPNE1-202ENST00000352393 TMEM87BQ96K49 555 aa28.32■■■□□ 2.12
CPNE1-202ENST00000352393 BCL11BQ9C0K0 894 aaPredicted RBP28.32■■■□□ 2.12
CPNE1-202ENST00000352393 LRP5O75197 1615 aa28.32■■■□□ 2.12
CPNE1-202ENST00000352393 TIAM2Q8IVF5 1701 aa28.32■■■□□ 2.12
CPNE1-202ENST00000352393 KIF20AO95235 890 aa28.31■■■□□ 2.12
CPNE1-202ENST00000352393 RXRAP19793 462 aa28.31■■■□□ 2.12
CPNE1-202ENST00000352393 ITGA6P23229 1130 aa28.31■■■□□ 2.12
CPNE1-202ENST00000352393 LDHAL6AQ6ZMR3 332 aa28.31■■■□□ 2.12
CPNE1-202ENST00000352393 PHKBQ93100 1093 aa28.31■■■□□ 2.12
CPNE1-202ENST00000352393 GREM2Q9H772 168 aa28.31■■■□□ 2.12
CPNE1-202ENST00000352393 GABPB1Q06547 395 aaPredicted RBP28.31■■■□□ 2.12
CPNE1-202ENST00000352393 CCDC93Q567U6 631 aa28.31■■■□□ 2.12
CPNE1-202ENST00000352393 ISM2Q6H9L7 571 aa28.31■■■□□ 2.12
CPNE1-202ENST00000352393 TTLL11Q8NHH1 800 aa28.31■■■□□ 2.12
CPNE1-202ENST00000352393 CARD10Q9BWT7 1032 aa28.31■■■□□ 2.12
CPNE1-202ENST00000352393 DOCK2Q92608 1830 aa28.3■■■□□ 2.12
CPNE1-202ENST00000352393 MAP3K15Q6ZN16 1313 aa28.3■■■□□ 2.12
CPNE1-202ENST00000352393 B4E1Z4 1266 aa28.3■■■□□ 2.12
CPNE1-202ENST00000352393 RANBP6O60518 1105 aaKnown RBP28.3■■■□□ 2.12
CPNE1-202ENST00000352393 MICU3Q86XE3 530 aa28.3■■■□□ 2.12
CPNE1-202ENST00000352393 SYNE4Q8N205 404 aa28.3■■■□□ 2.12
CPNE1-202ENST00000352393 IGDCC4Q8TDY8 1250 aa28.3■■■□□ 2.12
CPNE1-202ENST00000352393 ZNF532Q9HCE3 1301 aa28.3■■■□□ 2.12
CPNE1-202ENST00000352393 PNOCQ13519 176 aa28.3■■■□□ 2.12
CPNE1-202ENST00000352393 SYT10Q6XYQ8 523 aa28.3■■■□□ 2.12
CPNE1-202ENST00000352393 GIGYF2Q6Y7W6 1299 aaKnown RBP28.3■■■□□ 2.12
CPNE1-202ENST00000352393 SGMS1Q86VZ5 419 aa28.3■■■□□ 2.12
CPNE1-202ENST00000352393 DNAJC10Q8IXB1 793 aa28.3■■■□□ 2.12
CPNE1-202ENST00000352393 LY9Q9HBG7 655 aa28.3■■■□□ 2.12
CPNE1-202ENST00000352393 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.3■■■□□ 2.12
CPNE1-202ENST00000352393 FAM53CQ9NYF3 392 aa28.3■■■□□ 2.12
CPNE1-202ENST00000352393 STK36Q9NRP7 1315 aa28.29■■■□□ 2.12
CPNE1-202ENST00000352393 ZBTB43O43298 467 aa28.29■■■□□ 2.12
CPNE1-202ENST00000352393 CBFA2T2O43439 604 aa28.29■■■□□ 2.12
CPNE1-202ENST00000352393 CUTAO60888 179 aa28.29■■■□□ 2.12
CPNE1-202ENST00000352393 PDE6AP16499 860 aa28.29■■■□□ 2.12
CPNE1-202ENST00000352393 METTL16Q86W50 562 aaKnown RBP28.29■■■□□ 2.12
CPNE1-202ENST00000352393 DPF2Q92785 391 aa28.29■■■□□ 2.12
CPNE1-202ENST00000352393 FAM217BQ9NTX9 383 aaPredicted RBP28.29■■■□□ 2.12
CPNE1-202ENST00000352393 UBN2Q6ZU65 1347 aa28.28■■■□□ 2.12
CPNE1-202ENST00000352393 TCRBV5S4A2TA0A5A2 114 aa28.28■■■□□ 2.12
CPNE1-202ENST00000352393 CTSWP56202 376 aa28.28■■■□□ 2.12
CPNE1-202ENST00000352393 GNL2Q13823 731 aaKnown RBP28.28■■■□□ 2.12
CPNE1-202ENST00000352393 TMOD3Q9NYL9 352 aa28.28■■■□□ 2.12
CPNE1-202ENST00000352393 MYO1BO43795 1136 aa28.28■■■□□ 2.12
CPNE1-202ENST00000352393 IDH1O75874 414 aaKnown RBP28.28■■■□□ 2.12
CPNE1-202ENST00000352393 ARID4AP29374 1257 aaPredicted RBP28.28■■■□□ 2.12
CPNE1-202ENST00000352393 NLRP10Q86W26 655 aa28.28■■■□□ 2.12
CPNE1-202ENST00000352393 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.28■■■□□ 2.12
CPNE1-202ENST00000352393 TEX13AQ9BXU3 409 aaPredicted RBP28.28■■■□□ 2.12
CPNE1-202ENST00000352393 XIRP1Q702N8 1843 aaKnown RBP28.28■■■□□ 2.12
CPNE1-202ENST00000352393 GOLGA8AA7E2F4 631 aa28.27■■■□□ 2.12
CPNE1-202ENST00000352393 APPP05067 770 aa28.27■■■□□ 2.12
CPNE1-202ENST00000352393 IARSP41252 1262 aaKnown RBP28.27■■■□□ 2.12
CPNE1-202ENST00000352393 CLIC6Q96NY7 704 aa28.27■■■□□ 2.12
CPNE1-202ENST00000352393 TMX1Q9H3N1 280 aa28.27■■■□□ 2.12
CPNE1-202ENST00000352393 ANKRD18BA2A2Z9 1011 aa28.27■■■□□ 2.12
CPNE1-202ENST00000352393 CCP110O43303 1012 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms